Cyprinodon variegatus (sheepshead minnow): 107090817
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Entry
107090817 CDS
T06110
Name
(RefSeq) lamin-A-like isoform X1
KO
K12641
lamin A/C
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04210
Apoptosis
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107090817
09142 Cell motility
04820 Cytoskeleton in muscle cells
107090817
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107090817
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
107090817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
LTD
GBR2_CC
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
107090817
NCBI-ProteinID:
XP_015239894
Ensembl:
ENSCVAG00000017134
UniProt:
A0A3Q2FZY2
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MATPKSSPRGGNTPLSPNRITRLQEKEDLCNLNDRLAIYIDKVRSLEAENAGLRMRITES
ETEVTRELTGLKAAYETELADARKTLDSVAKERARLQLELGKVREEHKELKARNTKKESE
LAAALQRLKDLEALLNSKDASLTTALGEKRNLDAENRDLKAQVAKLENSLGDAKKQLQDE
MLRRVDGENRIQTLKEELDFQKNLHSEELREIKRRHESRMVELDSGHQQEFESKLSEALA
EMRSQHELQVQLYKEEIEKTYNAKLESARQTADRSSHLVGAAHEELQQTRTRLESTSVQL
SQLQKQLAAREAKLRELEDALSRERDTTRRLLGEKDREMAEMRQRMQQQLDEYQELLDVK
LALDMEICAYRKLLEGEEERLRLSPSPPPTRVTGSRSSASIGHSRSILGSARSSPAKRRR
PNDTDSEASSFTGGAVARTRITQQASASGRVTVDEVDLEGKYVRLSNKADEDQNLGNWQL
KRQIGSSSPIIFKFPAKFTLKAGQRVTIWASNAGGVHNPPSDLVWKTQPSWGTGDQFQTT
LISASGEEMAMRKVTRTQFEDEDEDMQVAHSTCADGEYNLRSRTVVCGSCGLPSDKSSNC
SVSSASRSFRSGGLSEGLVPHSYVFNTSTPRKTGSRMESCPIM
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccacacccaaaagctcacccagaggcggaaacacccctctgtccccgaaccgcatc
actcggctccaggagaaggaggacctctgcaacctcaacgaccgcctggccatttacatc
gacaaagtgcgctctctggaggcggagaacgccggcctgcgcatgcgcatcaccgagtcc
gagaccgaggtgacccgggagctgacgggcctgaaggccgcctacgagacggagctggcc
gacgcccgcaagactctggactcggtggccaaagagagagcgagactccagctggagctg
ggcaaagtgagggaggagcacaaggagctgaaagccaggaacaccaagaaggagtcggag
ctggcagcagccttgcagaggctcaaggacctggaggctctcctgaactccaaagacgcc
tctctgacaacggcgctgggagagaaacggaacctggatgctgagaaccgggacctgaag
gcccaggtggctaagctggaaaacagtttgggagatgccaagaagcagctgcaggacgag
atgctgcggagggtggatggagagaaccggatccagactctcaaagaggagctggacttt
cagaagaaccttcactctgaggagctgcgggagataaaaaggcgccacgagtcccggatg
gtggagctggacagcggccaccagcaggagtttgagagcaaactgtcggaagcgctggca
gagatgcgcagtcagcacgagctgcaggttcagctctacaaggaggaaatagagaagacc
tacaatgcaaagctggaaagcgctcgtcagacggcggacaggagcagccacctggtggga
gctgcacatgaggagctgcagcagacgcggacccgcctggagtccacatctgttcagctc
agccagctgcagaaacagctggcagctcgcgaggcgaagctgagggaactggaggacgct
ctgtccagggagcgggacaccacccgccgcctgctgggggagaaggaccgggagatggcg
gagatgaggcagcgcatgcagcagcagctggatgagtaccaggagctgctggacgtgaag
ctggctctggacatggagatatgtgcctacaggaagctcctggagggcgaggaggagagg
ctgcgcctctcccccagcccccctcccaccagagtgacaggaagtcgctcctccgcttcc
attggtcactctcgctccatcctcggcagcgctcgcagctcccccgccaagaggcgccgc
cccaacgacaccgacagcgaggcgtccagcttcaccggcggagctgttgcccgtacccgc
attacccagcaggcctcggccagcggccgggtcactgtggacgaggtggacctggagggg
aagtatgtccgcctcagcaacaaagcagatgaggatcagaatttggggaactggcagctg
aagcggcagattggatccagctctcccatcatcttcaagtttccagctaagttcaccctg
aaggccggccaaagagtcacgatctgggcatctaacgctggaggggtccacaatcctcct
tcagacctggtgtggaagactcagccttcctggggaaccggggaccagttccagaccacg
ctgattagcgccagtggagaggagatggctatgaggaaggtaacccgcactcagtttgaa
gatgaagatgaagacatgcaggtggctcacagcacctgcgcagacggcgaatacaacctg
cgcagccgaaccgtggtctgcggctcgtgcggactcccgtcagacaagtccagcaactgc
tccgtgtcgtctgcgtcccgctcgttccgcagcggagggctctccgagggactagtgccg
cattcctacgtgttcaacacgagcacacctcgcaagactggatccaggatggagagctgt
ccgatcatgtga
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