Cyprinodon variegatus (sheepshead minnow): 107090835
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Entry
107090835 CDS
T06110
Name
(RefSeq) epiplakin-like
KO
K28085
epiplakin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
107090835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plectin
Sld3_N
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
107090835
NCBI-ProteinID:
XP_015239912
LinkDB
All DBs
Position
Unknown
AA seq
2128 aa
AA seq
DB search
MKSIEQNATAKQNGCEVHEPVAGIFLEKTGEKITIYQAMKQRLLKPGTALALLEAQVATV
GIIDPIGNRILPVADAVKEGVVGSEMREKLLSAEKAISGYIDPYTNQMISVYQAMQKDVV
PRDYGLRLLEAQIATKGIFDPVEKTTLSVDDAIQKGLYEKSLISDQMSELRVFYNPSTQE
NLNYRGLLERCTVESDTGLTLLPVCIAFKGLRKGISSSELLASKIIDQKTYEDLKTGKTT
TQDVMLMETVKEYLEGKGSIAGIADLSNGQRMSIYQAMKQGILMPGTALVLLEAQAATGF
MIDPVENKKYTVDEAIKHKLVGPEYHLKLRSAERAVTGYKDPYSGDTVSLFQAMSKDLIV
KEHGIRLLEAQIATGGIIDPINSHRLPTQVAFKRGFFDAEMNEILEDEGDDTKGFFDPNT
EENLTYLQLIERCVIDPVTGLCLLPLHDKTGKFNSSFIDYITKTVFKTEKVKVACGKYMG
MEVSLWELLMSEYFDEQQRTDIFLKYREGKVNIETIKKIVLQTIETSVKSTKTVFGGIRE
SVTAKQLVEAEIISKDVLEDLEKGRKSVKDVMEDENINVYLQGKDSIAGILLPDSQIMTI
YQARQKGKLMPGTALILLEAQAATGFIIDPIGNRKFSVDDAVKAKVVGPDVCHKLRSAER
AVTGYKDPHDGKIISLFQAMQKDLIVKDHGIRLLEAQIATGGIIDPVNSHRIPVHVAYKR
GYFSEEMNQILSDPSDDTKGFFDPNTHENLTYLQLMARCVKDPSTGLCLLPLKGKGRKIN
IDDKMREAFQRTTINVKYGRFKGSTTLWEAINSEYLSEDRRQEYFKLYKSRKITIEQLTL
IIIEIIESKEIKQQEELNFRSLRGEVSVVDLLDLEIVDDKTYHNLIDGKMSSSDLMKMES
VRAYLQGTSCVAGLILQPSNQKLSIYEAQKMGILTPGTALCLLEAQAATGFIVDPLKNQK
LTVEEALKEMVISPQTYEKLLSAERAVTGYKDPYTGQKISLFQALKKDLIVKQHGIRLLE
AQIATGGIIDPLKCLHLPLEVAYRKGYFDAELNQILTDPTDDTKGFFDPKTQENLTYMEM
LSRCVKDKETGLLLLPLNDTPKTTKKTENTYTEMEIRQEFEKKFVTVSVGRFSGKSVSLW
DLIHSCYFTEEQQLEMIEKAKLRQMTTQNIITLVLSAIDKLENETLKVTTGLRKEVSAQQ
LLNSDIIDSAIFKQVKEGKLDFKEVCQKESVAKYLRGTESIAGIKIYPTQNVMSISKAKH
EDLLTPGIALVLLKAQSATGWVIDPVNNKFYSVDEAAKENVIGPDLHEQLLSAERAVTGY
KDPYTDGTISLFEAMKERLIERREGLLLLDAQIATGGIIDPNQSHRIPSHIAIKKGYLDE
ETHKLLLSPSDDAKGFFDPNTNENLSYLQLMSRCERDSKTGLLLLPLHKEESRVFHTDEQ
VELAFKNKSISLNVGKFKNKEVTVWELLLSEYITKEKREQLIQQYKTGVLKIEEIIEILT
VIITELSSKQRKFKGLRKQVSASELFESKIISKELFSQIIQGEVSEENVNKMESIQKYLG
ATNCIAGVRVESTKKVMSIYEAKSRGLLTPGTSLVLLEAQAATGFVIDPVNNKKLSVEEA
VSLGVVGKEWKNKLLSAERAVTGYKDPYTGNTISLFQALQKDLIVKDHGIRLLEAQIATG
GIIDPVHSHRVPVQVAYQRGYFDEEMNQILSDADDDTKGFFDPNTQENLTYLQLIERCAK
DPVTELNLLSIVKKGEFYFYIDEATKLILKSTTTTKAGGKYKGITVSLWDLLYSKYITEE
KRRDLVQQFKAGTITIERFLEIILTIIQQQTTTSTRTITTTITETTEDKTLKGIRKDVTV
SELVKSEIIDEKLYKEITSGNVTVAEVSEMASVRKYLEGTNSIAGVYIQSTKETLSIYEA
KSRGLLTPGTSLVLLEAQAATGFVIDPVNNKKLSVEEAVAQSVVGKEWKDKLLSAERAVT
GYKDPYTGNTISLFQALQKDLIVKDHGIRLLEAQIATGGIIDPVHSHRVPVQVAYQRGYF
DEEMNRILSDSGDDTKGFFDPNTKENLTYLQLIERCIIDPVTGLSLLVIVKKGEFYFYVD
EATKLILKSTTTTKAGGKYKGITVSLSD
NT seq
6384 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccatcgagcagaacgctacagcaaagcaaaatggatgtgaagtccatgaacct
gtggcaggcatatttctggagaagacaggagagaagatcacaatttatcaggcaatgaaa
caacgtttgcttaaaccagggactgcattagctctacttgaagcacaagttgccacagtg
ggtattatagatccgattggcaatcgaatacttcctgttgcagatgctgttaaagagggt
gttgttggttcagaaatgagggagaaactcctttctgcagagaaagccattagtgggtat
atagacccttacactaatcagatgatatcagtgtaccaggctatgcaaaaagatgtagtc
cccagagattatggattgaggctactggaagcacagatagccaccaagggtatctttgac
cctgtggagaagacaaccctttcagttgatgatgcaattcaaaagggtctttatgaaaag
tctttgatcagtgaccagatgtcagagctgagagtcttctacaatccaagcacacaagaa
aatcttaactaccgaggccttctggaaagatgcactgtggagtctgacactggcttaacg
cttcttcctgtctgcattgccttcaaaggtctgcgaaaaggcatttcctcaagtgaacta
ttagcgtcaaaaatcattgatcagaaaacctatgaagacttgaaaaccggaaaaaccacc
acgcaagatgtgatgttgatggaaactgtgaaagaatacctggaaggtaaaggcagtata
gcaggaattgctgatctttcaaatggccagagaatgagcatatatcaagccatgaagcaa
gggatactgatgccaggtacagctcttgttttgctggaagcacaagcagcaactgggttt
atgatcgatcctgtagaaaacaaaaagtacactgtagatgaagctattaagcacaaactt
gttggccctgaataccatttgaagcttcgttctgctgaacgagcggtaaccggatacaaa
gatccatattcaggagacactgtatccttgtttcaagcaatgtcaaaagatctcatcgtc
aaggaacatggaattcgacttctggaggcacaaattgcgacaggtgggataattgatcca
atcaacagccacaggcttcccacacaagtggccttcaagagaggcttttttgatgcagaa
atgaatgagatactagaagatgaaggagacgacacaaaaggattttttgatccaaacaca
gaagagaatttaacatacctccagctgatcgaaaggtgcgttatcgatcccgtcaccgga
ttgtgccttcttcctctacatgataagacagggaaatttaattctagctttatagattac
ataacaaaaacagtcttcaaaacggagaaggtcaaagtggcatgtgggaagtacatggga
atggaggtatctttgtgggaactactgatgtcagagtattttgatgaacagcagaggaca
gatatatttctgaaatacagggaaggaaaggtaaatattgagactatcaaaaaaatagtt
ttgcaaaccatagagacatctgtaaaatcaacaaaaactgtctttgggggcatcagggaa
tctgtcacagccaagcagcttgttgaagcagaaattatcagcaaggatgtgctggaggat
ctggaaaagggaagaaagtcggtaaaagatgtaatggaagatgaaaatataaatgtgtac
ttacagggaaaagacagcattgcaggtattctgcttccagattcccaaattatgactatc
taccaagcaagacaaaaaggaaagctaatgccagggacggctctgattctactggaggca
caggcagcaactggcttcattattgaccctattggaaacaggaagttttctgtggatgat
gctgtcaaagctaaggttgtgggaccagatgtttgtcacaagttgcggtcagcagagaga
gcagtgactggctataaagatccacatgatggaaaaataatttccctgttccaagcaatg
cagaaggacctgatcgtgaaagaccatgggattcgacttctagaggcacagattgccact
ggtggtatcattgacccagtaaacagccaccgaatccctgtgcacgtagcctataagaga
gggtacttcagtgaggagatgaatcagattttgagtgatccaagtgatgacaccaaaggt
ttctttgatccaaatacacatgagaacctgacatacttgcagctaatggccagatgtgtc
aaagatcccagtacaggcttgtgccttttacctctgaaaggcaaagggagaaaaataaat
attgatgacaagatgagagaggcttttcaaagaacgacaatcaatgtcaagtatggcaga
ttcaagggcagcacaactctgtgggaagcaattaattcagaatatctgtctgaggacaga
cgacaggagtatttcaaactttacaaatccaggaaaatcaccatagagcaactaacactt
attatcatagagataattgagagtaaggagataaagcagcaagaagagctcaacttcaga
agtctccgaggagaggtctctgttgtggatcttttggatcttgaaattgtggatgataaa
acataccacaatttaattgatggaaagatgtcaagtagtgatttaatgaagatggaaagt
gtccgagcttacctgcagggcacaagttgtgtagcaggtttgatactgcaaccctccaat
caaaagctaagcatctatgaggcacagaaaatgggtatcctcaccccaggcactgcccta
tgtctccttgaagcacaggcagctacaggatttattgtagatcctcttaaaaaccagaaa
cttacagtagaagaagcactgaaagaaatggtcattagtccacaaacatacgaaaagctg
ttgtcagcagagagggctgtcactgggtataaagatccttacacaggtcaaaagatctcc
ctattccaagccctaaaaaaggatcttattgtcaagcagcatggcattcgtttactcgag
gctcaaattgccactggcggcattattgatccattgaaatgccttcatttacctctagaa
gttgcatacaggaaaggttattttgatgcagaacttaatcaaatcttaacagaccccact
gatgacacaaagggcttttttgacccaaagacacaagaaaacctgacatacatggaaatg
ttgagtagatgtgtgaaagataaagaaactggactccttctcctgccactgaacgacaca
ccaaagactacgaaaaaaacagaaaacacctacacggaaatggaaataaggcaagagttt
gaaaagaaatttgtcactgtaagtgtgggacggttttcaggaaaatccgtttctctctgg
gacctgattcactcttgttattttactgaagaacagcagctggaaatgattgaaaaagca
aaattgaggcagatgaccacccaaaatataattacattagtgctctctgcaatcgacaaa
ctggagaacgaaaccctgaaagtgacaacgggactgagaaaagaggtctctgcacagcaa
cttctcaattctgatataattgactcagccatattcaaacaggttaaggaaggaaaactg
gactttaaagaagtatgccaaaaggaatccgttgcaaaataccttaggggaaccgaaagc
attgctggcatcaaaatttatccaactcagaatgtaatgagcatatctaaagcaaaacac
gaagatcttttgacacctggcattgcattggtactgctcaaagcacagtctgcaacagga
tgggtgattgatcctgtgaacaacaagttctattcagtcgatgaagctgcgaaagagaat
gtaattggaccagatctccatgagcagcttctttcagctgagcgtgctgtcactggctat
aaagatccttacacagatggcactataagcctatttgaggcaatgaaagaaagactgatt
gaaagaagggaaggtctccttcttcttgatgcacaaatcgctactggaggaataatcgac
ccaaatcaaagccacagaataccttctcatatagctataaaaaagggataccttgatgaa
gaaactcacaaacttttgttaagcccaagtgatgatgcaaagggcttctttgaccctaat
accaatgaaaatctatcatatcttcagctaatgagtcgatgtgagcgagattccaaaact
gggctgcttcttctgccactgcataaagaagagtccagggtgtttcacacagatgagcag
gtggagcttgcctttaaaaacaagagtatttccctaaatgtaggaaaattcaagaacaaa
gaagtaacagtgtgggagttgttgctttctgaatacatcacaaaagaaaagagggaacag
ctgatacaacagtacaaaacaggagttctgaaaatagaggaaataattgaaatcctcaca
gtaattattacagagctatcatccaaacaaagaaagttcaaaggactaagaaaacaagtt
tcagcaagtgaactgtttgagtcgaagattatctcaaaggaactattcagccaaattata
caaggcgaagtaagtgaggaaaatgtaaacaaaatggaatccattcagaagtaccttgga
gctacaaactgtatagcgggtgtcagagttgaatctacaaaaaaagttatgagcatctat
gaagctaaaagtagaggtctactgactcctggtacctctctggttctgttggaggcccaa
gctgccactggcttcgtcattgacccggtcaacaacaagaaactttctgtagaagaagct
gtttctctcggagtggtaggcaaagagtggaagaacaaactgctttcagcagaaagagca
gttacagggtacaaagacccctacaccgggaacacaatttctttgttccaggccttgcag
aaagacctaattgtcaaagatcacggaatccgtctccttgaagcacaaattgcaacagga
ggaataattgatccagtccacagtcacagagtgccagtacaggtggcataccaaagaggt
tactttgatgaagaaatgaaccaaattttatctgatgctgatgatgacaccaagggtttc
tttgaccccaatactcaagaaaaccttacctacctgcagctaattgaaagatgtgcaaaa
gatcctgttacagagctcaacttattatcaattgtaaaaaaaggagagttctacttctat
attgatgaggccacaaagctcattctcaagtctacaacaacaaccaaagctggcgggaaa
tacaaagggatcacagtttctctgtgggacttgctatactctaaatacatcacagaagaa
aagaggagggaccttgtccaacagttcaaagctggaacaatcaccattgaacgcttttta
gaaatcatcttgacaatcattcagcagcagaccacaacatccacgcgaaccatcaccaca
acaatcacagagaccactgaagacaaaacattaaagggcataagaaaggatgtaacagta
tctgagctggttaaatcagagattattgatgaaaaactttacaaggaaattacttctgga
aatgtcacagtggctgaagttagtgaaatggcgtcggtacgtaagtaccttgagggaacc
aacagcattgcaggagtatacattcagtccacaaaggagacactgagcatctatgaagcc
aaaagtagaggtctactgactcctggtacctccctggttctgttggaggcccaggctgcc
actggcttcgtcattgatccagtaaacaacaagaaactttctgtggaagaagctgtagct
caaagtgtggtgggcaaagaatggaaggacaaactgctttcagcagaaagagcagttaca
ggatacaaagacccctacaccgggaacacaatatccttgttccaggccttgcagaaagat
ctgattgtcaaagatcacggaatccgtctccttgaagcacaaattgcaacaggaggaata
attgatccagtccatagtcacagagtgccagtacaggtagcataccaaagaggttacttt
gatgaagaaatgaacaggattttatccgactcaggtgatgacaccaagggtttctttgac
cccaacactaaggagaatctcacctacctacagctgattgaaagatgcattatagatcct
gtcacaggtctcagtctgttggtcattgtcaagaaaggagagttctacttctacgttgat
gaggccacaaagctcattctcaagtctacaacaacaaccaaagctggcgggaaatacaaa
gggatcacagtttctctgtcggac
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integrated database retrieval system
