Cyprinodon variegatus (sheepshead minnow): 107090851
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Entry
107090851 CDS
T06110
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107090851 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107090851 (vps35)
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
107090851 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
FerA
Urb2
Motif
Other DBs
NCBI-GeneID:
107090851
NCBI-ProteinID:
XP_015239935
Ensembl:
ENSCVAG00000017325
UniProt:
A0A3Q2EAN4
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGR
KVADLYELVQYAGNIIPRLYLLITVGVVYVRSFPQSRKDILKDLVEMCRGVQHPLRGLFL
RNYLLQCTRNILPDDGEQVEGSEEMTGDINDSIDFVLLNFAEMNKLWVRMQHQGHSRDRE
KREKERQELRILVGTNLVRLSQLEGVNVDKFKQVVLPGVLEQVVNCRDSLAQEYLMECII
QVFPDEFHLQTLNPFLRSCAELHQHVNVKNIIIALIDRLALFAHREDGPGIPAEIKLFDI
FSQQVATVIQSRQDMPSEDIVSLQVSLINLAMKCYPERVDYVDKVLESTVEIFNKLNLEH
IATSSAVSKELTRLLKIPVDTYNNVLMVLQLKHFPPLFEYFDFESRKSMSCYVLSNTLES
NTIIVSQEQVDAILSLVSTLIQDQPDQPADDPDPEDFAEEQSLVGRFIHLFHSEDPDQQY
LILNTARKHFGAGGNQRIRYTLPPLVFAAYQLAFRYKANASADDKWEKKCQKIFSFAHQT
ISALIKAELSELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAA
ITLIIGTFERTKCFSEENHEPLRTQCALAASKLLKKPDQCRAVSICAHLFWSGRSTDKNG
EEIRDGKRVMECLKKALKIANQCMDSSLQVQLFIEILNRYICFYERENDAVTLQVLNQLI
QKIREDLPNLEASEETEQINKHFNNTLEHLRLQRESPESEGPAYEGLVL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgatgcctggataagaacaaactgatggatgctctgaagcatgcctccaacatg
ctgggtgagctgaggacctccatgctctctccaaagagctactatgagttatacatggcc
atctctgatgagctgcactatctggaggtttatctgaccgacgagtttgccaagggacgc
aaggtggcggatctgtacgagctggtccagtacgccgggaacatcatacccaggctctac
ctgctgatcacagtgggcgtggtctacgtccgctccttccctcagtctcgtaaagacatc
ctgaaggacctggtggagatgtgtcgcggggtccagcacccactcaggggtctgttcctg
aggaattacctgttgcagtgtacccggaacatcctacctgacgatggagagcaagtggag
gggtcagaggagatgactggagatattaatgactccatcgactttgtcctcctgaacttt
gctgaaatgaacaaactgtgggttcgaatgcagcatcaaggtcacagcagagaccgagag
aagagagaaaaagaacgacaggagcttaggatcctggtgggcaccaacctggttcgcctc
agtcagctggagggcgtcaatgtggacaaatttaaacaggttgtccttcctggcgtgctg
gagcaggttgtgaattgtagagattcgttggctcaggaatacctcatggagtgcatcatc
caggttttccccgatgagttccaccttcagacgctgaatcctttcctgcgttcctgcgct
gagctgcatcagcacgtcaacgtaaagaacatcatcatcgctctgattgacagacttgct
ctgtttgctcatagagaagatggtccaggcatcccggctgagatcaaattatttgacatt
ttctctcaacaagttgccaccgtcattcagtcccgccaggacatgccatcagaggacatc
gtgtctctacaagtgtctctcattaatctggccatgaagtgctaccctgagcgagtcgac
tacgtggacaaagttctggaaagcacagtggaaatatttaacaagctcaatttggaacac
atagcgaccagtagtgccgtgtccaaagaactgacccgtctcctgaagatcccagtggac
acctacaacaacgtgctgatggtgctgcagctcaagcacttcccgccactcttcgagtac
tttgactttgagtcccgtaagagcatgagttgttacgtcctgagcaacacgctggagtcc
aacaccatcatcgtttcacaggaacaggtggacgccatcttaagcttggtctccacactg
atccaagaccagccggaccagccagcggacgatcctgacccggaggactttgccgaggag
cagagcctggttggtcgcttcatccacctgttccactctgaggatcctgaccagcagtac
ctgatccttaacacggcccggaaacattttggtgctggggggaaccagaggatccgctac
acgctgcctcctctggtgtttgctgcctaccagctggcctttcggtacaaagccaacgcc
tcggcggacgacaagtgggagaagaaatgccagaagatcttctcctttgcccaccagacc
atcagcgctctcatcaaggccgagctctcagagctgcctctgcggctcttcctgcagggg
gcgctggccgctggtgaaattggctttgagaaccatgagaccgtggcgtacgagttcatg
tcgcaggccttttctctctatgaggatgagatcagtgactccaaagcccagctggcagcc
attaccctgatcatcggcacctttgagcggaccaaatgtttcagcgaggaaaaccacgag
cctctgaggactcagtgcgctctggctgcctcaaagctgttaaagaagccggatcagtgc
cgggccgtcagcatatgcgcccatctgttctggtcgggtcgcagcaccgacaaaaacggc
gaggagatccgggatgggaagcgggtgatggagtgtctgaagaaggccctgaagatcgcc
aaccagtgcatggattcctctctgcaagtccagctgttcattgagatcctgaaccgatac
atctgcttctacgagcgggagaacgatgcggtgactctccaggttctaaaccagctgatc
cagaagatcagggaagaccttcccaacctggaggccagtgaagaaacggaacagatcaac
aaacacttcaacaatacgctggagcatcttcgcctgcagagggagtctccagagtctgag
gggccggcttatgagggtctggtcctctga
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integrated database retrieval system
