Cyprinodon variegatus (sheepshead minnow): 107090854
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Entry
107090854 CDS
T06110
Symbol
lrfn5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107090854 (lrfn5)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
107090854 (lrfn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
Ig_2
LRR_9
Sp38
LRR_14
V-set
fn3
C2-set_2
LRR_Zer-1
DHU1_N
LRR_EndoS
LRRCT_2
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
107090854
NCBI-ProteinID:
XP_015239943
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MESFLVFLIVLGVAVKAHKVQICPKRCVCQMLNPNLATLCDKKGLLFVPPSIDRHTVEMR
LGDNFVTNIKRKDFANMTKLVDLTLSRNTIGSIAPYAFRDLENLRALHLDSNRLTRITND
TFSGMSKLHHLILNNNQLTHIHIGAFNDLTALEELDLSYNNLESAPWIAIQRMSNLHTLN
LDHNMLSLIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGIMGPSSFALSF
GGNPLRCNCELLWLRRLQREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVTLRCKARGDPDPIIHWIAPDGRLMSNSSRATVHTDGTLEILISTVKDSGSFTC
VASNPAGEAQQTVDLLITKLPHITNDTIAEQEPDPGSSDIATVTKTGAEAGGVPMGNAKT
SQEKKVVIAEATSTSALVKFNFHRSIPGIRMFQIQYNGTYDDSLVYRMIPPTTKNILVNN
LAAGTQYDLCVLAIYDDQVTSLTATRVIGCVHFTTEQQYLRCHFMQSQFLGGTIVVIIGG
IIVASVLAFIIFLIVRYRVCNQGEADKALEMGDIRSLSSDGQLQGCGIPKSLSKQVLRPE
KNDKECLRVALPPPEPTKQRPPVSLPTTKPSVPDCTVSSSAGSHSWHPASPGAPRPKRSG
APQKPPEARRAEAQTEVELNNMNRNNSSEVKMANTIGLPGPGQPQKWTAAPRGPRPHHAS
RHYMTVPAGGVRVNRRHSLNADSYRERCYVAYPKVGASLRSKRSLSMSGELPQLESTTNI
HRARDKLSRSEWLLESTL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggagtcattcctggtgttcctgatagtgcttggtgtggcggtgaaggcgcacaaagtt
cagatctgccctaagcgctgcgtctgccagatgctgaatcctaacctggcgactttgtgc
gacaagaaggggctgctgtttgtgccccctagcatcgacaggcacacggtggagatgcgg
ctcggcgataactttgtaaccaacataaaacgcaaagactttgccaacatgaccaagctg
gtggacctgaccctctctcgtaacaccattgggtctattgcaccgtatgccttcagagat
ctggagaacctccgagcccttcacttggacagcaacaggctaacccgcatcaccaatgac
accttcagcggcatgtctaaactccaccacctcattctcaacaacaaccagctcacgcac
atccacattggggccttcaatgacctaaccgccctggaagagctggacttatcctacaac
aacttggaaagtgccccctggatagccattcagagaatgtccaacctccatacgcttaac
ttagaccacaacatgctcagcttgattccagagggcaccttctctggactgcagaagctt
aaaaggctggatgtaacatccaacaagcttcagaagctcccacctgaccctgttttccaa
agagcaggtgtcttggcaacctccgggataatgggcccgtcttcgttcgcgctgagcttc
ggtggcaacccgctgaggtgtaactgcgagctgctttggcttcgaaggctgcagagggag
gatgatctggagacctgtgcttccccacagcacctggctgggcggtatttctggactgtg
tcagaggaagagttcctgtgtgagccgcctcttatcaccagacactcacaggagctgcga
gctttagaaggtcagagtgtgactcttcgctgcaaagccaggggtgaccccgacccaatc
atccactggatcgcccccgacggacgcctgatgtccaactcctccagagccacggtccac
acagacgggacgttggagatcctcatcagcaccgtcaaagactcaggttccttcacctgt
gtggcgtccaacccggccggggaggcccagcagacggtggatctgctcatcactaaactc
ccccacattaccaacgacaccatcgccgagcaggagccggaccccggatcttcagatatc
gccactgtgaccaagacgggggccgaggcgggaggggtgccgatggggaacgcaaagaca
agtcaggagaagaaggttgtaatcgcagaggccacctctacctcggccctggtcaagttc
aactttcacaggagcattcctggaatccgcatgtttcagatccagtataatggcacctat
gatgactcgctggtatacagaatgatccccccaaccactaagaacatcctggtgaacaac
ctggcggcaggcacgcagtacgatctgtgcgttttggccatctacgacgaccaggtcacc
tcgctgaccgccaccagggtgataggctgcgtccacttcaccaccgagcagcagtacctc
aggtgccacttcatgcagtcccagttccttggcgggaccatcgtagtcatcattggaggg
attatcgtggcgtctgtgctcgctttcatcatcttcctcattgtgcgttaccgagtgtgt
aaccaaggtgaagcagacaaggcactggagatgggggatatccgttcgctgagcagcgat
ggtcagctacagggctgtgggatccctaagtccctctccaaacaggttctgcgtccagag
aagaatgacaaggaatgcctcagagttgccctcccacctccagagccaaccaagcaacga
cctcctgtttctctaccaaccaccaaaccttcggttcccgactgcacggtgtcgtcgtct
gcaggcagccatagctggcacccggcctccccaggagcgccgaggcccaagcgctccgga
gctccacagaaacccccagaggcccgtcgagctgaagcccagacagaggttgagctcaac
aacatgaaccgcaataactcctcagaggtcaaaatggccaataccatcggtctcccaggg
cccggccaaccccagaaatggactgctgctccaagaggcccccgaccccaccacgcttcc
cggcattacatgactgtgcctgcaggaggtgtgagagtgaaccgcaggcactcccttaat
gcagactcgtacagagagcgctgctatgtggcctaccccaaagttggggccagcctgcgc
tccaagcgcagcctgtcgatgagcggagagcttccgcagctcgagagcacaacaaacatc
catcgagccagggacaaactatccaggtctgagtggctgctggagagcactttatga
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