Cyprinodon variegatus (sheepshead minnow): 107090871
Help
Entry
107090871 CDS
T06110
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107090871 (prpf39)
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107090871 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
HAT
TPR_MalT
TPR_12
TPR_15
ARM_TT21_5th
TPR_10
Motif
Other DBs
NCBI-GeneID:
107090871
NCBI-ProteinID:
XP_015239964
Ensembl:
ENSCVAG00000015635
UniProt:
A0A3Q2D3N2
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MLDTESTTMESNGNTYLPDLPAQPAAWPSDQVPPPPAPEGSDSSQNDLGQQQQINQQMNS
SELGSVDKAVEQFQIASASHFQEEHPPPPPPPPPPPAEEPDQAVQYTTESQPEAVMQDGS
QDGTEAQQLEDGMELEDPSKEGSQEPSVPTEPSLPSEFERLFKICEDSPEDFNAWVALLQ
YVEQENLLMAARKSFDVFFLRYPYCYGYWKKYADLEKKHGNIQVAEEVYRRGLQAIPLSV
DLWLHYLTFIKENSDPDDPETEGRIRASYEHAVLAAGTDFRSDRLWESYITWETEHQKLA
NVTTIYDRVLGIPTQLYSQHFQKFKDHVQGNHPKYFLSEEEFVQLRLELSKSSLSGMVAE
DGEANVPQEELPPGTEDLADPAKRVTEIENMRHKVIEVRQEIFNHNEHEVSKRWTFEEGI
KRPYFHVKALEKTQLNNWKEYLDFEIENGTPERVVVLFERCLIACALYEEFWIKYAKYLE
GFSTDGARHVYKKACTVHLPKKPSIHLRWAAFEEQQGQVEEARRILMTLEETIPSLAMVR
LRRVSLERRLGNLEQAEALLKEAMESAKTATESSFYAVKLARHMVKVQRSLSKAKKVLLD
AMEKDPTNSRLYLNLLELEFSGDVTQNQAEILACFDRALRSQLPLDSRIVFSQRKVEFLE
DFGSDINVLVAAYEEQQKLQKESDSLKRKAENGYDSSQEPDGKRQRMDDPSAVAANAMTD
MQANNSAYNYNWYQQQYGGWGQNSWGQYNQYAQYNQYYPPPPT
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgctggacactgagtccactactatggagagtaatgggaacacatatcttcctgacctt
cctgctcaaccagcagcctggccttcagaccaagtccctccaccaccagcgcccgaaggc
tcagattcttctcagaatgatcttgggcaacagcagcagataaaccaacaaatgaactcc
tctgagcttggatctgtggataaggctgttgagcagtttcagatcgccagtgcttctcat
ttccaagaagagcatccgcctccacccccgcccccacctccaccacctgcagaggaacca
gaccaagcagtgcagtatacgacagagtctcagccagaggctgttatgcaagatggaagt
caggatggtactgaagcacagcagttagaggatggcatggagcttgaagacccatccaaa
gaaggttcacaggaaccatctgttccaacagaaccaagcctaccctcagagtttgaaaga
ctctttaagatctgtgaagacagcccagaagactttaatgcctgggtggcattgctgcaa
tacgtggagcaagaaaatctccttatggctgcaagaaagtcgtttgatgtattcttccta
cgttatccttactgctatggctactggaaaaaatatgcagatcttgagaaaaagcacggc
aacatacaggttgcagaagaggtgtacagaagaggcttgcaggcgatccctctcagtgtg
gacctttggcttcactacctcacctttattaaagagaactctgatcctgacgatcctgag
acagagggccggatccgagcgtcatatgaacatgcagttcttgcagcaggcacagatttt
cgttctgaccgcctttgggaatcctacattacctgggaaacggaacaccagaaactggct
aacgtcaccactatctatgatcgtgtcttaggcatcccaactcagttgtattcccagcat
tttcagaagttcaaagatcacgtgcagggaaaccaccccaagtactttttgtcagaagag
gagtttgttcaacttagactggagctctctaaatctagcctgtcaggaatggttgctgaa
gatggagaagcaaacgttccacaggaggagctgccacctggtactgaggaccttgcagat
cccgctaagagggtgacagaaattgaaaacatgcgccacaaggtgattgaggttcggcag
gagatattcaaccacaacgagcatgaagtcagcaagcgctggacctttgaagaagggatc
aagcgaccttacttccacgtcaaagccttggagaagacacagctaaacaactggaaggag
tacttggactttgaaattgagaacgggaccccggagcgcgtggtggtcctctttgaacga
tgtctcatcgcctgtgccctctacgaggaattctggataaagtatgcaaaatatctagaa
ggcttcagtactgatggtgcgagacatgtatacaagaaggcttgcaccgtacatctgccc
aagaaaccctccattcaccttcgttgggcagcctttgaggagcagcaaggccaagtggaa
gaggctcgcagaatcctgatgaccttggaggaaacgatcccgagtctggccatggttcgt
cttcggagggtcagcctggagcgtcgcctcgggaacctggagcaggctgaggcactgttg
aaggaagcaatggagtctgcaaagactgctacagagtcatcattctatgctgtaaagctg
gcaagacacatggtgaaggtgcagagaagtctgagcaaggcaaagaaggtgcttcttgat
gctatggagaaagacccgacaaattccagactatatttaaacctgctggagctagagttt
agtggagacgtgacccagaatcaggcggagatcttggcttgttttgaccgggccctgagg
agccaattgcccctggactcccgcatcgtcttctcacagcgcaaagtcgaattcttagaa
gactttggcagtgacattaatgtgcttgtggctgcatatgaagaacaacaaaaactgcag
aaagaaagcgactctttaaaaaggaaggctgagaacggatatgacagctcccaagaacct
gatggcaaaaggcagagaatggatgatccctctgcagttgctgcaaatgcaatgactgac
atgcaggcaaacaactcggcatacaactacaactggtaccagcaacagtatggtggttgg
ggacaaaattcctgggggcagtacaaccagtatgcccagtacaaccaatactaccctcct
cctccaacatga
DBGET
integrated database retrieval system
