Cyprinodon variegatus (sheepshead minnow): 107090878
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Entry
107090878 CDS
T06110
Symbol
psma1
Name
(RefSeq) proteasome subunit alpha type-1
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107090878 (psma1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107090878 (psma1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cvg03051
]
107090878 (psma1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107090878 (psma1)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
107090878 (psma1)
Peptidases and inhibitors [BR:
cvg01002
]
Threonine peptidases
Family T1: proteasome family
107090878 (psma1)
Proteasome [BR:
cvg03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
107090878 (psma1)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107090878 (psma1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
107090878
NCBI-ProteinID:
XP_015239971
Ensembl:
ENSCVAG00000015276
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSRTHAVLVALKRAQSELAAHQ
KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPISRLVSLVGSKTQIPT
QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERTMDKFQ
DCNLNELVQHGLRALRETLPTEQDLTTKNVSIGIVGKDMEFTIYDDDDVAPFLEGLEERP
QRKVAQSAEEPAAGQASDEPMEH
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtaaccaatatgacaacgatgtgacagtatggagccctcagggtcgcatccat
cagatcgaatatgccatggaggcagttaaacaaggctctgcaactgtaggactgaaatcc
agaacacatgctgtccttgttgcactgaagagagcccagtctgaactggctgcccaccag
aagaagatcctacatgttgacaaccacattggcatctccatcgccggactgaccgccgac
gccaggctgctctgtaactttatgcgtcaggagtgtttggactcgaggttcgtctttgac
agaccacttcccatctcgcgtctcgtctcacttgttggcagcaaaacccagattcccaca
cagcggtacggaaggaggccttatggagtcgggctcctcattgccggctacgatgacatg
ggacctcacatctttcagacttgcccctcggcaaactactttgactgcaaagccatgtcc
atcggagcgcgctcccagtctgcacgtacctatttggagcggaccatggacaagttccaa
gactgtaacctgaatgaactggttcagcacggcctccgtgctcttagagaaacacttccc
actgagcaggacctcaccaccaagaacgtttccatcggcatcgtggggaaggacatggag
ttcaccatttatgacgatgacgacgtcgctcccttcctggaggggttggaggaaaggccg
cagagaaaggtggcccagtctgcagaggaacctgctgctggacaggcgtccgacgagcca
atggagcactga
DBGET
integrated database retrieval system
