Cyprinodon variegatus (sheepshead minnow): 107090976
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Entry
107090976 CDS
T06110
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107090976
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107090976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_11
TPR_16
TPR_12
HAT
HrpB1_HrpK
TPR_21
GAT
Motif
Other DBs
NCBI-GeneID:
107090976
NCBI-ProteinID:
XP_015240131
Ensembl:
ENSCVAG00000012241
UniProt:
A0A3Q2FTI1
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MAAEGCDEMSGNGMPEETSAMDVTEVAPPLPPPPPPPPPEVSEENGGSTDAPEASATPEN
CSTAPTATNKEGELPADFERLWKAAHDNPQDFTSWTDLLQYSEQEGHVVAYRRALEAFLV
RYPLCYGYWKKFTDLERRAADNNKAEEVCIRGLQVIPLSVDLWIHYINLLLGTLDMNLPD
SAVRIRSVFENAVAACGLDFHSDRLWVLYMEWEKEHGNLRNATAVMDRVLRVPTQRYNTH
YEMFKEHLNSHPPKDVLSSDEYEELRTLCRQSQKAERAEQSQEEEEERPPGEEEPSTPDG
ADSEELIQKIREQVLLRRDKVYQDNEEEVRKRWNYEDAIKRPYFHVRPLDRVQLRAWHTY
LDWEIAELNRDTRDPAQGDNTHDPNQESTEESEVPTQRPEASDDSATALQGDLRVRILFE
RCLIACALYEEFWTRYIQYLEPQSVDEARAVYRRACEVHLPNKPNIHMQWATFEERHGNL
TEARRILEALEKSVPGLAVVRIRRAALERRAGQLEQSEALLREAVAESKERPTLHAFYSI
KLARLLLKVVRNSDGARKVLQEALEISPDNEKLHLNLLDLELSGDPWASAEAVNECVTRA
LEAPLTSQTKLLLSQRGLQFTEEYSNSVQSVLSVYDAHQKLLDELGGTKREAENRDEDPE
KISKTDDGSSTAAQTASSMSQVPSSTAVAGTDTSAQAGYGAYSSWYQQPGYGSYGNYSNY
GSYGYQNNWNYNQTYYPPS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggctgcgatgagatgagcggtaacgggatgcctgaggagacttcagct
atggatgtcactgaggtggctccaccactgcccccaccgccgccgcctcctcctcctgaa
gtctcagaagagaatggcggctcgactgatgcccctgaggcttctgcaacccctgaaaac
tgctccacagctccaacagcaacaaataaggaaggcgaactacctgcagactttgagcgt
ctgtggaaagctgcgcatgacaatcctcaagacttcaccagctggaccgatctgctccag
tactctgagcaggagggtcatgttgtagcgtaccgtagagcactggaggccttcctcgtt
cggtatccactctgctacggctactggaagaaatttacagacttggagcgccgtgcagcg
gacaacaacaaagcagaagaggtgtgtattcgtggacttcaagttattcctttgagtgta
gatctttggatccactacatcaatctattgctgggaacattagacatgaacctgcctgac
tcagctgtacggattcgcagtgtgttcgagaacgccgttgctgcgtgcggtttggatttc
cattcagatcgtctgtgggttctctacatggagtgggaaaaagagcacggaaacctgagg
aacgccacggccgtcatggacagagtcctcagagttcctactcagcgctacaacacacac
tacgaaatgttcaaagagcacctgaacagccacccgcctaaagacgtgctctcctctgac
gagtacgaggagctgaggacgctctgccggcagagccagaaggcagagcgggctgaacag
tctcaggaggaggaggaggaaaggccgccaggagaggaagagccctctacacctgatggc
gcagactctgaggagctgattcaaaagataagggagcaggtgctgctccgaagggacaaa
gtttaccaagacaatgaggaagaggtccggaagagatggaactatgaagatgctatcaag
cgtccttatttccacgtcaggccactggaccgcgtccagctccgagcttggcacacctac
ttggactgggagatcgctgagctaaacagggacaccagagaccccgcacaaggcgacaac
acgcatgaccctaaccaggaatcaacagaggaatctgaggttccaacccagcgtccggaa
gcatcagatgattctgctacagccttgcagggtgacctcagagtccgcattctgtttgag
cgctgcctgatcgcatgcgcgctgtatgaggagttctggaccaggtacattcagtacctg
gagccgcagagtgtggacgaggcacgggccgtctacaggcgagcctgtgaggtccacctc
cctaacaaacctaatatccatatgcagtgggccacctttgaggagaggcatggtaatcta
accgaggcccggcgcatactggaggccctggagaaatcagttcctggtctggctgttgtg
cggatccgcagggcagctttagaacgacgagcagggcagctggagcagtcggaggctctg
ctgcgagaggcagtggctgaatccaaagagaggccgacgctgcacgctttctactccatc
aaactggcccgtctgctgcttaaagtggtccgaaactctgacggcgcccgcaaggtttta
caggaagccctggaaataagcccggataatgaaaagctacacttgaacctgttggacctg
gagttgtctggggacccctgggcttcagccgaggcggtgaacgagtgtgtgactcgagcc
ctggaggctcctctcacctcacaaaccaagttgcttctgtcacagagaggcctgcagttc
acagaggagtacagcaactctgttcagagcgtgctgtccgtctatgacgcgcatcagaag
ctgctggatgagctgggaggaacaaagagggaggcagagaacagggacgaggatccagag
aaaataagcaaaacagacgacggctcttccacagctgcacagacggcatccagcatgtcc
caggtgcccagtagcacggcggtggcgggaaccgacaccagcgcacaggccggatatgga
gcatacagcagctggtaccagcaaccaggctacggcagctacggtaactatagcaactac
ggcagctatggctaccagaacaactggaactacaaccagacctactatccgccaagttaa
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integrated database retrieval system
