Cyprinodon variegatus (sheepshead minnow): 107091083
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Entry
107091083 CDS
T06110
Symbol
map1a
Name
(RefSeq) microtubule-associated protein 1A isoform X1
KO
K10429
microtubule-associated protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107091083 (map1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107091083 (map1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107091083 (map1a)
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107091083 (map1a)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
107091083 (map1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAPB1_N
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
107091083
NCBI-ProteinID:
XP_015240296
LinkDB
All DBs
Position
Unknown
AA seq
2417 aa
AA seq
DB search
MEILPAGAVLEEQVEPEDSQHSGREAFRHRNYRMLIVIGEIPTDYHLEAARRQIVQGLLS
WNVDLSVCDLNKELQLFKTRHTAQFSPQVKGQRTLQYQNDVLQTVVLVNPSEETVCLETS
YLITDAATNKLLVLSGLSSDQGGDILLESGAFTWQHFSDIISNPQVIEVLSRASSELQSK
LTVSCQGDGGWSSLGQSQEQQPLLNSLEYRLNPEPHLPNMDGVTEFTEYVSETVDVPSPF
ELLEPPTSGGFLKLSKPCCYIFPGGRGDSALFAVNGFNILVDGGSERKACFWKLVRHLDR
IDSVLLTHIGADNLPGINGLFQRKIAEQEEEKNQGCGSSSNSDWMKNLISPELGIVFFNV
PEKLRMPESTMKVKRSIEEASLTLQYLNKLGITPEPLHRVVSNTIEPITLFHKLGVGKLD
MYILNPVKESKEMQFLMQKWAGNSKAKTGIMMSNGKEGEISVPYLTSVTALIIWIPHRPT
EKIVRVLFPGNAPQNKIFEGLEKLKHLDFLRYPVATQKDISSGAPPAIIKQTKIRSRTDS
KESLKSSPKPHAKASKKEASGQEEESKSEATKDNKVEKKEEKKPKSDSLKATKQQKNSEV
APGAEKIPKKKISKEKSTKKEKASKMDEKKDKEKKETKKEKVKKDENIRKEEKKESKAKD
DKKKDQGKPELRKITKPDLKPLTPEVRKTLHKAKGLAKPKSDKNKAVKDEANEKRPVPKN
ITEEVAAAALADRSIMSSPEDLTEDFEALKQEEISKQKTGFVHSDVIPVNSNTKVSSQAV
PDEKIMSTMEVKLVGSESPVTQEDNKSNQVLATQQKDVSHGFDKYEEEKTERCDFLKETV
SDRSKKSESSEEEGDVIEKAELEGTEDDEVMKIKTEEVKKEWDTKPAEQKTATAPLPVSA
SEQFSFIQDETIPGYSETEQTISDEEIHEEPEDKIPQLRYDVGSYEISVPDVPGTFESMH
GIKEMKSSVVCGAPDVKPKAIVGSQEPELAPYPAIIAAPLAEEEHISSATSITDYDRLSS
FATSVAEDQSIASVTAPQTEDIGRNSLLLETMNSAPSRAEAAQGKDYLHSAGTISPTSSL
EDDKCFKSPSSDEYQPNIPEIDSDAKTKTVHEEEDDEEDEDEDQTPNVDIPLGKLQEGYE
QATSLMHQELLKSPSTGIPSQPVKEDQTLIGAEEFKTTADVKTISPPPSFSPGLESRSRQ
DSEERCFSPDDSTMKLASPTQSVPTSSGYSPTEEKVLKAEEKDEGLTTAKAEIHKTDRSV
TISDNTSFIGLPGDKTAFEASEESDEDSEDDYYTKKELKPVLKAKLMEAKEGCFLDDDFE
GKCAKTEPGAQSSDKIQVSISTMEKTKPKVMFSDEDDEDDEKDGGSKILSDEKDQVEKTD
ITITESEKSVHFSLYECPEKESRERAVYTRQDTPYVHGKTFSYGDIYDSKTSSEESDLYR
EESQDKVEQVSSKTEADLHKDESPSQDMLSDKVLEKEVKEYSTSDWIESKSTSATDQLEK
EVKEKETFVYSQTSRFPSVADRPEASTTCLKSEEDHAPITKPPTFTSVTSGYSEKSACLE
IDMRKFTARDEEDYDDDEVLDDDEEEEEEDEDAIDSDTEKGAKEKSEKEAKSPVSEMLAS
NRPEFIVSMAGYSYNSQVKPSITETSSSSGTKAEDEAQAEFSCVNGKPVHAGATSLSSYS
SGFEDSYKKDLFMSSQSGDKDKIDSPFKSSEDGYYRSQKDSIEFEKQKTPDILSKSSLET
NFQYTTTAAAPGYSSSSAYSYSSSTSGSLSTSRQFGEELETPASAEPPFEYSSFKDEHSL
VMDSPFSSSAGAKDDYLEVSEKQITVTTTAESSSSLARFSPLSPFEEVKSFPAVSSATTT
QEKEHGAPIGGVSDKAPRSDCFYKPEWPEDTKLDTAAGFGASVGPFADFSMNKEAASAAL
FGVTSSPRPDIEGKHYFEETDSSEEEDEEAYLRKMTQKSPSTGPTSSLPFCDKPLAAAFS
GKTSDARPDSLGSYMSTPLQTTKSDTTNGPTEVCTSSTLPSAVTTGGALSASAKLESKEG
AAGYIRSSYEWEMPKPQMGMVPGDSPPHYRHDDEFEEECEMEPEHPPRPLSLASADQQFR
SPFFAEECSRGEQDDDDDDDDSDQDLPIGATSSYTSRTSPGYSSSEFRQRKEDLSPSFIN
PCMRQFSSDEHDKEEGHRSDQSQEGEEHDLSVKKRAHKQPHVQHTHCRDSSTLYQAGGMS
AGLCLATEDTPPTSVSESLPSQSESDLHPGTEEYPSVVGEGNMDSDEDGEYMPIDKSATG
RSSHHSASRSSHDPPPAPVLDPHPHPPHPDVCMVDPDTLANGSLKKEPKAKSLKKSSGKT
KSASPARRRRSPMPVKQTSPRSASLKKKDTDKSSRMSRLSDGQGSKDDDLSRSSYNVGKG
LTNGVKTSSGEQMQSKM
NT seq
7254 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcctcccggctggagcagtcttggaggagcaggttgaaccggaggactcgcaa
cacagtggtagagaagcattccggcacagaaactatcggatgctgattgtgattggagag
attccaacagattatcacctggaagctgctcggagacagattgtacaaggtttgctttcc
tggaatgttgatctgtccgtttgtgacctgaataaggagctgcagctttttaagaccaga
cacaccgctcagttttctcctcaagtcaaaggtcagagaactcttcagtaccagaatgat
gtccttcagactgtagtgttggtgaacccatcagaggaaaccgtttgtttagagacaagt
tatttgattactgacgctgctactaataagttgctcgttctgagcggcctgagttctgac
cagggaggtgacattcttctggaaagtggagctttcacttggcaacacttttctgatatc
atctctaaccctcaagtcattgaagtcctgtccagggcctcctcagagctccaatccaag
cttactgtttcttgccagggagacggaggctggagctccctgggccaaagccaggagcag
cagccactccttaatagtcttgaatatcgcttaaaccctgagccccatctacccaacatg
gatggagtcacagagttcacagaatatgtctcggaaacagtggatgtaccatcacctttc
gagcttctggagccaccaacctctggtgggtttctgaagctgtccaaaccttgctgctat
atatttcctggaggcaggggagactctgctctttttgccgtcaatggattcaacatcctt
gtggatggagggtcagagaggaaggcctgcttctggaagttagttcgacacctagatagg
atcgattcagtcctgctcactcacattggagcagacaacctgcctggaataaatgggttg
ttccaaagaaagattgcagagcaggaagaagaaaagaaccaggggtgtggttccagtagt
aatagtgactggatgaagaacttaatttcccctgagcttgggattgtgttttttaatgtc
cctgaaaagctaaggatgccagagtctacaatgaaggtaaagcggagcattgaagaagca
tctctcacattgcaatacctcaacaagcttggcataacaccagagcctcttcacagggta
gtcagcaacaccattgaaccaataacactgttccacaaacttggtgtgggaaagcttgat
atgtacatcttgaaccctgtaaaggaaagcaaagaaatgcagtttttgatgcaaaaatgg
gcagggaatagtaaagccaagacaggaatcatgatgtcgaatggaaaggaaggagaaatt
tctgtcccttatctaacttcggttactgctttaattatttggatcccacaccgacccaca
gaaaagatagtgcgcgttctgtttcctggaaatgcaccgcaaaataaaatctttgagggc
cttgagaagttaaaacacctggatttcctgcgatacccagtggccactcagaaagacata
tcatctggcgcaccacccgcaatcatcaagcaaactaaaataaggtcaagaacagacagc
aaagagagtctcaaatcttccccaaaacctcatgctaaagcttctaagaaagaagccagt
ggacaagaggaggagtcaaaaagtgaagccactaaagacaataaagttgagaagaaagag
gagaagaaacccaaaagtgacagtttaaaagccaccaaacagcaaaaaaacagtgaggtg
gctcctggggccgagaagataccaaaaaagaaaatttccaaggaaaaatctacaaaaaaa
gagaaagcatctaagatggatgaaaagaaagacaaggagaagaaggaaaccaaaaaagaa
aaggtaaagaaagatgagaatataaggaaggaagagaaaaaggagagcaaggcaaaggat
gacaaaaagaaagaccaaggtaaaccggagctgagaaaaatcaccaagcctgacctgaag
ccgctcacccctgaagtgagaaaaactctgcataaggccaagggtctggctaagccgaag
tctgacaaaaataaagctgttaaagatgaagcaaacgagaaaaggccagttccaaagaac
atcactgaagaggtcgcagcagcagctctggctgataggtccatcatgtcctcaccagaa
gacctcactgaggactttgaggctctaaaacaagaggagatttccaaacagaagacaggg
tttgtccatagtgatgtaattccagtcaactcaaatactaaagtttcttctcaagctgtg
cccgatgagaaaataatgtccaccatggaggttaagcttgttggatctgaatcccctgtt
actcaagaagacaacaaaagcaatcaagttctggctactcaacaaaaagatgtgagtcat
ggctttgacaagtatgaagaggagaaaacagagagatgtgactttttaaaagaaaccgtg
agtgacagatccaagaaaagtgagagctcagaggaggagggtgatgtgattgagaaagct
gaactagaagggacagaagatgatgaggtcatgaaaataaaaacagaggaggtgaaaaag
gagtgggacaccaaaccagctgagcaaaaaacagccactgcacctctaccagtctctgcc
tctgaacagttttccttcatccaagatgagaccatccctggatactcagagacagagcag
acaatttctgatgaggagattcacgaggaacctgaagacaagatcccacagctgcgttac
gatgtgggttcctatgaaatttctgttccagatgttccaggtacatttgaatccatgcac
gggattaaagagatgaagagttctgtagtttgtggtgctccagatgtcaaacctaaagct
attgtgggaagtcaggagcctgagcttgcaccatatcctgccatcattgctgctcctctt
gcagaagaggagcatatctcttctgcaacatctatcacagactatgacagactatcatct
tttgctacctctgtggctgaggaccaatcaattgcctctgttacggcacctcagacagaa
gacatcgggaggaattccctcttgttggaaaccatgaacagtgctccatcacgtgcggag
gctgcccaagggaaagactatctccattcagcaggtaccatatctcccacctcctccctg
gaggatgacaagtgctttaaatctccgtcctctgatgaatatcaacccaacattccagag
atagatagtgatgcaaagaccaaaacagtccatgaagaagaagatgatgaggaagatgag
gatgaagaccaaactccaaatgttgacattcccctgggaaaacttcaagagggctatgaa
caagctacctccttgatgcaccaagaattactgaaatctccctccactggcattccttca
cagcctgtcaaggaagaccagactctaattggtgcagaagaattcaagaccactgctgat
gtaaaaactatctcaccccctccatctttctctcctgggctagagtccaggtccaggcag
gacagtgaggagagatgctttagtcctgatgatagtaccatgaaattggcctcacccaca
cagtcagtgcccacaagcagtggctactctccaacagaagaaaaggttttaaaagcagaa
gaaaaagatgagggactgacgactgctaaggctgaaatacataaaactgacagatcggtt
accatctcagataatacctcctttattggcttgccaggtgacaaaacagctttcgaagca
tctgaggaatcagatgaggacagtgaggatgactattacaccaaaaaggagttaaagcct
gttttaaaagctaaactcatggaagcaaaagagggttgctttttagatgatgactttgaa
gggaaatgtgcaaagacagaaccgggagctcagagttcagacaagatacaagtgtccatt
agcactatggaaaaaaccaaaccaaaagtgatgttttctgatgaagacgatgaagacgat
gaaaaggatggcggctctaaaatcctttcagatgaaaaagaccaagtggagaaaactgat
attaccatcacagagtcagagaaaagtgtccatttcagtctttatgaatgtccagagaaa
gagagccgagagagggcagtgtatacaagacaggacacaccatatgtccatggcaaaaca
ttctcttatggtgatatttatgacagcaaaacaagctcggaggagtctgatttgtatcga
gaagagtctcaagataaggtagagcaagtatcttcaaagactgaagcagatttgcacaaa
gatgaatctccatcacaagacatgttatcggacaaggtgttagaaaaagaagtaaaagag
tattccacctctgattggattgagtctaagagtacatcagccacagatcaacttgaaaaa
gaggtgaaagaaaaagaaacatttgtttatagtcagactagtcgtttcccttcagtggct
gacagacctgaagcttcaaccacttgtttaaagtcagaagaggatcatgctcccatcaca
aagcccccgactttcacctcagtcacatccggctacagcgagaaaagtgcatgtttagag
attgatatgcggaaatttacagcaagggatgaagaggattatgatgatgatgaagttctt
gatgacgatgaggaggaggaagaggaggatgaagatgcaattgattctgacactgagaaa
ggtgccaaagagaaatctgagaaagaagcaaaaagtccagttagtgaaatgctagcctca
aaccgacctgaattcatcgtttctatggcgggatacagttacaacagtcaagtaaagcca
agcattacagaaaccagttcaagttcaggaaccaaggctgaagatgaagcccaggctgag
ttctcctgtgtcaatggaaaaccagttcatgcaggagctaccagtttgtctagctactcc
tcaggttttgaagattcgtacaagaaagacttgtttatgtcaagtcagagtggagacaaa
gataaaatagattctccttttaaatcaagtgaggatggctactatcgaagccaaaaagac
agcattgaatttgagaaacaaaagacaccagatattctgagtaagagctcattggaaaca
aactttcagtacacaaccacagctgctgccccgggctactcatcttcttcagcatacagc
tactcatcctccacctcaggctcactatccactagccgacagtttggagaggagctagag
acacctgcgtctgccgagcctccctttgagtattcctcatttaaagatgaacactcgctt
gtcatggattctcctttctccagctcagctggcgctaaagatgattatcttgaagtctct
gagaagcaaatcactgtaacaaccacggcagagtccagctcgagtttagctcgcttctca
cccctcagtccttttgaggaggtcaaatcctttccagctgtctcatctgcaactacaact
caagagaaggaacatggagctccgataggtggagtttctgataaagcacctcgatcggac
tgcttctataagcctgaatggcctgaggatacaaagctggacacagctgctgggtttggg
gcctctgtgggtcctttcgcagacttctcaatgaataaagaggcagccagtgctgctttg
tttggcgtaacttcctctcctcgacctgacattgaaggcaaacattactttgaggagact
gatagcagtgaggaggaggatgaggaggcatatctgcgtaaaatgacccagaagtctcct
tccactggtcctacaagtagccttccattttgtgataagccattggctgcagccttcagt
ggaaagacaagtgatgcacgtccagattctcttggctcttacatgtcgacaccacttcag
accactaagtcagacacaacaaatggcccgacagaggtatgcacaagtagtacccttcct
tctgcggtaacgacaggtggagcactttcagcatcagctaaattggagtccaaagaggga
gcagcaggttacattcggagttcctatgagtgggaaatgcctaagcctcaaatggggatg
gtgcctggagactcccctcctcattaccgccatgatgatgagtttgaggaggaatgtgag
atggagccagagcacccccctcgcccactttcccttgcctctgctgatcagcagtttcgc
tcaccattctttgcagaagagtgtagccgaggtgagcaggatgatgatgatgatgatgat
gacagtgatcaagacctacccataggagcaacctcttcttacaccagccgcacctcccct
ggatactcatcttctgaattcaggcagcgtaaagaagacttgtcgccatccttcatcaac
ccctgcatgaggcagttttctagtgacgagcatgacaaagaggaaggccacagaagtgat
cagtcacaggagggagaagaacacgacctatcagtcaagaagagagctcacaaacaaccc
catgttcaacacactcattgcagagacagcagcactctgtaccaggctggtggtatgtct
gcagggctgtgtctggccacagaggacaccccgcctacctctgtcagcgagtctctaccc
tctcagtcagagtcagatctgcatcctggtactgaagagtacccctcagttgttggtgaa
ggcaacatggactcagacgaggatggagaatatatgccgattgataaatctgctaccggt
cgaagtagccatcattctgcttccaggagtagccatgaccctcctcctgcaccagtattg
gacccacatcctcaccctccacacccagatgtctgcatggtggatcctgacactttagct
aatggttctctgaagaaggaaccaaaagcaaaaagcctaaaaaaatcttcaggaaaaaca
aaatcagcatctcctgccaggcgtaggaggtctcccatgcctgtaaaacagacctcacca
cggagcgcctctctgaagaaaaaggacaccgacaagagctcacgtatgtctcgtctgtcg
gacggacaaggctcaaaagacgatgacctctccagatccagctataacgttggcaaaggg
ctgacaaatggtgtcaaaaccagctcaggtgagcaaatgcaaagtaaaatgtaa
DBGET
integrated database retrieval system
