Cyprinodon variegatus (sheepshead minnow): 107091223
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Entry
107091223 CDS
T06110
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107091223 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvg01002
]
107091223 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107091223 (usp30)
04121 Ubiquitin system [BR:
cvg04121
]
107091223 (usp30)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107091223 (usp30)
Peptidases and inhibitors [BR:
cvg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107091223 (usp30)
Membrane trafficking [BR:
cvg04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
107091223 (usp30)
Ubiquitin system [BR:
cvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107091223 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Arabinose_trans
Motif
Other DBs
NCBI-GeneID:
107091223
NCBI-ProteinID:
XP_015240508
Ensembl:
ENSCVAG00000022691
UniProt:
A0A3Q2EJK0
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MDTGMLWCRLENTDKLVGEFLGTGPTVRNKMIKNWGVVGGIAAAIAAGAYVLWGPITERK
KRKRGMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEKFSGLPSIQSCKDNQLSSTLLQL
LKALSSEEPGDEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERNRQPKV
THLFDMQSLESLPDEDAKAFACISRAAPLHPIPGPWKFQHPFHGRLTSNMSCKRCEIQSP
VRYDSFESLSLSIPLPQWGRPLSLDQCLQHFISSETIKEVECENCTKIQQSTTRNGQIFE
SQRTTFVKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVHFTEYLSMDRYKHNSTQRS
QRFTLAHKAKKTESLDTEESTERLRANGTDAEHHNNNKPFSNGTCSSVFLLSPGLNPQRG
FTYEFSSTEYLFKLTAVLVHHGDMHSGHFVTYRRSPAPPCSTSPFSSQWLWVSDDSVRKA
NLQEVLSSNAYMLFYERVRRPNLDGRSDE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggacactgggatgttgtggtgtcgactagagaacacggataagcttgtgggggagttt
cttggcacaggacccacagtcaggaacaagatgataaaaaactggggtgttgttggaggg
atcgctgctgcaattgcagctggagcatacgtcctgtggggcccgataactgagaggaag
aagcggaagagaggtatggtccctggtctgttgaacttggggaacacctgcttcctaaac
tctttgcttcagggtttggcagcgtgtccgtctttcatcagatggctggagaagttttca
ggtctgccctcgatccagtcatgcaaagacaaccagctgtcttcaacactgctgcagctg
ctcaaagctctgtccagtgaggagccgggagacgaggatgttcttgatgcaggatgcctt
ttggatgttctcagactgtaccgctggcacatcagctcatttgaggagcaggatgcacat
gaactttttcacgtcctcacatcttcactagaggaggagagaaacaggcaacccaaagtc
acacatctgtttgatatgcagtcccttgagtctcttcctgatgaagatgccaaagctttt
gcctgcataagcagagcagctcctcttcatccgatcccgggtccctggaaattccagcat
ccctttcacggtcgtctaacgagcaacatgtcgtgcaagcgctgtgaaattcagagtcca
gtacgatacgactcatttgagagcctctctctgtccatccctcttcctcagtggggtcgg
cctctctctctagatcagtgtttgcagcattttatttcatcggaaacaatcaaagaggtg
gagtgtgaaaactgtacaaagattcaacaaagcacaacgagaaacgggcaaattttcgaa
agccagaggacgacatttgtcaaacagctgaaacttggaaagctccctcagtgcctctgt
atccatctgcaaagactgacatggtccagcgaaggaacccccatcaagcggcaggagcac
gtccacttcacagagtatctatcaatggatcgttataaacacaactccacacagaggagt
cagcggttcacattggcccataaagccaaaaagacagaaagtttggacacagaagagtcc
acagaaaggcttagagctaatgggactgatgcagaacatcataacaacaacaaacctttt
tctaatggaacctgttcctccgtatttcttctctcccctggtttgaatccacagcgcggc
ttcacgtatgaattcagctccacagagtatttattcaagctgacggcagtgttggttcac
catggtgacatgcactcgggacattttgtcacctatcgtcgaagccccgccccaccctgc
agcacctcgccgttcagctctcagtggctttgggtgtcagacgattctgtgcggaaagcc
aacctgcaggaggtgctgtcttccaacgcgtacatgctcttctacgaaagagtgcgaagg
ccaaacctcgatggacgatcggacgagtga
DBGET
integrated database retrieval system