Cyprinodon variegatus (sheepshead minnow): 107091241
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Entry
107091241 CDS
T06110
Symbol
sart3
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107091241 (sart3)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107091241 (sart3)
Spliceosome [BR:
cvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107091241 (sart3)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
107091241 (sart3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
RRM_10
FAT
DUF1993
Lsm_interact
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
107091241
NCBI-ProteinID:
XP_015240538
Ensembl:
ENSCVAG00000022898
UniProt:
A0A3Q2DJ75
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MAAPSNAEQTQLQDMEEEEAEMEERDMESDEEEGMGLENSEDEEDDSSEDDKENEAEIQR
LEEQLSINAFDYNCHVDLIKLLKQEGELLRLRKARQKMSELFPLTEEIWLDWLKDEIRLS
EEDSNREKVYELFERAVKDYICPEIWLEYAQYSIGGMGSPGGIDKVRSIFERAVTAVGLH
MTKGQMLWEAYREFENAVLSTVQPPPGRIPSREEQERLSTQLERIHTLFRRQLAIPLMDM
ETTYAEYEEWSEKGVPDTVVHLYRKALQQNEKCKSYEEALLVAEPPKLAEYQAYIDFELK
EGDPARVQILFERALAENCLVPDMWTKYTTYLDRQLKIKDLVLSTHERAVRNCPWTMSLW
KSYLQALERHGADHQIVSDVFEKALNAGFIQATDYVEIWQAFLDYLRRRVDFSKESSKEL
EELRAAFARSLEYLKQDVEERFGESGDPSCVIMQIWARIEAHHCKNMQKARELWDNIMTK
GNAKYANMWLEYYNLERAYGDMAHCRKALHRAVQCTSDYPEHVCEVLLTFERVEGTLEDW
DTAVQKTETRLNRINEQRAKAAEKETNMARQEEEKMEQRRKAKAEKKNQKKGQRATRGGE
KRKAEQDDYQEDWNEESAPKRQKGNGDNTEEYMETETGGRNAPPGYKPTQDGAKNAQQGA
VAAAQRQNDDKPELRDDSCSVFISNLAYTLEDPEPKLKALFESCGPIRQVRLVTSNRGNF
KGYGYVQFESVVSVAEALKMDRKELEGRPMFVSPCVDKNKNPEFKVFKYNTSMEKHKIFI
SGLPFSCTKEQLEEICKNHGTIKDVRLVTYRSGKPKGLAYVEFADEKQASQAVLKLDGID
VEGNKITVAISNPPRRNPMDKPGSSRPMGDIMPHQVYGSRGRGRTQLSLLPRSLHRQTAP
PGKVENGTTAEREAPPTGSAAANAAGESRSLSNSDFAKMLLNK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccaagcaacgcagagcaaacgcagttgcaagatatggaggaggaagaagcg
gagatggaggaaagggatatggagtcggacgaagaggagggcatggggttagaaaactct
gaagacgaagaggacgactcgtcagaggatgacaaggaaaatgaagccgaaatccagcgg
ttggaggagcagctttcgatcaatgcctttgactacaactgccatgtggacctcatcaaa
ctcctcaagcaggagggagaacttctccgcttgcgaaaggcaagacagaagatgagtgaa
ctgttccctctaactgaagagatctggcttgactggctcaaggatgagattcgcttgtca
gaggaggattcaaaccgagagaaagtgtatgagctgtttgagagagctgtgaaagactac
atctgtccagaaatttggctggaatatgcccagtattcaattgggggcatggggtcacca
ggtgggatagacaaggtgagatccatctttgagcgggcggtgaccgcggtcgggcttcac
atgaccaagggacagatgctgtgggaagcatacagagagtttgagaacgcagttttgtcc
acagtgcagcctccccctggcaggattcccagccgtgaggagcaggagcggctcagcact
cagctcgagcgtattcatacgctctttcgccgccagctggccattcccctcatggacatg
gagactacctatgcagagtatgaggagtggtcagaaaagggagtccctgatacggtcgtc
catctgtacagaaaggctttgcagcagaacgaaaagtgtaaatcttatgaagaggccttg
ttggtagcagaacctcccaaattggccgaatatcaagcttacattgactttgagctgaag
gagggcgacccagcacgcgtccagatcctgtttgaacgggctttggctgagaactgcctg
gtaccagacatgtggactaaatacaccacatatctcgatcgtcagttgaagatcaaagat
ttggtcctgtccactcacgagcgagccgtcaggaactgtccctggaccatgagtctatgg
aagagctaccttcaggctctggagagacatggggcagaccatcagattgtatcagatgtt
tttgaaaaagccctaaatgctggtttcatccaagccacagattatgtagaaatatggcag
gcctttctcgactacctgagaagacgtgtggacttcagtaaagaatccagtaaagagttg
gaagagctacgtgctgccttcgctcggtctctagaatacctgaaacaagatgttgaagaa
cgttttggtgaaagtggcgacccttcttgtgtcatcatgcagatttgggctcggatagag
gctcatcactgcaagaacatgcagaaagcaagagaactgtgggataatatcatgactaaa
gggaatgccaaatatgccaacatgtggctggaatactataaccttgagagagcttatggg
gacatggctcactgcagaaaggctctccacagagcggttcagtgcacttcagattaccca
gaacacgtgtgtgaagtcctgctcacctttgagagggtagaaggtactttggaggactgg
gacacagcagtgcaaaagacagagacgaggctaaacaggataaacgagcagagagcaaag
gccgcagagaaagaaaccaacatggcacgtcaagaggaggagaaaatggagcagcgacgg
aaggccaaggcagaaaagaagaaccagaagaaaggccagagggcgactcgaggtggagag
aagagaaaagcagagcaggatgattatcaggaagactggaatgaagaatctgctcctaaa
aggcagaaaggaaacggtgacaacacagaagagtacatggagacagagactggaggaagg
aatgctcctcctggttataagcctactcaagatggagctaaaaatgcccagcagggggca
gtagctgctgcacagaggcagaatgatgacaaaccggagctgcgggatgacagctgcagc
gtgttcatcagtaacctggcgtacaccctggaggacccagagcccaagctaaaggcgctg
tttgagagctgcggccccatcaggcaggttcggctggtcaccagcaacagagggaacttc
aaaggttacggatatgtgcagtttgaatctgtagtctcagtggccgaagccctgaagatg
gacagaaaggagctggagggcagacctatgtttgtgtcaccctgtgtcgacaaaaacaaa
aatccagagtttaaggtgtttaagtacaacacatcgatggagaaacacaaaatcttcatc
tctgggctcccattctcgtgcactaaagagcaactggaggagatctgcaaaaatcacggc
accatcaaggatgttcgtctggtcacgtaccgatcagggaaacctaagggtctggcatat
gtcgagtttgcagatgaaaagcaggcttctcaggcagtgctgaaactagatggcatcgat
gtggaggggaacaaaatcactgttgccattagcaaccctccacgcagaaacccgatggat
aagcctggttccagcaggcccatgggagacataatgcctcatcaggtctacggctcgaga
gggagaggacgcactcaactttctctactccctcgctctctgcaccgtcaaacggcgcct
ccgggcaaggtggagaacgggaccacagccgagcgagaggcgccaccaacaggaagcgct
gcagccaatgcggccggagagtcgaggtctttgtcaaactcagactttgcaaagatgctt
ctcaataagtga
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integrated database retrieval system
