Cyprinodon variegatus (sheepshead minnow): 107091245
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Entry
107091245 CDS
T06110
Symbol
ssh1
Name
(RefSeq) protein phosphatase Slingshot homolog 1 isoform X1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107091245 (ssh1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107091245 (ssh1)
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107091245 (ssh1)
3.1.3.48 protein-tyrosine-phosphatase
107091245 (ssh1)
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
107091245 (ssh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Tc-R-P
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
107091245
NCBI-ProteinID:
XP_015240543
Ensembl:
ENSCVAG00000022767
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MALVTLQRSPTPSAASTASTATTTAGEDFGSEDERRVNQSLSESFFMVKGAALFLQQGSS
QQSQKAHPPHKHAGDLPQHLQVMINLLRSEDRIKLAVRLESAWSDRVRYMVVVYTSGRQD
TEENILLGFDFNNKDCKSCSIGMVLPLWSDTKIHLDGDGGFTVNTAGRTHVFKPVSVQAM
WSALQVLHKACEVSRRFNYFPGCMALTWMGYYESCIASEQSCINEWNAMKDLETTRPDSP
IMFVDKPSERERTECLIKSKLRSIMTSQDLENVTCKQIRTELEQHMNCNLKEYKEFIDNE
MLLILGQMDKATLIFDHVYLGSEWNASNLEELQETGVGYILNVTREIDNFFPGTFCYHNI
RVYDEEATDLLAHWNDTYNFIMKAKKNDSKCLVHCKMGVSRSASTVIAYAMKEYGWSLER
AYDFVKQKRNITRPNAGFMRQLAEYEGILDASKQRHNKLWHPDADCEMAEGQQGMAQCCG
GEDGGDPTAEPGMSPCSEEVSSDKGAVGHSPCRTVALDIDPAYNNYYFRRLSDSALDSEP
STPVRGPPLLGMEKVFIEIEDVERDALLDDEAFNGRDGLPLAHFGPVAEGTSAQTCSRGP
EPLEELRLRLEFNTVKEEDEEDVQKEEAEMEVLMQPDDKGGGAETHDEEVEGDAEGIGMD
LASLNENSNNNNHFSFRQNDNDEASSFLLHRDASVLSESYKKEHSFSSSELCLNPSPPSE
VQSASLLRSQTSCEGLSSSPGLLSPCVPTCDCANCAASAKVLLSIDEQPCISSLQKEETE
DRIHIKTKLPDIQSASDVLPELMKADFEDETPAVACHLGQQQESLMQLHRSGLVRRRAER
LERLTGMSFQECQKSKSCSSQSQEREDFSSFRGDFAKTSTPCQVRLEPLVVPLTNEALLG
VVGSGMLTPTSSPHGSTLTRSSSSDSLRSVRGKPGLVRQRAQEIETRMRLAGLTVPSRLK
RSNSLAKLGSLNLSCDDLCSTCSSDAGTLLLFSLSPEPDQGLEWDSPTTSSLSRPCKDLH
TPGKALPDEPKS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggtaacactgcagcggtctccgaccccgagcgccgcgtccaccgcaagcaca
gcaacgacgaccgcaggggaggactttgggagtgaagatgagcggcgagtgaatcagagt
ctgagtgagagcttcttcatggtgaagggcgccgctctcttcttgcagcaaggaagcagt
cagcagagccagaaagcacatcctcctcacaaacatgcaggtgacctaccgcaacacctg
caggtgatgataaaccttctccgctcagaggacagaatcaaactggcagtgcgtctggag
agtgcgtggtcagatcgtgttcggtacatggtggtggtgtatactagcggccggcaggac
acagaagagaacattcttttgggattcgacttcaacaacaaagactgtaaaagctgttca
atcggcatggtgctacctctttggagcgataccaagatccatctggatggagatgggggc
ttcactgtaaacacagcaggtcggactcatgtcttcaagcccgtgtcagtgcaggctatg
tggtcagcattgcaggtgctgcacaaagcgtgtgaggtatcacgaaggtttaactacttc
cctgggtgcatggccctcacctggatgggatactatgagagctgcattgcttccgagcag
agctgcatcaatgagtggaacgccatgaaggacttagaaaccacgcgcccagactcaccc
atcatgtttgttgacaaaccttcggagagggaaaggacagagtgccttatcaaatccaaa
cttagaagcataatgacatcccaggacctagagaacgtcacctgcaaacagatccgaaca
gagttggagcagcacatgaactgcaacttaaaagagtacaaggagttcattgacaatgag
atgctgctgatcctcggccagatggacaaagccactctcatttttgaccatgtctacctg
ggatctgaatggaatgcgtctaatttggaggagctgcaggagacaggggtgggctatatt
cttaacgttaccagggagatagacaacttcttcccagggactttctgttatcacaatatc
cgggtctacgatgaagaggccacggatctactggctcactggaacgacacgtataacttc
atcatgaaagcaaaaaagaacgactcaaagtgtctcgtccactgcaagatgggggtcagt
cgctctgcctccaccgtcattgcttatgccatgaaggaatacggctggtctctggagagg
gcgtatgactttgtgaagcagaagaggaacatcacacgacctaatgctggtttcatgagg
cagttggcagagtatgagggtattttagacgccagcaaacagcggcacaacaaactgtgg
cacccggatgcagactgtgagatggcagaaggtcagcagggaatggcgcagtgctgtgga
ggggaggatggaggggatcctactgcagaaccagggatgtctccttgctctgaggaggtg
tcatctgataaaggcgcagtgggacactctccatgcaggacagttgccctggacatcgac
cctgcctacaacaactactacttccgccggctctcggactcagctctggacagcgaacca
tcaactcctgtgcgcgggcctcctcttctcggtatggaaaaagtcttcatagagatagaa
gacgtagaaagagatgctttactggacgacgaggctttcaatggacgggatggcctcccg
ctcgctcactttggacccgtggctgagggcacctccgcacagacctgcagccgggggccc
gaacccctggaggagctgcggcttaggttggagttcaacactgtgaaggaggaggatgag
gaggatgtgcaaaaggaggaggcagagatggaggtgttaatgcagccggatgacaaagga
ggcggcgctgagacacatgatgaagaggttgagggggatgcagaagggattgggatggat
ctggcctcgctcaatgaaaattcaaacaacaacaaccatttcagctttcgacaaaacgac
aacgacgaagcttcctccttccttcttcacagagatgcttcagtactgtctgagtcttac
aagaaagagcattccttttcttcatctgagctttgccttaatcccagccctccgtccgaa
gtccaaagtgcttcattgcttcgttctcaaacatcctgtgaaggcctctcatcctcacca
ggactgcttagcccctgtgttcccacatgtgactgtgccaactgtgcagcctctgccaag
gttctgctctccatagatgaacagccatgcatcagctcactgcagaaagaggagactgag
gataggatccatataaagaccaagcttccagacatccagtctgcctcagatgttctcccc
gagttgatgaaagcagattttgaggatgagacacctgcagtggcttgtcatcttggccaa
cagcaggagagccttatgcagctgcatcgttcggggctggtccggcgccgagcggagagg
cttgagagacttacagggatgtccttccaggaatgccagaagtctaagagttgctcctct
caaagtcaggaaagggaggatttctccagctttagaggggattttgctaaaacttcaacc
ccatgccaagtgcggttagagccactggtagtgccactgaccaatgaagccttgttgggg
gtagtgggctcagggatgctcacgcccacctcctcaccacatggctccactctgacacgt
agctccagtagtgacagtctgcgcagcgtccgtggaaaacctggcctggtgcgtcaaagg
gcacaggagattgaaacccgaatgcggctggcgggtctaaccgtgccctcgaggctgaag
cggtccaactcgctagccaagttgggcagcctcaatctctcctgcgatgacctttgttcc
acttgttcttcagatgcagggacactgctgctcttctctctgtcccctgagccggaccaa
ggcctggagtgggactccccgaccacctcatcattgtccagaccctgcaaggacctgcat
actcctgggaaagcactcccagacgagcctaagagctga
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integrated database retrieval system
