Cyprinodon variegatus (sheepshead minnow): 107091416
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Entry
107091416 CDS
T06110
Symbol
srsf5
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040
Spliceosome
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107091416 (srsf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107091416 (srsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107091416 (srsf5)
Spliceosome [BR:
cvg03041
]
Common components
Common spliceosomal components
SR proteins
107091416 (srsf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
CDC45
Motif
Other DBs
NCBI-GeneID:
107091416
NCBI-ProteinID:
XP_015240823
Ensembl:
ENSCVAG00000016982
UniProt:
A0A3Q2GM83
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MSSRIFIGHLSTHARERDVEKFFKGYGHIKEINLKNGFGFVEFDDHRDADDAVYELNGKE
LCSERVTIEHARSRRGRGGGPPGMGRFGGGGGGGGGGGGGGFRQSRNTRARYGPPMRTDH
RLIVENLSSRVSWQDLKDLMRKAGEVTFVDAHRPTKNEGVVEFASRYDMKNAMSKLDGTE
LNGRKLKMFEDSRRSRSRSYSRSRSRSRSRSRSRSRSRSRSRSRSRSRSQSRTPEKKTSG
GSKPEAKSPSRSKSRSKSRSRSRSPAPVQNGNSGSRSRSRSRSRSRSRSASPDSKN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccggatcttcatcggccacctgagcacacacgctcgagagagagatgtggag
aagtttttcaagggatatggacacataaaagagataaatttgaaaaatggatttggtttc
gtggaatttgatgaccacagagatgctgacgatgctgtgtatgagttgaatgggaaagaa
ctgtgcagtgaaagggtcaccattgagcacgcccgctccaggagaggaagaggaggcggt
cctcctggaatgggacgttttggtggcggcggcggtggtggtggcggcggcggcggcggc
ggctttcgccaatcccgtaataccagagctaggtatggcccccccatgcgaacggatcac
aggctgattgtggagaacctctcatcccgggtcagctggcaggatctaaaagacctgatg
agaaaggcaggtgaagttacctttgtggatgcacaccgacccactaaaaacgaaggggtg
gtggagtttgcatctcgatatgatatgaagaatgccatgtctaaacttgatggaacggag
ctgaatgggcgaaaactgaagatgtttgaggacagtaggagaagccgttctcgcagctac
tcccgctccaggagccgctctaggagccgttccaggagtcgctccaggagccgcagtcgc
agccgctccaggagccgctccagatctcagagccgtaccccagagaagaaaacatcagga
gggagcaaacccgaagctaaatccccatccagatccaaatcccgctcaaaatcacgctcc
aggtctcgctctcccgctcctgttcaaaacggcaactccggctccagatcacgttcccgc
tctcgttcacgttcccgttcccgttcagcctcgccagacagcaaaaactaa
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