Cyprinodon variegatus (sheepshead minnow): 107091503
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Entry
107091503 CDS
T06110
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107091503 (tmf1)
Membrane trafficking [BR:
cvg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
107091503 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
CCDC39
Motif
Other DBs
NCBI-GeneID:
107091503
NCBI-ProteinID:
XP_015240947
Ensembl:
ENSCVAG00000013532
UniProt:
A0A3Q2FV93
LinkDB
All DBs
Position
Unknown
AA seq
1151 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIKEEDQWGDTVVMPYDDTSSPGKVTVSGGWG
MTQWEAPAEEKATTPPLTSEAITTPVTRTVVDESENFFSAFLSPGDAPVTNSKVVSIPPA
KTQRQTQEKEKKSKNEGAVLQIKNEDNTPEPEGPTEESIESQVVADSQQPEETKSALAAP
YADAILLQPVSPVSSPTDHPFSPDSTIDDVKTDTESVSAESKTQAEDPPEKQVETDSTNS
SEASEDKNSTPADNTIPASSKDVPSAQKDLKAEDRQNETPSPPVSAFSSGTSTTSDIEVL
DHESVLSESSASSRQETSESKTGLHLMQGSFQLLTASTCGDFARLEDYHKLTESCGSSSD
AFERIDSFSVQSLDSRSVSEVNSDDEVPGSRTLASVTAGPTPLSSTCEKQEDEVEESTDD
VKDAQEEGLVEAGKEQAVDEMEESGRSATPVNSEQPDELYGSVGDDTVFGSTCSAEEKGT
PPITEEMRSVSTSQILELQKVIDDLSSRLEKRESQLLAVSKDKARLDEECDNLKDEVMSL
KEESSNVQSLKDEFTQRIADAERKAQLACKERDIAKKEIKGLREELSTRLNSCDTMELIR
EKEEQIRGLLEEGEKLSKQQLQQSNIIKKLRVKEKESDSRITKQQKKIKEQEEELGHLQQ
VLDGKEEVEKQHRENIKRLNGVVEQQEKELNRLQTDVEELQEKNRSLQAALDNSYKELAE
LHKAHASKASEAQEAALSREIQAKEQLSLALEKAQEEARVQQEALANQVADLRIALQRAE
QQQARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLGGQTATW
EKLEKNISDRLADAQAQLAVAVEKERSASEELLTIRSQLTSLESQNSLLRQEKARVLAQL
EAEKSKREKLEDDNSREHAELTNLKGEHSRLLEEVKKEKLLLTNQLEMEKMKVEQEKKKC
YLAQEALREKERKAMTHSVGEPPASSTPSLSRSSSISGAENVLHTSVLSQDDSLDHSLGT
MTMSMSMSGTNLYEAARLSGGSSIIENLQSQLKLREGEIAQLQLEITSLERSRSVMAEEL
VRLTNQNDEMQEKVKDIPKLKVLLKDLEQRHNTILQMYGEKAEEAEELRLDLEDVKNMYK
TQIDELLKNQK
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtttaacgcgtctcacctgtcgagcttcgccaaacaagctttaacgacagcg
cagaaatcaatcgaccgagttctggacatcaaggaagaggatcaatggggtgacacggtt
gtaatgccctatgacgatacatcctcacctgggaaggtcactgtgagtggaggatggggt
atgacgcaatgggaagcgcctgctgaagagaaggccactactcctcctctcacctctgag
gctattaccacccctgtcacacgtactgttgtggatgaatctgaaaactttttcagtgcc
tttctatcaccaggagatgcaccagtgaccaattccaaagttgtgtcaatccccccagca
aagactcaaaggcaaactcaggagaaggaaaagaaaagcaaaaacgaaggagcagtgctg
cagatcaaaaatgaggacaatactccagaaccagaagggcctacggaggagagtattgag
agtcaggtagtggcggacagccaacagcctgaggagaccaaatccgctcttgcagcacct
tatgctgatgccatcctccttcagccggtttctcctgtttcttctccaactgaccaccct
ttcagtccagacagcacgatcgacgatgtaaaaacagatacagagtcagtttcagctgaa
tccaaaacgcaagcagaagatccacctgaaaaacaggtagagaccgattccacaaactcc
tctgaagcttctgaagataagaactctaccccagctgataacacaatccccgcatcctcc
aaggacgttccctctgctcaaaaggatcttaaagcagaggatcgtcaaaacgagacaccc
tctcctccagtcagtgctttctcctcggggacttcaactacaagtgacattgaagtgctt
gaccatgagagcgtgttgagtgaaagttctgccagctccagacaagaaaccagtgagagt
aaaactgggcttcacctgatgcaaggctccttccagctcctcacggcttcaacctgtgga
gattttgcccgactggaggactatcacaaactcacagagagctgcgggtcctcctcagat
gcgtttgagcgcattgattcgtttagcgtgcagtccctggacagcaggagcgtcagcgag
gttaactctgatgatgaagtccctggaagtcggactctagcttccgttactgctggcccg
actcctctgtcttcaacatgtgaaaagcaagaggatgaagtggaggagagcacagacgat
gtgaaggatgcccaggaagaaggactggttgaggcaggcaaggagcaggcagtagacgag
atggaggaaagtgggcgaagtgcaactcctgtgaacagcgagcagcctgacgaattgtat
ggcagcgttggtgacgatacggtgttcggctctacctgcagtgcagaagaaaaggggact
ccgccaatcacagaagagatgagaagtgtctcaacttcacagatattggagctgcaaaag
gttattgatgatctgtcaagccgtctggagaagagagaatctcagctgctggctgtgagc
aaagacaaggccaggctggatgaggagtgtgacaatttgaaagatgaagtgatgagcctg
aaggaagagagctccaatgtgcaatccctgaaagatgagttcactcagcgtattgcagat
gcagagaggaaggctcagttggcctgcaaggagagagatatagccaaaaaggagataaaa
ggtttgcgggaagaactttctacgagactaaactcttgtgatacaatggagctaatcagg
gagaaggaggagcagatcagaggtctgcttgaagaaggtgagaagctgtcaaaacaacag
ctgcagcagagtaatatcatcaagaaactgcgtgtaaaggaaaaggaaagcgacagtagg
attaccaagcagcagaagaagatcaaagagcaagaagaggagcttgggcatctgcagcag
gttctagatggaaaggaagaagtggagaaacaacacagagagaacatcaagaggctgaat
ggtgtggtggagcagcaagaaaaggagctaaacaggcttcagacggatgtagaggagctg
caggaaaaaaacaggagccttcaagctgccctggataattcttataaggagctggcggaa
ctacataaggctcacgctagcaaagcaagcgaggcccaggaggcagccctaagcagggaa
atccaggccaaagagcagctgagtttagctcttgagaaggctcaggaggaggccagagtc
cagcaggaggcgctggccaaccaggtggctgacctgagaatcgctctgcaaagggctgag
caacagcaggccaggaaagaagattatttaagggaggagatcagtgagcttcagcagagg
ctacaggaggcggagaccaggaaccaggagctcagtcagagtgttacctcggccacacgg
ccgcttctgcgacaaattgagaacttacaggcatcgctgggaggacaaactgcaacctgg
gaaaaactagagaagaacatttctgacaggctggctgatgcccaggcacagctggctgtt
gctgtggagaaggagcgatcggcgtctgaagaactgttaaccatcaggtctcagctgacc
tccctggaatcccagaattctttgctccggcaggaaaaagctagagttttggctcaacta
gaggctgagaaaagcaagagagagaaactggaggatgataacagcagggagcatgctgaa
ctgacaaacttaaaaggagagcacagtcgcttgctagaggaagtcaagaaagaaaagcta
ctgctaaccaaccagcttgagatggagaaaatgaaggtggagcaagagaagaagaaatgc
tatctagctcaagaagcactaagagaaaaggagcggaaagccatgacgcactctgttgga
gaacccccggcgtcatcgacaccatccttatcccgctccagctccattagtggggcagaa
aatgtactccacacttctgttctgtcccaggatgactctttggatcactcactgggaacc
atgaccatgtctatgtcaatgagtggaaccaacctgtatgaagcagccagattgtctgga
ggctccagcatcatagagaacctccagtcgcagcttaaactgagagaaggggaaatagct
cagttacagcttgagatcacttctttggagagaagtcgctcagtgatggcagaagagctg
gttcggcttacaaatcaaaacgatgagatgcaggagaaagtcaaggacatcccaaagttg
aaagttctgctaaaggatctggagcagagacacaacaccatcctgcagatgtatggagag
aaggcagaggaagcagaggaacttagactggatcttgaagatgtcaaaaacatgtacaaa
acccagattgatgaattactgaagaatcagaaataa
DBGET
integrated database retrieval system
