Cyprinodon variegatus (sheepshead minnow): 107091568
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Entry
107091568 CDS
T06110
Symbol
fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107091568 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107091568 (fip1l1)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107091568 (fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
107091568
NCBI-ProteinID:
XP_015241049
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MSENKLLPQTKTRSLRGDVAIGRRRVKSSPESCHGINEIHERKIKNQHHPDSSGQTLVYP
VCSSETGTDAVEDKDVFQNIYDAQQPYQNMRPLEEKPWRRPGADISNYFNYGFDEESWRA
YCAKQYKVQAFQRHITKVMRQQAEYEEAASRRSASGRPSQKSSRRKKAKCTRRRGRAGSR
SKAEACLFGSNAAKYTQEAGGITHKKNNVANFDLHHSLNVNTLLPFVPPQSSSFQLYQPV
SSSSMLGSGNTGNFDQPSTSSNADFVGRGRKPVERTEHVKRRRRIGGVTGKKKQRDEKER
AQRNIKD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaacaagttgcttccacaaaccaaaacacggtcccttcgtggtgacgtggca
attgggcgtcgcagagttaaatcgtcacctgagagttgccatgggataaatgaaattcat
gaaaggaagatcaaaaatcaacaccatcctgatagctctgggcaaacacttgtgtatccg
gtatgcagttctgaaacgggaacagatgcagttgaagacaaggatgtttttcagaatatt
tatgatgctcagcagccataccagaatatgaggcctctagaggagaagccatggaggaga
ccaggggctgatatctctaattactttaactatggttttgatgaagaaagctggagggca
tactgcgctaagcaatataaagtacaagcctttcaaagacatattactaaagtcatgagg
cagcaggctgaatatgaagaagcagcgtctcggcgatctgcatcaggaagaccatctcag
aaatccagcagaagaaagaaagctaaatgtacaaggagaagaggcagagctgggagcaga
agcaaagcggaagcgtgcctttttggcagcaatgctgccaaatatactcaggaggctggt
gggattacccacaagaagaacaatgttgccaatttcgatttgcatcattcactgaatgtc
aacactctgctcccctttgtgcctccacaatcttcctctttccagctgtatcaacctgtg
tcctcctctagcatgctgggcagcggtaacactggaaactttgatcagccctcaacttca
tcgaatgctgattttgtagggagaggaaggaagccagtggagcgcactgaacatgtgaag
agacgtcgcagaattgggggagtcactggtaaaaagaagcagagagatgaaaaggagaga
gcccaaagaaacatcaaggattaa
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