Cyprinodon variegatus (sheepshead minnow): 107091588
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Entry
107091588 CDS
T06110
Name
(RefSeq) afadin-like
KO
K05702
afadin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04520
Adherens junction
cvg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107091588
04530 Tight junction
107091588
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Ortholog
Paralog
GFIT
Motif
Pfam:
DIL
RA
PDZ
PDZ_6
PDZ_2
ASPP1-2_RA
Motif
Other DBs
NCBI-GeneID:
107091588
NCBI-ProteinID:
XP_015241079
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MPETSERQRLAEVIRQWNNNRLDLFEISQPDEHLVFYGVIRFYLEDNAEGRVATKCVRVC
SSSSAQEVIETLSEKFRPDMKMLSTSYSLYEIHGEKERKLDLDEKPLVLQLSWTSNNREG
QFVLKKDHGSLEVQCVSDDDLLISAEETFLCSVINDTSSSTVHFKLLPAYILYAASRFAL
QRHNGSGSPPSPNTHPVTSITNKMAAMIGKVIQRQQAIAGALSFWMANSSELLNFLKHDK
DLSQFTKQSQLDLSHQVQNAYSFLLHCLQRELIKHLPTFLIDPEQHGALPAGIEMVLDTL
MNAMSLLRRCRVNPALTIQLFSQLFHFISAWLFNQLIAPETMTPGLRSHYWGSALRQRLT
PIEAWAERQGLELAADCHLSHIIQATTLLTMRKYSVLDAKDIQSSCFNLNSLQLQMLMAG
YLCGTNEPQIPLDLMDAVVKAAEASADNLIHSEGQEIRLEERLNLLLPFLLPEGGYSCDT
VRGIPQGLAEFLEPICQKGLCCLTFVPHSQGDWTAHFGERTNGDGDLYLEAHRQPEIVNI
TLHKPLNSGMGVSIVAAKGAGQSHLGIYIKSVVKGGPAEMDGSLAAGDQLLSVDGHSLVG
LSQDRAAAIMMQTGPVVTLKVEKFAASYHGLWELLKETSPENRTTNNHLGMGDGEQRKLN
NGGWTLHCVVDGSPSERLHGGSKRKKDQRMQKNRQLYRSNPNMTAGFSLEDGGEHGVPNG
RGNNSASVSSINLCTDTLCREYQTLPNPKSKEKSPFESNQPTAVTPLNEQSSSRRSFMRH
QQLNFHCSPIKRQAMSEENLCTDAGGPLLDQRQNTCAQRNHISKQSTSSCSSFPVRSSVS
THDILSDGSGSTKQLQGTRPSPAGVWRIPFTQQSTPTPSVQPMRIDIPITRARSTQSNPP
LTTFQQSSAGLQVKMNQVHKASEQQINSPNQAAHIYARPLSAPEKLLQPSALWQQQRSIL
CGDKVEKPQVSITPTKHVSFEEPQSKQKSSGLAKKKDPQALCDPWRREAQEMLEKRQRLK
AVELLQQEAQQLRAKDKRSAEENDRLRKLDLEWQFQKRLQEVQQRDEEEEEEDLDMMVIL
QQLGDRTPINKEKIKSVGNDNREQNQEKQAGNQLFNRQEEKRDQRKKGLNNFAPDENLEG
NMSRASAPEKLTFRERQRLFSLTTSA
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgccggagacgagcgagcgacagagactagcagaagtcatcagacagtggaataacaac
agactggatttgtttgaaatcagccaacctgatgagcacctggtattctacggtgtgatc
cgattctaccttgaggataacgcagagggaagagtggctacaaagtgtgtacgcgtttgc
agcagttcttcagctcaagaagtcattgaaactctttcagagaaattcaggcctgatatg
aaaatgctgtcaacaagttattcattatatgagatccacggagagaaagagcgtaagttg
gatctagacgagaaacctttggttttacaactgagctggacgtcaaacaaccgagaagga
caatttgtgctcaaaaaggatcatggcagtttggaggtgcagtgtgtgtctgatgatgac
cttctcatttcagctgaggagaccttcctgtgctccgtcataaacgacaccagcagctcc
actgtacatttcaagctgctgcctgcatacatcctgtatgctgcgagtcgctttgccctg
cagcgccacaacggcagtggctctccaccttccccaaacacacaccctgtaacgtctatc
acaaacaaaatggctgccatgattgggaaggtcattcagaggcagcaggccatcgctgga
gctctttccttctggatggccaattcatctgagctgctgaactttctgaagcatgacaaa
gacctcagtcagttcacaaagcaaagtcagctggatctgtcccatcaggtgcaaaatgcc
tacagcttcctgctacattgcctgcagagggagttgattaagcacttgccaacttttctc
attgatccggagcaacacggtgctctaccggctggtatagagatggtgttggacaccttg
atgaatgccatgtctcttctacgccggtgtcgggttaacccggccctaactatccagctc
ttctcccagctttttcatttcatcagtgcttggctttttaaccagctcattgcaccagaa
accatgactccaggactgcgctctcactactgggggtctgcactgcgtcagaggctaaca
cccattgaggcctgggcagagaggcagggcttagagctggctgccgactgccacctgagc
cacataatacaggcgaccactcttctgacaatgagaaagtactcagtgctggatgctaag
gacattcagagctcctgtttcaacttgaactccctgcagctgcagatgttgatggctggc
tacctctgtggaaccaatgagcctcagattccccttgatttgatggatgccgtggtgaag
gctgccgaggcctcggccgataacctgattcacagtgaaggacaagaaatccggttggag
gagaggctcaatctgctcctgcctttcctgttgccggagggaggatattcctgtgacaca
gtgagaggaatccctcaggggctcgcagagtttttggagccaatatgtcagaaaggcctc
tgctgtttgacctttgtgcctcattcccaaggagactggacagcacactttggtgaaaga
acaaatggggatggggatttatacttggaagcacacagacaacctgagattgtgaacatc
actttgcataagcctttgaatagtgggatgggagtcagtatagtagcagccaagggagca
ggccagagtcacctcgggatttatattaaatctgttgtcaagggaggaccggccgaaatg
gacgggagcttagcagctggagatcagctgctcagtgtggacggtcacagcctggttgga
ctcagccaagacagggcagcagcgattatgatgcaaactggacctgtagtgaccctaaag
gtggaaaagtttgcggcgagctaccatggcctctgggaactactgaaggaaacgtcccca
gaaaacagaacaaccaacaaccatttaggaatgggtgatggagaacagaggaagctgaac
aacggggggtggacgctgcactgcgttgtggatggcagcccctcagagaggctccatgga
ggcagcaaaagaaagaaagaccagaggatgcagaaaaaccgccagctgtaccgttccaac
cctaacatgaccgcaggctttagcctggaggatggaggggaacacggtgtccccaatggg
agaggaaacaactctgcatccgtttcaagcatcaacctttgcactgataccctttgcagg
gaatatcagaccctacccaaccccaagtcgaaggagaagtcgccctttgagtcaaaccaa
ccaacagctgtgactcctttgaatgagcagagctccagtaggaggagcttcatgagacat
cagcagctgaatttccattgttctcccattaagcgtcaggccatgtctgaggagaacctg
tgtacggatgctggaggccccctgctggaccaaaggcagaacacatgtgcgcagaggaac
cacatttcaaaacagtcaacaagctcctgctcatccttccctgttcgctcaagcgtttcc
acacatgacatcctctctgatggcagcggctctaccaaacagctgcaaggaacccgtccc
agtcctgccggcgtctggagaatcccttttacacagcagtccacaccgacgccatcagtc
caaccaatgcgcatcgacatccccatcaccagagccaggagcacgcagtcaaaccctccc
ctcactaccttccagcagagctctgctgggcttcaggtgaagatgaaccaggttcataaa
gccagcgaacagcaaataaattctccaaaccaagcagctcatatctacgctcgtccttta
tcagctcctgagaagcttcttcagccctcagctctttggcagcagcagagatccatccta
tgcggagataaagtagaaaaaccccaagtgagcatcactccaaccaaacacgtttctttc
gaagagcctcagtctaagcagaagagctcaggccttgcaaagaaaaaagatccccaagca
ctgtgtgatccctggaggagggaagcccaggagatgctggagaagcggcagagactaaaa
gccgtggagcttctgcagcaggaggcgcagcagcttcgagcaaaagataaaaggagcgca
gaagagaatgacagactgaggaagcttgacctggagtggcagtttcagaagaggctgcag
gaggttcaacagagagatgaagaggaggaggaggaagatctggacatgatggtgatcctg
cagcagctgggggacaggacgccaattaacaaggaaaagatcaaatctgtaggaaatgac
aacagagaacaaaaccaggagaagcaagcaggaaatcagcttttcaaccggcaagaagag
aaacgagatcaaagaaaaaagggtctgaacaacttcgctccagatgagaacctggaggga
aacatgagcagggcgtctgctcctgagaagctgacattcagagagcgtcagcgtcttttc
tcactgacaacaagtgcataa
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integrated database retrieval system
