Cyprinodon variegatus (sheepshead minnow): 107091630
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Entry
107091630 CDS
T06110
Symbol
rsf1
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107091630 (rsf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107091630 (rsf1)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
107091630 (rsf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
107091630
NCBI-ProteinID:
XP_015241155
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MAAPAVVRSSGPPLCPSFAEVCSFLERYGAALDLPEMTFPLMEKYLRDTTAVPTPLVELH
VKLLRKLGRSVTTDRWEKYLAKVCQELNSTWAWELEQKGYQEMSMECKSCILKYLCECQF
DDNLKFKMAVNEEDPEKMRMQPIGRDQQGLMYWLQLDQEQNIRLYTEEQDDLDGSTWKCI
VRTRNDLAEALELLKAQIESDQCQDPEQNQNQAGSQSTSPAEKDTANEDGEVKNAKLPIP
SVEQNDNKKADILMEKNPIKEVIKEEEIKKENPEIKTEGEMNRKLDAFDNRVSTITAVKS
EHRGTDGPKNAVSVLMSPSVSLIKMNKEDEAERAAVRCNQQAKIPLKKRDLKLAGCFQTN
HLNNTNSSSIIVCNPSVINSKDSQGREGKSLNSLAAQGDPGSSQQQPVVIASRQEMTNGR
ASHLPTKDSHNGVIGQVGVVGHVGVIRSPSELHRPSGAEHLEENGPKSELCSSKAANEGK
EVSRQSVLVRKAQPDQETAPAASTLPPRAISPFKSLKPHVLGGKGDSLGFSPLNTLETSG
GEDQSTKTEKTDKGKTTDHKSSELEEGDAEESRKDTQCAAREEPGINSGTSGKADSDSSG
IISTQKTDNLNKNDRKGQGVNGGLVSVVKLKKIGFVSEQKKGVPLEEASSELQKEGIRLK
IKIPPHRRNKLRRKEGKEEIKTREQEVQKEERMLRRSARICRSSALPNCRPSSKVAESQR
KKQQKKQTPPVRTTEEEEADEDEDEEEDEDPPSSKNQKQEPAGKFSKRKGKRRHGRPRWT
NVRPKRHKQSEEGEVGDRGKKRGEEEKGESASEEEFSKSEEFPAEDACFHCGLPNHPELI
LLCDLCDRGYHTACLRPPLMLIPDGEWFCPPCQHKMLCEKLEEQLQNLDSALKKKERAER
RRERLVYVGISVENIIPEGDGEEGEEEKSAKKKDPKKTKNLGRRSTRTRKHISYRFDDFD
DAIDEAIEEDIRDLCSGAETGKEQPSVLSGVVKENQRPVRTLTRAARNKKKRKLNDLESD
STAVESEEEFMLSNSSEEEEFVASGADDGEEDEEEAGSDGGSLDRGTRPKRGLRGAPKHK
PRRTQRRGRKRRRRRSSEEEEEESDIDIDSDRFSDMTDSDADNKRRGLRRGQRQQVNYRE
TSESSDNSRTSTKREQVKRRGRPPKERFSSDYSDVSGSSKYSEEEDDYDDEEEDGQRRVD
RRRRRGVEEELRSSRTKEKRKRFEDEEREAGRRRLKRRQLGKGGDNDDDGRRASARTDRD
EEDPERMGRGKRREMLSQQRRKRLALMLKKRRPSTDEEDEGQSESDSEDSQSSSGDDRPI
RKRLNRIDSDDEEEENLIDSDDEAERDEGQKTMTRKSSVGGQRADDRNEGGSQEKGTGRS
LSPSNRHQTSRDPPKPGTGSPAVGRDAAASGRSERHNGPKHPAPDEEEEEEGQSDSLNSV
QSSPRS
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggcggtggtgagaagctccggcccgccgctttgcccgagcttcgcggag
gtatgttcgtttctggaacgatacggagcagcgctggacctccccgagatgactttcccg
ctgatggagaagtatctgcgcgacacgacagcagttccaacgcctttggtggagcttcat
gtgaagctgctgagaaaactggggaggtctgtaaccactgaccgctgggaaaaatacctg
gctaaggtttgccaggagctgaacagcacatgggcctgggagttggaacagaagggttac
caggagatgtcaatggagtgcaagtcatgtatactgaagtatctgtgtgagtgtcagttt
gatgacaatctgaagttcaagatggcagtcaacgaggaggaccccgagaagatgcggatg
cagcctatcggccgggaccagcagggcttgatgtactggctccagctggaccaggaacag
aacatccggctttatacagaggagcaggatgatctggatggatccacatggaagtgcatc
gtccggacacgtaatgacttagcagaggccctggaactgcttaaggcacagattgaatct
gatcaatgtcaggatccggaacagaaccagaatcaggctggatcccaaagcaccagtcct
gcagagaaggatacagcaaatgaagacggtgaagtcaagaatgccaagctccccatacct
tcagtggaacaaaatgacaacaagaaggctgacattttaatggaaaagaatccaatcaaa
gaagtaataaaagaggaggagataaagaaggaaaaccctgaaatcaagacggagggggaa
atgaatcgtaaactggatgcttttgataaccgcgtgagcacgatcaccgccgttaagtcg
gaacaccgaggtactgatggacccaagaacgccgtgtctgtactcatgtcacccagcgtg
agtttaataaagatgaacaaggaagacgaggcagagagggccgctgtcaggtgcaaccag
caggccaagatacctctgaagaagagggatcttaagctcgctggctgcttccaaaccaac
caccttaacaacactaacagcagcagtatcatcgtctgcaatccctcagtgatcaacagt
aaagactctcagggaagagaggggaagtcgctgaactctttagcagcacaaggagatcca
ggatcttctcagcagcagccggttgtcattgcatcaaggcaggaaatgaccaatggtaga
gcttctcatctgccaaccaaagacagtcataatggggtcattggccaggtcggagttgtc
ggtcatgttggagtcatccgcagcccgtctgaacttcacagaccttctggtgctgagcac
ctggaggaaaacgggccaaagtcggaactctgtagctcgaaggctgcaaatgaaggtaag
gaagtgagcaggcagtcggtgctggttagaaaagctcagcctgatcaggagacagcacca
gccgcctcaactctccctcctcgtgcaatttcacccttcaaatccttgaaaccccacgtt
ttagggggaaaaggggattctcttggtttctcccctctgaacacactggaaaccagtggt
ggggaagaccagagcaccaaaacagaaaagactgacaagggcaagaccactgatcataaa
agcagtgaactggaggagggcgatgcagaggagagcagaaaagacacacaatgtgcagct
agagaggaacctggaataaactcaggaacatcagggaaagcagactctgactcaagtggc
atcatctcaactcaaaaaacagacaatctgaataaaaatgacagaaagggacaaggggtc
aatggggggctggtcagcgtggttaagctgaagaagattggatttgtatcagaacagaaa
aagggggttcctctggaggaagcctcctctgaactccagaaagaaggaatcaggctaaag
atcaagatcccaccccaccggagaaacaagttacggaggaaagaaggaaaggaggagata
aaaaccagggaacaggaggtgcagaaggaagagaggatgctacggagatctgcaaggatc
tgcagatcatctgctttgccaaactgcaggccaagctcgaaggtggcagagagccagaga
aaaaaacagcaaaaaaaacagacaccacctgtcagaacaacggaggaagaggaggcggac
gaggatgaagatgaggaggaggatgaagaccctccttcttcaaagaaccaaaaacaagaa
cctgctggaaaatttagcaagcgcaagggtaaacgaaggcatggccgaccccgatggacc
aacgttcgccctaagagacacaaacaaagtgaggagggggaggttggtgacagggggaag
aaacgaggagaggaggagaaaggagaaagtgcctcagaggaggaattctctaaatccgag
gagtttcccgctgaggatgcctgctttcactgcggcctgcctaatcaccctgaactgatc
ctgctttgtgacttgtgtgatagaggataccatactgcctgcctgcggccgccgctcatg
ctgatcccggatggggaatggttctgtccaccctgccaacataagatgctgtgtgagaaa
ctagaggagcagcttcagaacctggacagcgctctgaagaaaaaagaacgggcagagagg
aggagggaacggctggtgtatgtggggatcagtgtggagaacatcattcctgagggagat
ggggaggagggggaggaggagaaatctgccaagaaaaaagatcctaaaaagaccaaaaat
ctggggaggagatcaaccagaaccagaaaacacatcagctacaggtttgatgactttgat
gatgccatcgacgaggctatagaagaggacatcagggacctctgtagcggggcagaaacg
ggcaaagagcagccctccgttttatcaggggtcgtcaaggagaaccagcggcccgtcaga
accctgacccgggctgccagaaataagaagaaacgaaaactgaatgacctggagagcgac
agcacggcagtagagagcgaagaagaatttatgctcagtaacagctcggaggaagaagaa
tttgttgcttcaggtgccgatgatggtgaggaggatgaggaggaagcaggcagcgatggc
gggagcttggacagaggaacacgtcctaaacggggtttgagaggggcacctaaacacaaa
cccaggagaacccagagacggggcagaaagcggcggcggagacggtccagtgaagaggaa
gaggaggagagcgatatagatattgattctgatcggtttagcgacatgacggacagtgac
gcagacaacaagaggaggggcctgaggcggggccagcggcagcaggtcaactaccgggaa
acatcggagtcgtcggacaactcaaggacctccaccaaaagggagcaggtgaaacggcga
ggcagaccgcccaaggagcgtttctcaagcgactacagcgacgtgtcgggttcctcaaaa
tactctgaggaggaggatgattatgatgatgaggaggaagatggtcagaggagagtggac
aggaggagaaggagaggagtggaggaggagcttcggagcagcaggactaaagagaagcgg
aaaagatttgaggatgaagagcgggaagcaggaaggaggaggctaaagaggaggcaactg
gggaaggggggcgacaatgacgacgacggaaggagggcatctgccaggacggacagagat
gaagaggatccggagaggatgggcaggggcaagaggagagagatgctgtcgcagcagcgg
cgcaaacggctcgctctcatgctcaagaagcggaggccgtcgactgacgaggaggacgag
ggacagtcagagtccgactcggaagattcacagtcctcatcaggagatgatcgcccgatc
cgtaaaagactcaaccgcatcgactcggatgacgaggaagaggagaatctcatcgattcg
gatgacgaagcagagcgggatgaaggacaaaagacgatgactagaaagtcctcggtgggg
gggcagagagctgacgacagaaacgagggcggttctcaggaaaaggggacgggccgtagc
ctgtccccatcaaacagacatcagacctccagagaccctccaaagcctgggactggaagc
ccagctgtgggcagagacgctgcagcctcaggccgatcagaaaggcacaatggccccaag
catccagccccagatgaggaggaggaggaggaaggccagtcagactcattaaactctgtc
cagagcagcccgcggtcatga
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integrated database retrieval system
