KEGG   Cyprinodon variegatus (sheepshead minnow): 107091644
Entry
107091644         CDS       T06110                                 
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107091644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107091644
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107091644
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     107091644
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107091644
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 107091644
NCBI-ProteinID: XP_015241173
Ensembl: ENSCVAG00000008893
LinkDB
Position
Unknown
AA seq 780 aa
MATPNLLKNKGSLQFEDKWDLMRPIVLKLLRQEAVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQTRVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCQLEITLMG
KQGSNKKTNMEDSIVRKLMLDTWNESIFSNIKSRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNPEDKLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETEKLHLMFSLM
DKVPSGIDPMLKDLEEHIVNAGLADMVASAETITTDSEKYVEQLLTLFNRFSKLVKEAFQ
DDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGMKTQPESKCPELLANYCDMLLRKTP
LSKKLTSEEIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWL
REVGMPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSS
EKVFVSLPTELEDLIPEVEDFYKRNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQL
AVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKKQVLSYDPSVSSPKDF
TDGTLFYVNQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAII
QIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDESDINTFIYMA
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggcgacgcctaatttgttaaagaacaaggggtccctgcagtttgaggacaagtgggac
ctgatgcggcccatcgttctcaagctgctaagacaagaggccgtcaccaagcagcagtgg
ttcgacttattctctgatgtccatgctgtgtgtttatgggacgataaaggtcctgccaaa
atccaccaagccctcaaagaagacatcctcgactttatcaaacaagcacaaactcgtgtg
ctgagtcaccaagatgacacggctctgctgaaggcctacatcgtggagtggaggaagttc
ttcacgcagtgtgacatcctgcccaaacccttctgtcagctggagattacactgatgggg
aaacaaggcagcaacaagaaaacaaacatggaggacagcatcgtacgcaagctaatgctg
gacacatggaacgagtcgatattctccaacataaagagccgcctgcaggacagtgcaatg
aaactggtgcatgcagagaggctgggagaggcctttgactcccagcttgttataggtgta
cgtgaatcatatgtcaacctgtgctctaacccagaggacaagctgcagatctacagggat
aactttgagaaagcctacctggactccacagagaggttctacagaacacaggcgccgtcc
tacctgcagcagaacggtgtccaaaactacatgaaatatgctgatgcaaaactcagagag
gaggagaagagagcacttagatatctagagacacgtcgtgaatgtaattctgttcaagca
cttatggaatgttgcgttaacgctttggtgacctcgttcaaggagacaatcttagccgaa
tgtccaggaatgatcaaacgcaacgagaccgagaagctgcacctcatgttttcactaatg
gacaaagttcccagtgggatcgatcccatgctaaaagacctagaagagcacatcgtcaat
gctggactggcagacatggtggcctccgctgagactatcactacagattctgagaagtat
gtggagcagttgcttacattgtttaaccgcttcagtaaactggtgaaggaggctttccag
gacgaccctcgcttcctcactgcaagagataaggcttataaagccgtcgtgaacgacgca
acaatcttcaagctggagctgcctttgaaacagaaaggtgttggtatgaagactcagccg
gagtcaaagtgtcccgagctgctggcgaactactgcgacatgttgctgaggaaaaccccc
ctcagtaagaaacttacctctgaagaaattgagctcaaactcaaagaagtgctcttggtg
ttgaagtacgtccaaaacaaagacgtgttcatgcgttaccataaggctcacctgaccagg
cgactgattctggacatttcagccgacagcgagattgaagagaacatggtggagtggctg
agggaagtaggaatgcctgctgattatgtgaacaaactggccaggatgtttcaggacatc
aaggtctcggaggacctcaatcaggttttcaaggagatgcataaacacaacaagctggct
ctaccagcggacagcgtgaacattaagatcctgaatgcgggagcctggtcacggagcagc
gaaaaggtttttgtctctctgccaacggagctggaggacctcatcccagaggtggaggac
ttctacaagaggaatcacagcggcagaaaactccactggcatcacctcatgtccaacggc
attatcactttcaaaaatgaagttggccaatatgacctggaggtaacgacgttccagctg
gcggtgctgtttgcctggaatcagaggcccagagagaaaatcagctttgagaacctcaaa
ctggccacagagctacctgatgcagagctgcgccgaacactatggtctcttgttgctttt
cctaaactgaagaagcaagtcctgtcgtatgacccctcagttagctcgcccaaagacttc
acagatggcacgctcttctacgtcaaccaggagttctcgctcattaaaaactccaaagtt
cagaagaggggaaagatcaatttgattggtcgtcttcagctcacgacggagcgaatgaga
gaagaggagaatgaaggaatcgttcagctcagaatactcagaactcaggaggctataatc
caaatcatgaagatgaggaagcgcattagcaatgctcagctgcagacggagcttgtggaa
atcctgaaaaacatgtttttgcctcagaagaagatgataaaggagcagattgagtggctc
atcgaacacaaatatataaagagggacgaatcggacatcaacaccttcatctacatggcc
tag

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