Cyprinodon variegatus (sheepshead minnow): 107091817
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Entry
107091817 CDS
T06110
Symbol
nalcn
Name
(RefSeq) sodium leak channel non-selective protein
KO
K21863
sodium leak channel non-selective protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107091817 (nalcn)
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
107091817 (nalcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
107091817
NCBI-ProteinID:
XP_015241470
Ensembl:
ENSCVAG00000022199
LinkDB
All DBs
Position
Unknown
AA seq
1746 aa
AA seq
DB search
MCSAGAISALLFPLIHSLYSTASPSMLKRKQSSRVEAQPMTDFGPDETLADSADIFWINK
PWVHSLLRACAIISVISVCMNTPKTFEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGI
IKGDNSYVKDRWCVFDGFMVFFIWVSLVLQVFEIAKLVDQMSPWGMLRIPRALIMIRAFR
IYFRFELPRSRITNILKRSGEQIWSVSIFLLFFLLLYGILGVQMFGTFNHHCVTNDTERN
HVTWNSLAIPDTHCSPDGEGYQCPLGFKCVDLEEFGLTRQELGYSGFNELGSSIFTVYEA
ASQEGWVFLMYRAIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMW
GSRSSTTSTATTQMFHEDAAGGWQLVAVDVNKPHGRAPACLQQMMRSSLFHMFILSMVAV
DVIVAASNYYKGENHRRHYDEFYLAEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFESL
LVVGTTLHIYPDLYHSQFTYFQVLRVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASL
LIVMSAISLQMFCFVEELDRFTTFPRAFMSMFQILTQEGWIDVMDQTLVAVGQVWAPVVA
IYFILYHLFATLILLSLFVAVILDNLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEK
FPNRPQMVKISKLPSDFTVPRIRESFMKQFIDRQQQDTSCLFRRLPSASSSSCDHSKRSA
IEDNKYIDQKLRRSIFSIRARNLLEKETTINKILRACTRQRMLSGSFEGQPAKERSILSV
QHHIRQERRSLRHGSTSQRISRGKSLETLTQDHSSTVRYRNAQREDSEIKMIQEKKEQAE
MKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRVIVRARFNASKTDPITGAVKNTKYH
QLYDLLGLVTYLDWVMIVVTICSCISMMFESPFTRVMHVPTLQIGEYVFVIFMSIELNLK
IMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWLPTDVPPESGAQLLMMLRCLRPLRI
FKLVPQMRKVVREVLKGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPRILKRED
CYGIFRINVSVSRNLNLKLKAEEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKG
WVEVRDVIIHRVGPIHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWE
DLKSRLKIAQPLHLPPRPENGGFRAKMYDITQHPFFKRGIAVLVLAQSVLLSVKWDVDDD
QVTFPLATMSVVFTFIFVLEVTMKLIAMSPAGYWQSRRNRYDLLVTSLGVIWIVLHFSLL
NAYTYMMGTCVIVFRFFTICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVV
LFGTVKYGENINRHANFSTAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDTYRYWET
DCGNYAGALIYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWN
MVDDKREGVIPTSRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHSGGDVTFHDVLS
MLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQHQSCSIIH
SLRESQQQELSSFLNPPSIETTVPSEDHNANNPDNPSQPEMSGLQQLLSPTLSDRGGYRQ
DSTDLGRPQRKLGQWRLPAGRTSVKSIVCKMNPVNDEASSGSEVKKWWTRQLTVESDESG
DDLIDI
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtgctggagcaatttcagctttacttttccctttgatccactctctgtatagc
acagcaagtcccagcatgctgaagaggaaacagagctcccgggtggaagcccagcccatg
accgactttgggccagatgagaccctcgcagacagcgctgacatcttctggatcaacaaa
ccatgggtccattccttgcttcgagcctgtgctatcatcagtgtcatctctgtctgtatg
aacactccaaagacctttgagcattaccctccactacagtatgtgacatttaccctggac
acgctgctcatgttcctctacactgcggagatgatagccaagatgcatataagaggaatc
atcaagggggacaactcttatgttaaggatcgctggtgtgtgtttgatggattcatggtg
tttttcatctgggtctccctggtgcttcaggtatttgaaatagcaaaactagtagatcaa
atgtctccatggggaatgctgagaataccccgagcgctaataatgatccgtgcctttaga
atctacttccgctttgagctccctcgttcccgcatcaccaacattctaaaacgatcaggg
gaacagatctggagtgtctccatcttcttactgttttttctcctgctctatggaattctg
ggtgttcaaatgtttggaacatttaaccatcactgtgtcacaaatgataccgaaagaaac
catgtaacatggaacagcttggcaattcctgatactcactgctcccctgatggagagggc
taccagtgtcctctgggcttcaaatgtgtggatctcgaagagttcgggctcactcgacag
gagcttggttacagtggattcaatgaattaggttcaagcatcttcacggtgtatgaagct
gcatcacaggagggttgggtttttctcatgtacagagccatcgacagtttcccacgctgg
cgctcctacttctactttataactctcattttcttcttggcttggcttgttaagaatgtg
ttcattgctgtcatcattgagacatttgctgagatcagagtgcagtttcaacagatgtgg
gggtcgaggagcagcaccacttcaactgctacaacacagatgttccatgaagatgctgcc
ggaggatggcagcttgttgctgtggatgtcaacaaacctcatggtagagcgcctgcttgc
cttcagcaaatgatgaggtcctccttgttccatatgttcatcctaagtatggttgctgtg
gatgttattgttgctgccagcaactattataaaggcgagaatcaccgaagacactatgat
gagttttatttggcagaggttgcttttactgtgctgtttgaccttgaagctctactgaaa
atttggtgccttggcttcactggctacattagctcctccttacataaatttgaatctctc
ctggttgtgggcaccacgttgcacatctaccccgatctttatcactcccagttcacctac
tttcaggtgctacgcgttgtccgtctgataaagatttctcctgctctggaggactttgtc
tacaagatatttggtccaggtaaaaaacttggcagcctggtggtcttcacagccagtctt
ctcatcgttatgtcagccatcagtctgcaaatgttctgttttgtggaggagctggaccgc
tttacaacttttcccagggcgttcatgtccatgttccagattctaacccaggagggctgg
atagatgtcatggaccagactctggtggctgtaggtcaagtgtgggctccagttgtagcc
atttacttcatcctctaccatctgtttgctaccctgatcctgctgagtctttttgtggct
gttatcttggacaatctcgagttggatgaagatttgaagaagctcaaacagctgaagcaa
agcgaagccaatgcagacaccaaagagaagctccctttacgactcaggatctttgaaaag
ttccccaaccggcctcagatggtgaagatctcaaagctcccatctgatttcacagtgccc
agaatcagagagagtttcatgaagcagtttattgatcgtcagcagcaggataccagctgt
ttgttccgccgtctcccctcggcttcatcctcctcgtgtgaccactccaaacgctcggcc
atcgaagacaacaagtatattgaccaaaagcttcgcagatcaatttttagcattcgagcc
cgcaaccttctggagaaagagacgacgattaataaaatcctacgggcttgtaccaggcag
cggatgttaagcgggtcctttgaaggccagccagccaaagagcgctcaatactcagtgtg
cagcaccacatacgacaagaacgcagatctctacgacatggttccaccagtcagaggatc
agccgggggaagtcactggaaacgctcacccaggatcattccagtacagtgcgctaccgt
aatgcccagagggaggacagtgagatcaagatgattcaagaaaagaaagaacaggcagaa
atgaaaagaaaagttcaagaggaggagctgagggagaaccatccttactttgataagcct
ctctttattgtgggccgggagcatcgcttcaggaacttctgcagggtgattgttcgggct
cgcttcaatgcatcaaaaactgacccaataacaggagcagtgaagaacaccaaataccac
cagctctatgatcttctgggcttagtcacctatctggactgggtgatgattgtggtgacc
atctgttcttgcatctccatgatgtttgaatcaccatttaccagggttatgcacgtccca
actctgcagattggggagtatgtgtttgtgatatttatgagcattgagcttaacctaaag
atcatggcggatgggctgttctttacccccacggccgtcatcagggacttcggaggggtg
atggacatcttcatctatcttgtgagtttgatctttctctgctggctccccaccgacgtc
cctcctgagtccggagctcagctgctgatgatgctgcgctgcctccgtccgctcaggatc
ttcaagctggttcctcagatgagaaaggttgtgcgggaggttcttaaaggattcaaggag
attttcctggtttctattctgctactcacgctgatgctggtgtttgcaagctttggagtt
cagctgtttgctggaaagctagccaaatgcaacgacccacgaatcctcaaacgggaggat
tgctatggtatcttccggataaatgtcagtgtttccagaaacctcaacctgaagctgaag
gccgaggagaagaaaccaggtttctgggtaccaagagtctgggccaacccacgaaatttt
aatttcgacaacgtaggcaatgctatgttggctctctttgaagtcttgtccctcaaaggc
tgggtagaggtccgagatgtcatcattcatcgtgttgggccgatacatggcatctacatc
catgtctttgtatttctgggttgcatgatcggcctgacgctattcgttggagttgtcata
gcaaacttcaatgagaataaaggtactgccctcctaacggtggaccagaggagatgggag
gatctgaagagccgattgaaaatagcccaaccactccatctgcccccccgtccagaaaat
ggaggttttcgagccaagatgtatgacatcactcagcaccccttcttcaaacgggggatt
gctgtcttggtgttggcacaatctgtcttgctgtcagttaagtgggatgttgatgatgat
caagtgacttttcctcttgccaccatgtctgtagtcttcaccttcatatttgttcttgag
gtgacaatgaagctgatagccatgtctccagctggatactggcagagcagaagaaatcgt
tatgatctgttggtcacttcactgggtgtcatttggatagttctgcatttttccttactg
aatgcgtacacatacatgatgggtacgtgtgtaatcgtcttcaggttcttcacaatatgt
gggaaacatgtgacactgaagatgctgctgctgactgtagtggtaagcatgtacaagagc
ttcttcatcatcgtgggcatgtttctcctcctcctgtgctacgctttcgctggagttgtt
ctctttggaacggtcaaatacggcgagaacatcaaccggcatgcaaacttctccacagca
ggcaaagccatcactgttctctttcgtattgtcacaggagaagattggaataaaatcatg
catgactgcatggttcagcccccattctgcacccctgatacatatcgctactgggaaact
gactgtggcaactacgctggagcattgatttacttctgttcattctacgttattatagca
tacattatgctcaacctacttgtagccattattgtggagaacttttctctcttctactcc
actgaagaagaccagctgctgagctataatgacctgaggcacttccaaatcatctggaac
atggtggatgacaaacgggagggagtgatcccaacatccagggtgaagtttctgcttcgt
cttctcagaggaagactggaggtggacctggacaaagacaaactgttatttaaacacatg
tgctatgaaatggagcgacttcacagtggaggagatgtaacctttcatgatgtgctgagc
atgctgtcatatcgctcggtggacattaggaagtctctccagctggaggagctgttggcc
cgggaacagctggagtatacaattgaagaggaggttgccaagcagaccatacgcatgtgg
ctaaagaaatgcctcaaacgcatcagggcgaagcagcatcagtcatgcagcatcatccac
agcctgagagagagccagcagcaggagctgagctccttcctcaaccctcccagcatagaa
accacagtgccaagtgaagaccacaatgctaacaacccagacaacccctcacagcctgag
atgagtggcctccagcagcttctgagccccacgttgtcagacagaggagggtacagacag
gactccacagacctggggagaccacagagaaagttgggacagtggcggctgcccgcaggc
cgtacgagtgtcaaatctattgtttgtaagatgaaccctgtcaacgatgaggcttcttca
gggtccgaggtgaagaaatggtggacccggcagctgactgtggagagcgacgagagcgga
gacgacctcatcgacatttag
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integrated database retrieval system
