Cyprinodon variegatus (sheepshead minnow): 107091855
Help
Entry
107091855 CDS
T06110
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107091855 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107091855 (copb2)
Membrane trafficking [BR:
cvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107091855 (copb2)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
107091855 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_HPS5
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
107091855
NCBI-ProteinID:
XP_015241515
Ensembl:
ENSCVAG00000020778
UniProt:
A0A3Q2EGM5
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDTSGKIIWAKHSEIQQANLKAMGEAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMAEKVAASQENNEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFSLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGNLDQCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLAKV
NQKAAESLADPTEYENLFPGLREAFAAEHYLRETCIGSSRPAKDYPLVTPNEDRNILEEA
QGYEPKGTFVPFSPQTKDSDETSSVPAAFETPSQPEPAAPEAAVKKEEVVEEKLTFSQSE
KEKTLDELEVDLDNMELDDIDTSDVNLDDDFLDD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacattaagcggaggctaacagccaggtcggaccgtgtaaagagt
gttgatcttcacccaaccgagccatggatgctggccagtctttacaacggcagcgtctgc
gtgtggaaccatgaaacgcagactctggtcaagacctttgaagtgtgtgacctgcctgtc
agagcgtccaaatttgtagccaggaagaactgggtcatcacaggagcagatgacatgcag
atccgtgtgtttaactataacaccttagaacgggttcatatgtttgaggcccactctgac
tatatccgttgcattgctgtccatccaacccagccgtacatccttaccagcagtgatgat
atgttgatcaagctgtgggactgggacaagaagtggtcgtgcagccaggtgtttgagggt
cacactcattatgtgatgcagattgtcatcaatcctaaggacaacaatcagtttgctagc
gcctctttggatagaacaattaaggtgtggcagctgggttcttcctctcccaatttcact
ttggagggtcatgagaagggagtgaactgcatcgactactacagcggtggagacaaaccc
tacttgatttcaggggcagatgatcgccaggtcaagatttgggactaccagaataagacc
tgcgttcagactctggagggacatgcccagaatgtctcctgtgtcagcttccacccagag
ctccccataattatcacaggttctgaggatggtacggtgcggatatggcactcaagcacc
taccgcctggaaagcaccctgaactacggcatggagcgagtgtggtgtgtatgtggtctt
agaggctctaacaatgtggcactgggatatgacgaaggaagcattatcatcaaagttgga
cgggaggagcctgcaatgtctatggacaccagtgggaagatcatctgggccaaacacagt
gaaatacagcaggccaacctgaaagccatgggtgaagcagaaatcaaagatggagagaga
ctgccgctggctgtgaaagacatgggcagctgtgagatttaccctcaaaccatacagcat
aacccaaatggacggtttgttgtcgtttgcggcgatggagagtatatcatctatactgca
atggctctgaggaacaagagcttcggctcagctcaggagtttgtctgggcccacgactcg
tctgaatatgccatcagagaaagcagcagtattgtcaaaatcttcaaaaacttcaaagaa
aagaaatctttcaagcccgactttggagcagaaggaatctatggggggttcctgcttggg
gtgaggtctgtaaacggtctggcattttatgactgggagaacacggagctaattcgtcgc
atcgagatccaacccaaacatatcttttggtcagactctggtgagttggtctgcatcgct
acagaggaatcattcttcattctccgttacatggcagaaaaagtagctgcctcccaggaa
aacaatgagggagtaacagaggatggcattgaggatgcctttgaggtcctgggagagatc
caggagatcgtaaagactggactttgggttggagactgcttcatctacaccagttctgtt
aacagactcaactactatgtgggaggcgagattgtcactattgcacacctggacagaacc
atgtaccttctgggttacattccaaaggatgaccgcctttaccttggtgacaaggagctc
aacattgtcagctattcactgttggtttctgtcctggagtatcagactgctgtgatgaga
agggactttgggatggcagacaaggtgctgcctaccatccccaaagagcaaaggaccagg
gttgcacatttcctggagaaacagggcttcaaacagcaggcgttggccgtatctacagac
ccagagcacaggttcgagttggccttgcaactgggggagctgaagattgcctatcagctg
gctgtggaagcggaatcggagcagaaatggaagcagttggcagagctggccatcagtaaa
tgccaattcagcttagcccaggagtgcctgcaccatgctcaggattatggcggcctgcta
ctgcttgcaacagcgtcaggtaacgccaccatggtgggcaagctggccgaaggggcggaa
agggatggcaagaacaacgtggccttcatgacatatttcctgcaggggaacttggatcaa
tgtttggaactcctaatcaagactaacagactaccagaggctgcgttcttggctcggaca
tacctccctagtcaagtgtcccgtgtggtcaaactatggagggaaagtttggctaaagtc
aaccagaaggcagccgaatcacttgccgaccccacagagtacgagaacctgtttcctggg
ctgagagaagcttttgcagctgagcattacctgagagagacgtgcatcggcagctcccga
cctgctaaagactatccactcgttacacccaatgaggaccgaaatattctggaggaggca
cagggatatgagcccaaaggcaccttcgttcccttttcaccccagacgaaagatagtgat
gaaaccagctcagtgccagcggcctttgagacgccttcacagcctgaacctgcagctcct
gaggcagcggtgaagaaggaggaggtggtggaggaaaaacttacattctctcagtcagag
aaggagaagactctggatgagttggaagttgacctggacaacatggagctggatgacatt
gacacctcagacgttaaccttgatgacgacttcctagatgattga
DBGET
integrated database retrieval system
