KEGG   Cyprinodon variegatus (sheepshead minnow): 107091875
Entry
107091875         CDS       T06110                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107091875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107091875
   03041 Spliceosome [BR:cvg03041]
    107091875
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     107091875
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107091875
Spliceosome [BR:cvg03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    107091875
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 107091875
NCBI-ProteinID: XP_015241548
Ensembl: ENSCVAG00000012637
UniProt: A0A3Q2CX48
LinkDB
Position
Unknown
AA seq 338 aa
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDAAMAARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEECHL
RDYFQQFGKIEVIDIMTDRGTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TKQEMQSVGMGMRGGRSSGGRPYDYDRGFNQGSRGRYGDGPNNWNDGGYGGGPGGPGGYG
NGGNRGYNQGYNQGGGGGGGGGYGGNGYDSNGYGNCGGGGGGGGSGYNNMGHYDPQASNF
GPMKNNFGGGGGGGGGRSFGGYGGGSNNPGGYGRPGRF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgtcgaaagacgtccctcgtgaaccagagcagctccgcaagctgtttattggaggcctg
agcttcgagacgacagacgagagcctgcgtgctcattttgaacaatgggggtcccttaca
gactgcgtggtcatgagagatcccaacagcaagcggtccaggggttttggctttgttacc
tattcctcagtacaggaagttgatgcggcaatggctgcccgtcctcacaaagtggatggg
agggtcgtggagcctaaacgtgctgtgtccagagaagactcaaaccgtccaggtgctcac
gtaactgtgaagaaaatctttgtgggaggcatcaaagaggacactgaggagtgtcacctt
cgggattattttcaacagtttggcaaaatcgaggtcattgacattatgaccgaccgcggc
actggaaagaagaggggctttgctttcgtcacctttgatgaccacgattcagtggacagg
attgtcattcaaaaatatcacaccataaactctcacaactgcgaagtcaggaaggccctg
actaagcaggaaatgcaaagcgtaggaatgggaatgagaggaggacgcagcagcggggga
aggccatatgattacgacagaggcttcaaccagggtagcagaggtagatatggagatggt
cctaataattggaacgatggcggttatggaggtggccctggaggtcctggtggatacggc
aacggtggaaacaggggctataaccagggttacaaccagggtggtggaggcggcggcggt
ggaggctatggtggaaacggctacgacagcaacggttatggtaactgtggtggcggtggt
ggaggcggcggcagtggctacaacaacatgggccattacgacccccaggcctctaacttt
ggtccaatgaagaacaactttggaggtggtggcggcggcggtggaggcaggagcttcggt
ggctatggaggcggctccaacaatcctggtggctatggccgaccgggacgattctaa

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