Cyprinodon variegatus (sheepshead minnow): 107091884
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Entry
107091884 CDS
T06110
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107091884 (smarcal1)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107091884 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Flavi_DEAD
BrnA_antitoxin
Motif
Other DBs
NCBI-GeneID:
107091884
NCBI-ProteinID:
XP_015241566
Ensembl:
ENSCVAG00000018780
UniProt:
A0A3Q2EDK8
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MSKQLTAEQQRKIEENRRKALERRAQRQQPPAGVNGAPLQADLSNQRENYRNPNFSLPTR
VGPSSKIESQISSNQTHLPISCQINQNTLNNPPRQINGPASWTSQQLNSPGSTAGGSVGI
KPVQGISVTSGSTSASFYKSSSKPGVQVSTAQPPSSSTLSAPLPAKKAAISVRGKCVPHA
ENRFKVEVGYNAELIAVFKSIPSKTYDPATKTWSFSLDDYTQLMEEVAGIPSVSLRPLEG
IAALDSTSSRPYDGAALAALLKLCNGWQKPGAPTRGQCILVSRKKFEVDISYDPDVIAAF
KQIPTKNYDMTTRTWSFSLEDYKRLMDLLSGMAGVEVEPLPRAVIQAFAASFDGTKAKSL
DVPEADLSSIDPTLTSSLMPFQKEGVNFAVSKQGRLLLADDMGLGKTVQAICIAAYYRNE
WPLLVVTPSSVRFTWAEAFRRWLPSLSPASINVVVKAKENIRSGLVNIVSYDLLSRMDKQ
HPGQPFNVFIMDESHFLKNMKTARCKAALPLLKAAKRVILLSGTPAMSRPSELYTQILAV
RPTLFPRFHEFGVRYCDAQKQNWGWDYSGSSNLGELKLLLEECLMLRRLKSDVLSQLPSK
QRKVVTVTIDGVSTSTKAALSAAAKLLVKDHRSKKEEKEALLIFYNHTAEAKLQAIMEYI
TDMLECGREKFLVFAHHKLVLDHISAELLKKNVSFIRIDGGTPSAERQHLCEKFQYSSKS
CVAVLSITAANMGLTLHSADLVIFAELFWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGT
ADDHLWPMIQAKMNVLEQVGLSESNLSDNAVNASFHLKDPSQKSIMEMFQRSFSEEDDFD
EAILMEAANDWEDTPPETTPAPFPDITNVTDGPNKKTIKDFFNR
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcagctgactgcagagcagcagcggaagattgaggagaaccgacggaaggct
ttagagcgaagagcccaaagacagcagcctccagcgggggttaatggggctccactgcag
gcagatttatcaaatcagagagaaaattacagaaacccaaatttctctctaccaacaagg
gttggtccatcctctaaaatagaatctcagataagcagtaaccagacccatctacctatc
agctgtcaaattaaccaaaacactctgaataatccacccagacagatcaatggccccgct
tcttggacaagtcagcaattgaacagccctggatcaactgctggaggaagtgttggtatc
aagccagttcagggcatctctgtcacatctgggagcacatctgcctccttctacaagtca
tccagcaaacctggagtccaggtctctacagcacagcctccttcaagctccaccttatcg
gctcctttacctgccaaaaaggctgccatctctgtgagggggaaatgtgtgcctcatgca
gagaatcgtttcaaggtggaagtaggatacaatgcagagcttattgctgtttttaagtcc
atcccttcaaagacctatgaccctgccacaaaaacatggagcttcagtctggatgactat
acacagctaatggaggaggtagctggcattccctccgtgtctctcagacctctggaggga
atcgcagctttggactctacgtccagccgaccctatgatggtgcagcactggcagcgcta
ctaaagctctgtaatggctggcagaaacctggcgcaccgactcgagggcagtgcatcctg
gtgtctcggaagaagtttgaggtggacatctcttacgatcctgatgtgatcgcggctttt
aagcagattccaacaaaaaactatgacatgaccacacgaacgtggagcttttcactcgag
gattacaaaagactgatggacctgctcagtgggatggcaggagtggaggtggagcctctt
cccagggcagtaatacaggccttcgctgccagctttgatgggactaaagccaaatcttta
gacgtccctgaggcggacctctcaagcatcgaccccaccctaacctccagcctcatgccc
ttccagaaggagggagtcaactttgcggtgtctaagcaaggccgcctgctcctggctgac
gacatgggcttgggaaagactgtgcaggccatctgtatagcagcctactacaggaatgaa
tggcctttattagtggtgacaccttcatctgttcgcttcacctgggctgaggccttcaga
cgctggctcccctcactgagtcccgccagcatcaatgttgtggtgaaggccaaggaaaac
atacggtctggtttggtcaacatcgtcagctacgacctactgagcaggatggacaaacag
cacccaggacaacccttcaatgtcttcattatggatgagtctcactttctgaagaacatg
aagactgctcgttgcaaagcagccttacctctgctgaaggcagcgaagagggtgattctt
ctgtcagggacccctgcgatgtccagaccctctgagctctacacccagatcctggcagtc
agacctacactttttcctcgcttccatgagttcggggtgcgctactgtgatgctcaaaag
caaaactggggctgggactactccggctcctctaatctcggagagctcaagcttttgttg
gaggagtgtctgatgctgcgccgcctgaagtctgatgtcctctcccagcttccctccaag
cagcgaaaggttgtcaccgtgacgatagatggggtcagtaccagcaccaaagctgctctc
tcagctgcagccaagcttctggtcaaagatcatcgcagtaaaaaagaggagaaggaggcc
cttcttatcttttacaaccacacagctgaagccaagctgcaggccattatggagtatata
acagacatgctggagtgtggcagggagaagtttcttgtctttgcccatcataaattagtc
ctggatcacatctctgccgaactgctgaaaaagaacgtcagcttcatccgcatcgacgga
gggactccgtccgcagagcggcagcatctgtgtgaaaagttccagtattcctccaagtcc
tgtgtggctgtgttgtcaatcactgcagctaatatgggtctcaccctgcactctgcagac
ctggtgatctttgctgagctcttctggaacccaggggttctcattcaggctgaggacagg
gttcatcgtattggacagaccagcagtgtcaacattcactacctggttgccaaagggact
gctgatgatcatctgtggccaatgattcaagctaaaatgaacgtgttggaacaggtgggt
ctgtctgagtcaaacctttcagacaacgccgtgaatgcaagcttccacttaaaggacccg
agtcagaagagcatcatggaaatgttccagagatctttctctgaggaagacgactttgac
gaggccatcctaatggaggctgcaaacgactgggaagacacgcccccagaaacgacccct
gctcctttccccgatatcaccaatgttacagatggccccaacaaaaagactattaaagac
ttttttaacagatga
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