Cyprinodon variegatus (sheepshead minnow): 107091893
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Entry
107091893 CDS
T06110
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03420
Nucleotide excision repair
cvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
107091893 (ercc1)
03460 Fanconi anemia pathway
107091893 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107091893 (ercc1)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
107091893 (ercc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
107091893
NCBI-ProteinID:
XP_015241574
Ensembl:
ENSCVAG00000019532
UniProt:
A0A3Q2DC09
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MKRFHINLDDSAFTKERIPPKSQFQSKQNTSSPSTSTTEPIAKCSVQPLSYAEYIVQSKG
TAAAAPQRNVAPKQPMAGGAGVCSLQPKEPESVSSSTGGSEKTQDCDKRTEVQLEEGKKN
KDKLEPSERSCHKSDPSLIQGPKPVGSGSSIIVSPRQRGNPILKFVRSVPWEFGEVAPDY
ILGQTTCALFLSLRYHNLNPNYIHDRLKQLGNAFTLRVLLVQVDVKDPHHALKELARICI
MADCTLILAWSPEEAGRYLETYKSYEKKPADLLKEQVEKNYLSKVTDCLTTVKSVNKTDA
ITLLSTFSSVKGIIDASKEDLVLCPGLGPQKARRLYDVLHKPFLKSKTSNS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggtttcacatcaacctggacgattctgcgttcactaaagaaagaataccgcca
aagtctcagtttcagtcaaaacaaaacacaagctctccatcaacgtccaccacagagcca
attgctaaatgctctgtgcagcccctctcctatgcagagtacatcgtccagagtaaaggt
acagcagctgcagctccacagagaaatgttgcccccaaacagcccatggcaggaggagct
ggggtctgcagtctgcagccaaaggagccagaatctgtatcgtccagcactgggggctct
gaaaagacccaagactgtgataaaaggactgaagttcaactcgaggagggcaaaaagaat
aaggacaaactagagccatctgagaggagctgtcacaagtcagatccaagcctcatccag
ggtccaaaaccagtgggctctgggagcagcattattgtcagtcctcgacagaggggtaat
cccattctaaagtttgttaggagtgtcccctgggagtttggagaagttgcgcccgattac
atcctgggacagacaacttgtgctcttttccttagcctgaggtatcacaacctaaacccg
aactatatccatgaccgtttaaagcagcttggaaacgcattcaccttacgagtgttgctg
gttcaagtagatgtgaaagaccctcatcatgcactaaaggaattagctcgcatctgtatc
atggctgactgcactcttatcttggcttggagtccagaagaagcagggcgttaccttgaa
acatacaagtcatatgagaagaagccagcagaccttctgaaggagcaagtagaaaaaaac
tatctttcaaaggttacagattgcctgacaactgtgaaatctgtaaacaaaactgatgcc
ataaccttgctatccacattctcttcggtaaaaggaatcattgatgcctctaaagaagac
ttggttctctgtccaggcttgggaccacaaaaggcaagacgactttatgacgtcctccat
aagccttttctgaagtcaaagactagcaacagctga
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