Cyprinodon variegatus (sheepshead minnow): 107091905
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Entry
107091905 CDS
T06110
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107091905 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107091905 (xrcc5)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
107091905 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
107091905
NCBI-ProteinID:
XP_015241616
Ensembl:
ENSCVAG00000018914
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSSPGEEPPFAMAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNSLSQDGQYQNIKVHRHLMVPDFELLEEIEHQIHPENQQADWLDALVVCMDVLQNET
QGKKCDRLNIVLLTDLNTEASSDKLDVIINNLKQSGITLQFFLPFQVEDEEDGKGDEDGP
GSGHPGRGKGLSKEQRSGLEMVKHIMLSLDEEEGLDEIYTFRNAVEQLCMFKRIERRPMA
WPCQLTIGSSLSIRIVGYKAVTEEKLKKMWITVDAQTNQKDDVKRETVYCLDDDNETEVQ
KEDIIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTRKNLVLRHQFMGTQIVKIFP
ARDDEHAGVALSALIRGLDELNMVAIVRYAYDRRSNPQVGAAFPCIKPDYECLVYVQLPF
MEDLYGRQFTFPSLENNKKIAPSETQLAAVDSLIDSMMLVAEDENQEVRDLFKPHHLPNP
AFQRHFQCLHHRAVHPDSPLPPMESWLEAALDRPEVIKARCQAPLEEIKKLFPLTEVEKK
KKLKTSAQIFGKDSEEPDAKKAKEDEAEEEYNLADIAEGSVTSVGSVDPARDFRALIKQK
TIPFGEVCQQLTHRIEQLLSNKTMQYYMKSITCIQAFREQSVKQGNADLFNSYLQSLKRS
IPSRALEVFWDLLVQDAVTLISKDEVEGSTVSKNEANQFLLAEEKKEQAAPEPVEDAGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagcaaagtcagccctggtgctctgcatggatgtgggcttctccatgtccaac
tcatcccctggggaagaacctccctttgccatggctaagaaagtcatccagaagtttgtc
cagcgccaggtttttgcagagactaaggatgaactggctttggttctgtttggcaccgat
tctaccaaaaactctctgagccaggatgggcagtaccagaacatcaaggtgcatcggcat
cttatggtgccagactttgaattgctggaggagattgaacatcagatccaccctgagaat
caacaggctgactggctggatgctctggttgtctgcatggatgttcttcagaatgaaacc
caggggaagaagtgcgaccggctcaacattgtcctcctgactgatctgaacacagaagcc
agttcagacaaactggatgttattattaacaacctgaaacagtctggaatcaccctgcag
ttctttttgcctttccaagtggaggatgaggaagatggtaaaggagatgaagacggaccg
ggttctggacaccctgggaggggcaaaggtctctccaaggaacagcgcagcgggctggaa
atggttaaacacatcatgctgagtctggatgaggaggagggtctggatgaaatttacaca
ttcaggaatgctgttgagcagctgtgtatgtttaagcgcattgagaggagacccatggcc
tggccctgtcagctcaccatcggcagctctctgtctatccgcatagttggctacaaagca
gtgacagaagagaaactgaagaaaatgtggattacggtcgatgctcagaccaaccagaaa
gatgatgtcaagcgagagactgtttactgcctggatgacgacaatgagacagaggtgcag
aaagaagacattattcaaggtttccgttacggaagtgacatcgtccctttctccaaagtg
gaccaggatcagatgaagtataagcatgatgggaagtgctttgctgttcttggcttcacc
agaaagaacctggttcttcggcatcagttcatgggcacacagattgtcaagatatttcct
gcacgggatgatgagcatgcaggtgtggccttatcagctctgatccgtggtctggatgag
ctcaacatggttgccattgttcggtacgcttatgaccggcgcagcaatcctcaagtggga
gctgccttcccgtgtatcaagccagactatgagtgcctggtgtacgtccagctgcccttc
atggaggatctttatggaagacagtttacgtttccttctcttgagaacaacaagaagatc
gctccatcagagacgcagctggcagctgtagactctctcatcgactcgatgatgctcgta
gcagaagatgagaaccaggaagtgagggatctgtttaagccccaccatcttcccaaccct
gccttccagagacacttccagtgtctgcaccacagggctgtacaccctgactctcctctt
ccccccatggagtcatggctggaggcagctctggatcgccctgaggtcattaaggcacgc
tgccaagctccactggaggagataaagaagttgtttccactcacagaagtagagaagaaa
aagaagctgaaaacaagtgctcagatctttggcaaagactctgaggagccagatgccaag
aaggccaaagaagacgaagcagaggaggagtataacctggcagacatcgctgaaggatct
gttacttctgtgggaagcgtcgatccagctcgggacttccgtgctctgatcaaacagaaa
actattccgtttggagaggtctgtcagcagctgactcacaggatagagcagctgcttagc
aacaagaccatgcagtactacatgaaaagcatcacctgtatccaggcttttagagagcag
tctgttaagcaggggaatgctgatctgttcaacagttacctccaatccctgaaaaggagt
attcccagcagagccctcgaggtcttctgggacctgcttgttcaagatgctgtgactttg
atcagcaaggacgaggttgaaggaagcaccgtgtcaaaaaacgaggccaatcagtttctc
ctggctgaggaaaagaaagaacaagcagctcctgaaccggtggaagatgcaggagatgtt
gatgacttgcttgacatgatgtaa
DBGET
integrated database retrieval system
