Cyprinodon variegatus (sheepshead minnow): 107091920
Help
Entry
107091920 CDS
T06110
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107091920 (vps53)
Membrane trafficking [BR:
cvg04131
]
Protein recycling
Others
EARP complex
107091920 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
107091920 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
VPS51_Exo84_N
Syndetin_C
FBF1
Laminin_II
NBD94
COG5_N
Motif
Other DBs
NCBI-GeneID:
107091920
NCBI-ProteinID:
XP_015241638
Ensembl:
ENSCVAG00000018508
UniProt:
A0A3Q2DAP2
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MMEEEELELAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAS
IDDVVNKIRLKIRRLDDDIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYSDVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRTGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITKVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDIPGQQKRAESPLDQTNPFLEDEPGEDVGAEKDEDLAKPRKPKAPDNPFHGI
ISKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALSTIFQKFLREYAWKILSGNLPKSSSNSGGLTITSLLKEKEGYE
AAKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLMERINLTGEMDTFSTVISN
SIQLLVQDLDAACDPALSAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTR
KYFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRK
APASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKR
SEQSSMLELFRQRLPTPPSGADSGPSLSFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaagaattagaactagctgaggatttagaggcaattttgcatctaact
ccagaggtgcagctagctattgaacaggttttccccagccaggaccctcttgacagggca
gactttaatgctgtggagtatatcaacacactcttccccaccgagcagtctctggcgagt
atcgatgatgttgtaaataaaatcagactaaagatccggcgtcttgatgacgatatcaga
acagtagtgagaggccagaccaatgtggggcaggatggtagacaggctttggaggaagcc
cagatagccatccagcagctatttggcaaaatcaaagacattaaggacaaagctgagaag
tcggaacaaatggtcaaggagattacgagggacatcaagcagctggatcacgccaagcgc
cacctaactacctccataaccaccctcaaccacctgcatatgctagcagggggtgttgac
tctttagaagctatgaccagaaagaggcagtatagtgacgtggccaacttgctgcaggga
gtcgtcaacgtgcttgaacatttccagaaatacatgggcataccccaaatcagacagctt
tctgagagggtgaaggcagcacagagtgagctggggactcagattcttgcggattttgaa
gaagcatttccttcacaaggctccaagaggacaggtggacctagtaatgtgctgagagat
gcctgtctggtggcaaacgtcctcgaccctcgcatcaaacaggagatcatcaaaaagttc
atcaggcagcacctctcagagtacctggttctcttccaggaaaatcaagatgttgcctgg
ctggataagattgatcggcgctatgcttggatcaaacgacagctggtagactatgaggag
aaatatggtcgcatgtttcctgaagaatggtgcatgacggagcgaatcgctgtggagttc
tgccacatcaccaaggtggagctggccaaggtgatgcgaacacgggcaaaggaaattgag
gtgaaacttctcctgtttgctatccagaggacaacaaactttgagggtttactagctaaa
cgcttcacaggatgcaccctgactgacatacctgggcagcagaagagagcagagagccct
ctagaccaaaccaacccttttttagaggatgagccaggggaggatgtgggagcagaaaag
gatgaagatcttgctaagccgaggaagcccaaagctcctgacaatccattccacggcatt
atctccaagtgttttgaacctcatctatatgtctacatagaatcccaagacaagaacctt
ggggaactgattgaccgctttgtggctgatttccgagcacaaggcccccccaaggcaggc
accgaggaaggcggggcagtgctgcctagctgtgccgatctctttgtttactacaagaag
tgtatggtccagtgttcccaactgagcacaggcgaacccatgatcgccctttcaaccatt
ttccagaagttcctccgagaatatgcttggaagatcctttctggcaacctgccaaaatcc
agcagtaacagcggggggctcaccatcaccagcctgctgaaggaaaaggaaggttacgag
gcagcgaagttcactgtagatgagctatgcctgatctgcagcatccttagtacagcagaa
tactgtctggccaccacacaacagctggaagagaagcttaaggagaaagttgacaaggtg
ctgatggagaggataaatctgaccggggagatggacacattcagcactgtgatctccaac
agtatccagctgctggtccaagatctggatgcagcctgtgatcccgctctaagtgctatg
agcaagatgccatggcagagtgtggagcacgttggtgaccagagtccgtatgtcacgtca
atcattatgcacattaagcagaatgtgcccatcatcagagacaaccttgcctcaactcga
aaatacttcacacaattttgcatcaaatttacaaactctttcatccctaaatttattaac
cacctgtttagatgtaagcctatcagcatggtgggagctgaacagcttcttctagataca
cactccctgaagaccgttttgttggatcttccgtccataggctcccaggtgctccgaaag
gcgcctgccagttacactaagattgttgtgaaaggcatgacgcgagcagagatgatatta
aaggtggtgatggccccacatgaaccaccagtggtgtttgttgacaactacatcaaactt
ctggctgatgggaacccagagaccttccagaagattttggacatgaagggtctgaagcgc
agtgaacaaagcagcatgctggagctcttcaggcagaggttacccactccaccctctgga
gctgacagcggcccatctttgtccttcagtgcccccacccctgagcaagagtcatctcgc
atccgcaaactggagaagctcatcaaaaagagactgtga
DBGET
integrated database retrieval system
