Cyprinodon variegatus (sheepshead minnow): 107091957
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Entry
107091957 CDS
T06110
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107091957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107091957
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107091957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
107091957
NCBI-ProteinID:
XP_015241681
LinkDB
All DBs
Position
Unknown
AA seq
2358 aa
AA seq
DB search
MAALLLQELDSSELSKLPTTLQSKLEKLLLDRQYEIDSLKAHHEQFRVDSEQQFFEKVEQ
LQRCQAELLSQAQEHLKLKEDFTKLGEELKGVSEKNRENESVQEKLSSEQTLLSKVKEDL
EAEKRELVRTLEKRSLEVENLNDDLRQLNDKLVEVNTSKMALQRKVDELEASEVNIKYKE
KRMEQEKELLHGQMSWFKEELKAKTEELLSLSREKGNDILELKCLLENKDDELTKLHDQV
TSLKTSNEHLQKQNEDMINKLKDAKEQQAIMEEKFRNELNANIKLSNLYKGAAADSEAKS
EELSRAVEELHKLLKDAGEANKVLEEKLQEINGVSEKSVNELKERIQGLEKELDNANDLL
SSSKLRGPAGGDILAEDQLTTMSATAAAVSKIKPSMKLTELYTAYLESQEQLQLERLENK
RVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVTSLSAKLEQAVKEVDRLQNEADEANK
KSTVLERDNQRLELQVADLAKQVQVLLIELEEARGNHVLQEEEVSSADISSTSEVISQHL
VTFRSVEELQKQNQRLLVALRDLSAAQEIEEQESTGNNRVELEMSLARAQAELESLKEQR
SQQIKMAESIVRQRDMYRMLLAQATGGAFPQQGTSVEEFSLTSTPRRSPATTPTTGTPTA
LGAMMESAEALEAKAALRQLQEVFSAYKKERLESDKMMNEQNEKLQEQLSDLRSQNAKIS
TQLEFASKRYEMLQDNVEGYRKEIASLREKEQKMAASSQKLEQTVHTLREDLKAVNEELS
MTKGQVENLRKERDMLKLVESRLTQEKEATMSQQQSQNLLLNNLQAIQATLERSEADARQ
RLNSQIEKQEQQISQLQKRLEQEVEQRHLNNRNQEIQLLDVKRQLETQVALHQKTKDLLN
AAELELNTLKMQQGHPEARLTLSSPSTPIRGLQGSDQEREELKGRLQLAETRAEELAESL
RAATSSMEQYRAMAQSLEQSLETEKQVTEQARLSVEACFKEAEEQRRTLEEKLLEAEKQK
EALEEQKRKDLSSLEEQMNDVKRSLSSAQADHEAVLQELAVAKTQLQQTLQDSQEQAKLA
AEAQDKYEREMILHAADVEALQAAKAQALQAAELRHQLEERNQRVSSEMLEARVSWEVQE
KIIKEEMSKMESRYEELQRQNTLLHEQVQTMSTKMAANIQRAANESSLNVSLTEEGKSED
QLLEILRFVRREKEIAESRFEVAQGESLRHRLRVEHLEQELKEVQDSLSAARERMQVTAK
TLAQHDELMKKTETMNILMDTNKMLREEKEKMTQELQELQAKVQKLESDIFPLQQSNSEL
SEKNGMLQAEKTILEEEIKRWKARTQNLLIQQKDSDPDEYKRLHTEKETHLKRIQQLTEE
NTRLKAELNKMNNLTTTLQGQIQNMRDTMNKTNDERNNLKKELETKNQEIQEKARTITQV
KKIGRRYKTQYDDLKVQHEKLVNEAAAGPSQDEEARQASAQELQSVKDALNQAETRTKEL
EGQLENINKVVAERETELRNVQEQSSRLQTELNRLRQELQEKASQEEGLRKQMAEKDEKT
RKALLMARQKISRVTELHRENEELKQQREELEVRVSALKSQYEGRLSRQERELRDLRGQQ
ERQEQRDEPAEAGPSKIQEQQRTTEQRQISLKTTPAAERGSASASEPPTANIKPTPVVAT
ASKQPVNPGNKPTPRASIRPMITPAPVPTPTPTATVMPTTQVETQEAMQSTEAPPVEHVT
VYGSASGSVRSASPNVQTTLASSMLTVQQTPAQATAFVQPTQQQSVTHPEPDNREPSPVA
VEATPSSQVEWPSTSSSSSSSVFGTVSATPGSSAMSKRPREEEENSAAFTEVEPTQEDTS
RAPIPKKLRIIQRVGPEEEVMVEESAEAEGVVPSDSQDGAEMEFSHLEEAEEEAASQSVP
AEPGTTSSQSETPDQLQQEVIVILTDSESEGEEEEDEEEEEEGEEQDYAEEEEDEEEEDD
EEDDEEDEEEEEDGGMEEEGDESNEGSGDGNEAYEGDDTEGADVTDPGTETEESLGGSDS
TQRPADSQTPSFEGSQIEAFPTEQPITSSGTRMPPSPRRPVQQLPARLNIHPSQSSELGP
PAQVHRVPVRRQSVGRLPGTQSSAQHFFEDDDRTVPSAPTLVPPRSEGFDQAIHSPQVAG
VPRFRFGLSEEVPQTSSSSHSDLGQLASQGGLGMYESPLFLAPHEEESGGRSVPTTPLQA
AAADAVQSDTTEHASQSVPMVSTSTPGLVLPGTSGSVDEREAFLEPDTERPVAEASVEPV
VSQGEAEEPSQPSDRANLPSTSQEPSSSSADTSCAAPKPSRLGATRQLQRWQDSRGGRMK
RGGQAFPSRGVHGRRFLR
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactgctgttgcaggagctggattcctccgagctctctaaactgccgacaact
cttcaaagcaaacttgagaaacttttattggatcggcaatacgaaatcgactctttaaaa
gcacaccatgaacagttccgggttgacagcgagcaacagtttttcgaaaaagttgaacaa
cttcagcggtgccaggcggagctcttgtcgcaggctcaagaacatctaaaactcaaagag
gatttcactaaactgggtgaagaactaaaaggtgtgtctgagaagaacagggaaaatgag
tctgtccaggagaagttgtcatcagagcagaccttgctttcgaaagtcaaagaggatttg
gaggcagaaaagcgggaactcgtgagaaccctggaaaagagatctctggaagtagaaaat
ctaaatgatgacttgaggcagctgaatgataaattagtggaagtgaacacctccaagatg
gctctgcagaggaaggtggatgaacttgaagcttcagaggtgaatattaagtacaaggag
aagcgtatggaacaagagaaggagctcctgcatggccagatgtcttggtttaaagaggag
ctgaaggcaaagacggaggagctgctctctctttccagggaaaaggggaatgacatcttg
gagctgaaatgtttgctggagaataaagatgatgagttaaccaaacttcacgatcaggtg
accagtttgaaaacttcaaatgagcatcttcaaaagcaaaatgaagacatgatcaacaaa
ctgaaagacgcaaaagagcaacaggccatcatggaggagaagtttcgcaatgagttgaat
gccaacattaaactttccaatttatacaagggggcagcagcagattctgaagcaaaaagt
gaggagctgagtcgggccgtggaggagctgcacaaactgttgaaagatgcaggagaagcc
aacaaggttcttgaggaaaagctgcaggagattaacggtgtgtcggaaaaatcagtgaac
gagttaaaggaaaggatccaaggccttgagaaagagctggacaacgcaaacgatctgctg
tcttcttctaaactcagaggacctgctggtggagacattctggcagaggatcaattaaca
acaatgtctgcaacagctgctgctgtgtctaaaataaaacccagcatgaaactgactgag
ttgtacacggcatatctggagagccaggagcagctgcagttggagcgactggagaacaag
cgtgtcaacaagtatctggatgacattgtgcaggaggtcgaagcaaaagcccccatcctc
aaacggcagagggacgagcatgagcgcatgcagaagtcggtgaccagtctgtcggccaaa
ctggagcaggctgttaaggaagttgaccgtctgcagaacgaggctgatgaagctaataag
aaatccactgtcctggaaagagacaatcagagacttgaactccaggtggctgacctggcc
aaacaggtccaagtgctgctcattgagctggaagaggcccgtgggaaccacgtgcttcag
gaggaggaggtgagctcagctgacatcagcagcacatcagaggtgatcagccaacacttg
gtgacgttccgcagtgtggaggagctccagaagcagaaccagagacttcttgtggccctt
agggacctaagcgcggcccaagagatagaagagcaggaaagcactggcaataatcgtgtg
gagctggaaatgagtttggcgagggcccaggctgagttggagtccctgaaagagcagcgc
agccagcagattaagatggcagaatccatcgtgaggcagagggacatgtaccgcatgctg
ctggcccaggctacaggaggggccttccctcaacaaggaacatcagtggaggagttttct
ttgacttctacccctcggcgttcaccggcaaccactcccaccacaggaactcccactgca
ctcggggctatgatggagtctgctgaggcactggaggcaaaggcagctttgcgacagttg
caggaagtgttctcagcctataagaaggagcggctggagagcgataagatgatgaacgaa
cagaacgagaagctccaagagcagctctctgacctccgctctcaaaatgccaaaatatca
actcagctagagtttgcatcaaaaaggtatgagatgctgcaggataatgtggagggctac
aggaaagagattgcttcccttcgggagaaagaacagaagatggctgcttcctcacagaaa
ctagagcagactgtccacacgttgagagaggatctgaaggctgtgaacgaggaactctcc
atgactaagggtcaggttgagaacctgcgcaaggagagagacatgctgaagctggtggaa
tccaggctgacccaggagaaggaggcgaccatgagccagcagcagagtcagaacctgctg
ctgaataatcttcaggccatacaagccacgctggagcggtccgaagccgatgcacgtcag
cgtctgaacagccagattgaaaaacaagagcagcagatctcccagcttcagaagaggctt
gagcaggaagtggaacagcgccatctaaacaacaggaaccaagagatccagctgctagat
gtcaagaggcagttagaaactcaagtagcccttcatcagaaaacaaaggacctgctgaat
gctgctgagctggagctcaacactctgaagatgcagcaaggccatcctgaagcacgtctt
accctgagctctccgtccacacccatcagaggcctgcagggttcggatcaagaaagggag
gagctcaaaggccgcctgcagctggccgaaacccgagcggaggagctggcagagagcctc
agggctgccacctccagcatggagcagtacagagccatggcccagagcttagagcagtcc
ctggagacggagaaacaggtaacagagcaggcccgactgtcagttgaagcttgttttaag
gaggcagaggagcagcggcggacgctggaggagaagctcctggaagcagaaaagcaaaag
gaggctttagaggagcagaagagaaaagacctctcatctttggaggagcagatgaatgat
gtgaagagaagtctcagcagtgcccaggcagatcatgaggcagtgctccaggagctggct
gtagctaaaacccagttgcagcagactcttcaggacagccaggagcaggctaagctggca
gctgaagctcaagataaatatgagcgggagatgattctgcatgcagctgacgttgaggcg
ctgcaggcagccaaagctcaggctctgcaggctgcagagctcagacaccagctggaagag
agaaaccagcgggtcagctctgagatgctggaggccagagtctcctgggaggtgcaggag
aagatcattaaggaggaaatgtctaagatggaaagtcgttatgaggagttgcagaggcag
aacaccctcctgcatgagcaggtccagaccatgagcaccaagatggctgccaatattcag
cgagccgccaatgagagctcgctgaatgtttctttgactgaagaggggaaatctgaagac
cagctgcttgagattctcagatttgtgcgtcgggaaaaggagattgctgaatcccggttt
gaggtggcccaaggcgagagtttacgtcaccgtttgagggttgaacacttggagcaagag
cttaaggaggtgcaggacagtttgtctgctgcaagagagcgaatgcaggtgactgcaaag
actctggctcagcacgatgagctcatgaagaagactgaaacgatgaatatcttaatggat
accaacaagatgctgagagaagagaaagagaaaatgactcaagagctgcaggaactacaa
gctaaggtacagaagcttgagtcggacatctttcctctgcagcaaagtaactctgagctg
agtgagaaaaacggcatgctgcaggcggagaagacgatcctggaggaggaaatcaagcgc
tggaaggctcggactcagaatttactgattcagcagaaagattcagatcctgacgagtac
aaacggctgcatactgagaaagagactcacctgaaacgcatccagcagctcactgaggaa
aacactagactcaaagctgagctcaacaagatgaataacctgacaaccacgctgcaggga
caaatacagaacatgcgcgacactatgaacaagacgaacgatgaaaggaacaacctgaag
aaggaactagagactaagaaccaggagatccaagagaaggccagaaccatcacccaggtg
aagaaaatcggacgtcgctataagacacaatatgatgacctcaaggtgcagcatgagaag
cttgttaatgaggctgcagcaggtccatcccaagacgaggaggcacggcaagcttcggct
caggagctgcagagcgtcaaagatgccttgaatcaggctgaaaccagaaccaaggagctg
gagggacagctggagaacatcaacaaggtggtcgcagagcgggaaactgagttgcgtaac
gtccaagaacagtcctccagactgcagacggagctgaatcggctgagacaggagctgcag
gaaaaggcttctcaggaggaaggtctgagaaagcagatggccgagaaggacgagaaaacc
agaaaggccctcctgatggccagacagaagatcagccgtgtcacagagctacatagagag
aacgaggagctgaagcagcagcgtgaggagctggaggtccgagtgagcgctctcaagtct
cagtatgaaggccgacttagcagacaagagagggagctcagagatctgcggggtcagcag
gagaggcaggagcagagagacgagccagcagaggcgggtccaagcaagattcaagagcaa
caaaggacgacggaacaaaggcagatcagcctgaagacgactccagctgcagagaggggc
agtgcaagcgcctctgagcctccaactgccaacatcaagcccacccctgtggtggccaca
gccagcaaacagcctgtgaacccaggcaacaagcccactccgcgagctagcatcagacct
atgattacccctgcccctgtgcccactccaacacccaccgctacagtcatgccaaccaca
caggtggagacccaggaggccatgcagtctacagaagcgccaccagtggagcatgtgact
gtgtacggaagtgccagcggctccgtacgctccgccagccccaacgtccagaccactttg
gccagctccatgctgaccgttcagcagactccagcacaagccaccgcctttgttcagcca
acacagcagcagagcgtgacccacccagaacccgacaaccgggagccttcacctgtagca
gtcgaggccacgccgagttctcaggtggaatggccttcaacatcctcctcctcatcctcc
tctgtgtttggcacagtttcagcaacacctgggtcctccgccatgtccaagaggccaaga
gaggaagaggagaacagtgccgcgttcacggaggtggagcccacccaagaggacacatcc
agggctccaataccgaaaaagctgcgcatcatccagagagtggggccagaggaggaagtg
atggttgaagagagcgccgaggctgagggggtggtgccatcagacagccaagatggagca
gagatggagttttcacaccttgaggaagcggaggaagaagcagcctctcagtcggtccca
gcagagccagggaccacctcgagccaaagtgaaacacccgatcagctgcagcaggaggtc
atcgtcatactgactgactctgaaagtgaaggagaagaggaggaggacgaggaggaagag
gaagagggagaggagcaggattatgcagaggaggaggaagacgaggaagaggaggatgat
gaggaggacgatgaagaagatgaggaggaggaagaagatggagggatggaggaggaagga
gacgagagtaatgaaggaagcggggatggcaatgaggcttatgagggagacgatacagag
ggagctgatgtcacagacccgggcaccgagacagaagagagtttggggggttccgactcc
acccagaggcccgcagattcccagacaccgagctttgaggggagccaaattgaggctttt
ccaacagagcagccaatcacaagctctggtacacgtatgcctccgtcgccacggagacca
gtgcagcagcttccggcccgactcaacatccatccctctcagtcctcagaactgggaccg
cctgctcaggttcatcgtgttcctgtccgtcgccagtcagtgggccgactccctggcaca
cagagcagtgctcagcatttcttcgaagacgatgacaggacagttcccagcgctcctact
ctggtgcctcctcgctcagaagggtttgaccaggctatccattctccccaggtggctgga
gtcccccgcttcaggttcggtctgtcagaagaagtgcctcagaccagctcctcctcacac
tctgacctcgggcagctcgcctcacaaggaggtcttgggatgtatgagagtcctctgttc
ttggcccctcatgaggaagagtcaggtggccgcagcgttcccaccacaccgctgcaggct
gcagcagcagacgctgtgcagtctgacacaacggagcatgcctcgcagtcggttcccatg
gtgagcacatccacgccgggcctggtgctgccaggaacgtccggatctgtggacgaaaga
gaagcgttcctggagccagacactgaaaggcccgttgctgaagcgtctgtggaacccgtg
gtgtcccaaggagaagcggaggagccgagccagccgtctgacagagccaaccttccctcc
accagccaggaaccctcctccagctctgcagatacaagctgcgccgcacctaaaccctct
cgtcttggagccaccagacagctgcagcgctggcaagacagccgcggcggtcggatgaag
agaggaggtcaagccttcccttcccgcggcgttcatgggagacgatttctgagatga
DBGET
integrated database retrieval system
