Cyprinodon variegatus (sheepshead minnow): 107092116
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Entry
107092116 CDS
T06110
Symbol
gpc6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cvg00535
]
107092116 (gpc6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvg00537
]
107092116 (gpc6)
Proteoglycans [BR:
cvg00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
107092116 (gpc6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvg00537
]
Others
107092116 (gpc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
Serglycin
Fz
Motif
Other DBs
NCBI-GeneID:
107092116
NCBI-ProteinID:
XP_015241905
Ensembl:
ENSCVAG00000011479
UniProt:
A0A3Q2CUS3
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MLRLQSIICTFSVLSVAAKSDFLARNCSEVREACSEKGFIFTHVPHQEIPGEDLRVCTHE
HTCCTQEMEDKFGQRSKLDIENLLDERSHTLRSTFVSRHKRFDEFFLELLENTERSLNEM
FVRTYGKPYMQNAEVFENLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
EDYLECISKYTDELKPFGDVPRKLKAQVTRAFIAARTFVQGLSVGREVAQRVSKVNSTPA
CIRALTKMLYCPFCRGIPGVKPCKNYCLNVMKGCLANQADLDPEWNQYIDAMLLVAQRLE
GPFNIESVMEPIDVKISEAIMNMQDNSAQVSFRVFQGCGQPKLAEIQRSARGASDVLNAR
FRPYNPEEPPTTAAGTSLERLRMVWRTMQFSVVDIKEKLKLSKKFWSSLPEAICVDDRVT
AGNASEENCWNGHTKGRYFPEVQKDGLTNQLNNPEVGVDITRPDTFIRQQIMALRVMTNK
LRNAYNGNDIYFQDTSDEGSGSGSGSGCTEGCTTDMYSAATETPVVRADRSGPVEDSAVH
LAPPIALPTMLAVLALALHQQWR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctgagacttcagagcatcatttgcactttttctgtgctgtcagtcgcagcaaaatca
gattttttagcgcggaactgcagcgaggtgagggaggcttgttctgagaagggcttcatc
ttcacacatgttcctcaccaggagatcccaggagaagatctccgtgtttgcactcatgaa
cacacttgttgcacgcaagaaatggaggacaaatttggtcagcgaagtaagcttgacatc
gaaaatctgcttgatgagagaagtcatacgctgagaagcacatttgtctccagacataaa
agatttgatgaatttttcctggagcttctggagaacacagagcggtccctgaatgagatg
ttcgtgaggacttacggcaagccttacatgcagaacgctgaagtttttgagaacctgttt
gcagagctcaagcgatactacacaggaggaaacgttaatctggaggaaatgcttaatgat
ttttggtctcggctgctggagcgcatgttcacgctgctaaactcccagtatgtcatcact
gaagactatctggagtgtatcagcaagtacacagatgagctgaagccatttggagatgtg
cccaggaagctcaaggctcaggttactcgtgcattcatcgctgcacgcacattcgtccag
gggctttctgtaggccgggaagtggcccagagagtgtcgaaggtaaacagcacaccagct
tgtatacgagcactgacaaaaatgctgtactgccctttttgccgtggcataccaggagtg
aaaccctgcaagaattactgccttaatgtgatgaagggctgcctggcaaatcaagctgat
ctcgatccagagtggaaccagtacatcgatgccatgctgctggtggcacagaggctcgaa
gggcctttcaacattgaatccgtcatggaacctattgatgtcaagatttcagaggccatc
atgaatatgcaagataacagtgcccaggtttctttcagggttttccaaggctgtggccag
ccaaaacttgcagaaatccagaggtctgcccgtggtgcttcggatgtgctcaacgcccgc
tttagaccctacaacccagaggaaccgcccaccactgctgctggcacaagcttggaaagg
ctgaggatggtttggaggacgatgcagttcagtgttgtggacataaaagagaaactgaag
ttgtccaagaagttctggtcaagcctgcctgaggcaatatgtgtggatgacagagtgact
gcaggaaacgccagtgaggagaattgctggaatggacacaccaagggcaggtatttccct
gaagtccaaaaggatggccttactaaccagctaaataatcctgaggtgggtgtcgacatc
acacgtcctgacaccttcatccgtcaacagatcatggctctgagggtgatgaccaacaaa
ctaaggaatgcatacaatggcaatgacatctactttcaagacacaagcgatgaaggcagc
ggctcaggcagtggaagcggatgcacagagggctgcactacagacatgtacagtgctgct
accgaaaccccagtggtgagagctgaccgaagcgggcctgtggaggactctgctgtgcac
cttgcacctcccatagccctgccaaccatgctggctgtcttagcactagctctgcaccaa
caatggagataa
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