Cyprinodon variegatus (sheepshead minnow): 107092128
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Entry
107092128 CDS
T06110
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107092128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107092128
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107092128
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107092128
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
PRY
TRIM_CC
zf-C3HC4
zf-RING_2
zf-C3HC4_3
FN3_DSCAM-DSCAML_C
zf-C3HC4_2
zf-RING_5
Pur_ac_phosph_N
F36G3_coil
Inhibitor_Mig-6
NDNF
Motif
Other DBs
NCBI-GeneID:
107092128
NCBI-ProteinID:
XP_015241919
Ensembl:
ENSCVAG00000011186
UniProt:
A0A3Q2CU99
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSTRAPFSPLYLPPQGNSQLSENISLLFIFHQRAYIHYSHGETDSWSASLDFAGIPSLFC
VKMETLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSESIQSISAFQCPT
CRYVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRERVNPESKAMTLPTDR
VQCQFCEQDPPQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPLLDSHLRGLMCL
EHEDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYDKLKQALDSNLSSLIKRTSE
LESMMGKLIQTCQNVEVNASRQENKLQEECDLLINIIQQRRQIIATKIKEGKAIRLRKLA
QQIAGCKQCIERSSSLITQADQTLKESDHARFLQTAKSICERVSMATASSQILLPEINLN
DAFDTFALDFTREKKMLESLDYLTAPNPPAIREELCTASYDTITVHWTSDDEFSVISYEL
QYAIFTSQSNVVSLCNSVDSWMIVPNIKQNQYTVHGLQCGTNYIFIVKAINQAGSRSSAP
GKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSHSQDRFSSHSSYGVTGNVYI
DSGRHYWEALIGGSTWFAVGIAYKSAPRHEWVGKNSASWVLSRCNNSWVVRHNSKEIPIE
PSPHLRRLGILLDYDSGSLSFYDAVASQHLYTFDIDFVQPVCPVFNVWNRCLTVLSGLPI
PDHLESMDFNH
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaagagcacctttcagtcctctctatcttcctcctcagggaaatagccagctg
tctgaaaatatttctctacttttcatttttcaccaaagagcgtacatccattacagccat
ggggaaacagatagctggtcagcttccctggattttgctggcattccttctttgttttgc
gtgaaaatggaaacactagagtctgagctgacctgcccaatctgcctagagctttttgaa
gacccactgctgctgccctgtgctcacagtctttgtttcaattgtgcccatcgaatcctg
gtctcccattgcacccccagcgagtctatccagtctatcagcgccttccagtgtccaact
tgtcgctatgtcattactctcaaccagagaggcctagagggactgaaacgcaacgtgacc
ctgcagaacatcatagaccgctaccagaaagcctctctaagcgggcccaactcacctaac
gaaactcgtcgagagagggtaaacccagagagcaaagccatgacattacctactgaccgg
gtgcagtgtcagttctgtgagcaggaccccccgcaggatgccgtgaagacctgcgttacc
tgcgaggtatcatactgtgaggagtgcctcaaggccacccacccaaacaagaagcctttc
actgggcaccggctgatcgaacctctgctggactcccatctccgggggctcatgtgtttg
gagcatgaggatgagaaggtcaatatgtactgtgtgacagatgaacagttgatctgcgcc
ttgtgcaagcttgtcggtcgacatcgagaccatcaagtggcagctctcagtgaccggtat
gacaaactcaagcaagcattggactccaacctcagcagtctaatcaagaggaccagtgaa
ttagaaagcatgatgggaaaacttattcaaacctgccaaaatgtggaggtaaatgcttct
cggcaagaaaacaagctgcaggaagagtgtgacctactgattaatatcatacagcagcga
agacaaattatagctacaaagataaaagagggaaaggctataaggctgagaaagcttgct
caacagatagcaggttgcaagcagtgcatcgagagatcgtcctccctcatcactcaggct
gaccaaaccctcaaagagagcgaccacgcccgctttcttcagacggctaaaagtatctgt
gagagggtatctatggcaacagcatcttctcagatacttctaccagaaattaaccttaat
gatgcttttgatacttttgctctggacttcacaagagaaaagaaaatgcttgagagttta
gattacctcacagcaccaaacccaccagcaattcgtgaggaactttgtacagcttcttat
gacaccatcaccgttcattggacatcggatgatgagttttctgttatatcatatgaactg
cagtacgccatcttcaccagccagtctaatgttgtcagtctgtgtaactctgttgatagt
tggatgattgtcccaaacatcaagcaaaatcaatacactgtacatggactccagtgtggt
accaactacatttttatagtaaaggccataaaccaggctggaagccgcagcagcgctcca
gggaaactcaaaaccaacagtcagccatttaaattggacccaaagtctgctcaccggaag
ctaagagtgtcccacgacaaccttacagtggagagagatgagacatcatctaaaaagagc
cacagtcaggaccgcttctccagtcacagcagctatggagtcactgggaatgtctacata
gacagcgggcgccattactgggaagctcttattggaggcagcacatggtttgccgtagga
attgcttacaagtctgcaccaagacatgagtgggtggggaagaactctgcctcctgggta
ctctcccgctgcaacaactcctgggtggtgcgtcacaacagcaaggagatccccatcgag
ccttcaccacacctgaggcgccttgggatacttcttgattacgattcagggtctctctcc
ttctatgatgctgttgcttcacagcacttgtacacgtttgacattgactttgttcaacca
gtctgcccggtgttcaatgtttggaatagatgtttgacggttctcagtggactgcccatt
cctgatcatttagagagcatggactttaaccactaa
DBGET
integrated database retrieval system
