Cyprinodon variegatus (sheepshead minnow): 107092129
Help
Entry
107092129 CDS
T06110
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107092129
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Protocadherins
107092129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
107092129
NCBI-ProteinID:
XP_015241925
Ensembl:
ENSCVAG00000011405
UniProt:
A0A3Q2E1K3
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MRLSAPVFLLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDGGYGTIERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIQDINDNS
PGFPSDHVNIDISENAAAGTRFPLTIAHDLDTGENGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAVDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYI
LEIPENSPPGKILIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDPNTGVIKVQGEI
DFEENPIIEFDVQAKDLGPNPIPGHCKITVKVQDKNDNLPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRETKDEYNVTIVA
RDNGNPSLNNTRSFTVKILDENDNAPRFTKSLYILQVPENNIPGEYLGSVVAHDPDVGRN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKTFEFKVQAKDGGSPHMES
TSAVRVNILDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIIATVKAVDHDHGESGHLTY
EITEGNDDHLFEIDPMGGEVRTAHALWEEITPVVELVVRVTDHGKPPLSAVAKLIIKANT
EATAGGGSNSNGEEQHWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKDAGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSGSRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTPNSLTVPRSGCHSSFAGLSTDTQANRMSVIQTENFSSEPNYSGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKAAAVNGQPFEKE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
NSRKTLTTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSASSSPTKSTVPPDLALRE
PKEDRDVGSDSSAYGPPDGQCSPMHTELEEPSYLTCELRPKSLSSCLIHSSVISQECGGS
DCAPDQRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgcacccgttttccttttgctgtgggtgaaagccctcacgttaaaaaac
ctaaattattccgtcccagaggagcagggacctggaactgttatagggaatatagctaaa
gacggtggttatgggactatagagagagggaaaaaatctaattttagggtgctggagaat
tcagccccacatctggtggatgttgaccctgagagtggactaattttcaccaaacaaagg
attgacagggagacgctgtgtaggcgcaacccaaagtgccagctctccatggaggtgttc
gcgaatgacaaggagatttgcatgatcaagattgatatacaggacatcaacgacaactcc
cctggtttcccttcagatcatgtcaatattgatatttctgagaacgcagctgctgggacc
cgttttcccctcacaatcgcacatgacttggatactggggaaaatgggataaagacttat
caggtcacaagagatgattacaataccttctctctggatttaaaagtgaggggtgatggg
actatatacccagaactggtggttcaaagacccctggatagggaggatcagagtcatcac
acccttcttctcactgcagttgatggcggggagtatccgagatcaggctccatgcagatc
aacgtcagagtgactgattcgaatgacaatagccctgtttttgaaaaatcctcctatata
ttagagattccagagaattctccccctggaaaaatacttatagatctgaatgccactgac
caggatgagggaagcaacgggcaggtggtttattccttcactggatatgcatctgagcga
atacaagatttgttctcaatagacccaaacactggcgtcatcaaggtccagggagagatt
gactttgaagaaaatccaatcatagagtttgatgtgcaggcaaaggatcttgggcctaat
ccgattccaggacattgcaaaattactgtgaaagtgcaagacaaaaatgataacctgccc
ataataagttttgtttctgtcaggcagggagcaatcagtgaggcagctcctccagagtct
gtcattgcgctggtcagggtgactgataaagactcaggccgtaacggtcagctccagtgt
cgggttctaggaaatgttcctttcagactgcaggagaacaatgataatttctacactctg
ctcacggacagaccactggacagagaaacaaaagatgaatataatgttacaattgttgca
agagacaatgggaacccttctttgaacaacaccaggtccttcactgtgaaaatattagat
gagaacgacaatgcgccacgcttcacaaagtctttgtacatactgcaggtgccagagaac
aacatcccaggggaatacctgggctctgtagtggctcacgacccagatgtgggtcgtaat
ggaactgtgtcatactccatactgccgtcccatattggagacgtatctgtgtacacgtat
gtgtctgttaatcctacaaacggagcaatttatgcctcacgctccttcaactatgagcag
acaaaaacatttgagtttaaggttcaagcaaaagatggaggctctcctcacatggagagc
acttctgcagtcagggtcaacatccttgatgtaaatgacaatcttccagttataatttta
cccttgcttcagaatgatacggctgagatcccagtacctagaaatgtggggattgggtac
atcattgctacagttaaagcagtagaccatgaccatggagagagtgggcacttaacctat
gagattacagagggaaacgatgaccacctgtttgagatagacccaatgggcggagaggtt
agaactgcccatgctctatgggaggagattactccagtggttgagctggttgtgagggta
actgaccatggcaaacctcctttatctgctgtggctaagctgatcattaaagcgaataca
gaagccacagcaggagggggttctaactcgaatggggaagagcagcactgggatgtgtcc
cttcccctcatagttaccctctgcattatctctgtcatgctcctggccgtcatgactgcc
atcgctgtcaagtccaagcatcaagataaggatgctgggaattataactgccgcatggct
gagtactccaatcctccggtggggaaggggaaaaagaaaaggatcaacaagagtgacatc
atgttggtgcagagtgaaatggaggagagggattccgggagccgaatgaacgttgtcagc
agcccatccttgatcacctcgcccatatgttttgactaccagagcccactgccactcaca
ctgcccaggtcagaggtcatgtatctgaaaactactcccaacagcctgactgtgcccagg
tcgggttgccactccagctttgctggattaagcacagatactcaggcaaataggatgtca
gtgatacagactgaaaatttctcatcagagccaaattattctggcagcaggcagcctttt
gttcaaagctcaacatttaaggacgcagaaagagcaagtctcagagacagtggccatggt
gatagtgaccaagctgatagtgaccaggatactaataaaggctcacactgcgacacatct
gccagggaggccctcaagatgaaagcagcagcagttaatggccagccttttgagaaggag
caagacaaatcagtccactgcacggatgaatgtcgtgcactgggacactctgacagatgc
tggatgccaaagctacgggtaggaagccaagcagacagcgcagataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtagagacagagatttatggcaccatcagctgc
aacagcagaaaaaccctcaccacgttcggaaaagaacagcgggacagtacaatccttgtg
gccaatgttaaaccttacttaaaatcgcagcgtgcgctaagcccaccgctccaagagagt
ccatctgcttccagcagccccaccaagagcactgttcccccggacttggccctccgagag
cccaaagaagatagggatgtgggctcagacagcagtgcctatggccctccagatggccag
tgctccccaatgcacacagagctggaggagccctcctatctgacctgtgagctcaggcct
aagtccctgtcaagctgtctcattcacagctctgtcatcagtcaggagtgcggggggtcg
gattgtgctcccgaccagagggactctggcaactga
DBGET
integrated database retrieval system
