Cyprinodon variegatus (sheepshead minnow): 107092207
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Entry
107092207 CDS
T06110
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04136
Autophagy - other
cvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107092207 (atg13)
04136 Autophagy - other
107092207 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107092207 (atg13)
03029 Mitochondrial biogenesis [BR:
cvg03029
]
107092207 (atg13)
Membrane trafficking [BR:
cvg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107092207 (atg13)
Atg1 complex
107092207 (atg13)
Mitochondrial biogenesis [BR:
cvg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107092207 (atg13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
107092207
NCBI-ProteinID:
XP_015242024
Ensembl:
ENSCVAG00000008442
UniProt:
A0A3Q2GEX9
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLGGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSSRQFERSAPIMGIIVDHFVDAPGGNPRPINMGQPCNYRAPDDD
DGGALGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLQLPLAPGLVAHNLY
ASRLSYQPAPAGGATEFNTNQGLHAGKEVGMVLAPGADVHLTVENAPNTPSSSGDEEGLL
QSGEGRSVSPSDPVESLNAFTRKVGAFVNKPSNQITGGLDLPFAAFAPRGLDSEENDPMV
NPPDSPPSQSPLQASLHSQGSDCSGQQDDFVMVDFRPAFSKDDLLPMDLGTFYREFQNPP
QLASLSLHTSSQSMADDLDSLPEKLRVYEKNIDEFDAFVDMLQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctgagtccacaggataagaaagacttggacaagtttattaagtttttt
gccttaaagactgtccaggtgattgtccaagctcgcctcggggagaagatctgtacccgc
tcctcttcatcacccaccggctcagactggtttaatttggcgatcaaagacatcccagag
gtcactcatgaggccaagaaggcgctggccggtcagcttcctggcatcggccgatccatg
tgcgtggagatctccctgaagacctcagagggtgactctatggaattagaaacgtggtgc
ctggagatgaatgagaagtgcgataaggacattaaagtgtcttacaccgtctataaccgg
ctgtcggttcttctgaagtctctgctggcaatcaccagggtaactcctgcctataagctg
tccagaaagcagggccacgattacgtcatattatacaggatctactttggggaagtccag
ctgggcggactaggagaaggtttccagacggtgcgtgtcggtgttgttggtactcccgtc
ggcacggtcacactgtcttgcgcctaccgcaccaacctggcgttcatgtccagcaggcag
tttgaaaggtcggctcccattatgggaatcatcgtggatcacttcgtggatgctcccggc
ggcaatccgcgccccattaacatggggcagccatgcaactacagagccccagatgacgac
gacggaggagcgttgggagtccaggactcacaggaggtctgcaccacctccttctccacc
tcccctccctcccagtgtgtctgcacactgagtccatccccttccaaactgtccaagccc
ctcccgctggacagtcttcagctcccattggctccaggacttgtcgctcacaatctctat
gcctctaggttatcctaccaaccggcacctgcaggaggagctacagagttcaacaccaac
cagggtttacatgcggggaaagaagtcgggatggttctggctcctggagcagatgtgcat
ctgactgtagaaaacgcccccaacacacccagcagcagtggcgatgaggagggcttgctg
cagagcggcgaggggaggagcgtctctccgtcggacccagtggagtcactcaacgcgttc
acgaggaaggtcggggcttttgtaaacaaacccagcaatcagataactggtggtttggat
ctcccgtttgctgcatttgctccccgtggtctggattctgaggagaacgatccgatggtg
aatccgccggactctcctcccagccagtcccccctgcaggccagtctccactcccagggc
tcagactgctcaggacagcaggacgacttcgtcatggtcgactttcgtccagctttctct
aaagacgacctgttgccgatggatctgggcaccttctacagagagtttcagaacccccca
cagctggccagcctctctcttcacaccagctcccagtcgatggctgacgacctggactct
ctgccggagaaactgcgcgtctatgagaaaaacattgacgaatttgacgcttttgtggac
atgcttcagtag
DBGET
integrated database retrieval system
