Cyprinodon variegatus (sheepshead minnow): 107092296
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Entry
107092296 CDS
T06110
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107092296
04121 Ubiquitin system [BR:
cvg04121
]
107092296
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107092296
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107092296
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107092296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
HypA
zf-RING_16
C1_2
zf-C3H2C3
DUF7560
DZR
Zn_ribbon_6
DZR_2
Motif
Other DBs
NCBI-GeneID:
107092296
NCBI-ProteinID:
XP_015242164
Ensembl:
ENSCVAG00000004709
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MAEAPPRSSRFFCHRCSAEISPRLPDYTCPRCESGFIEELTEETSSSENGSASTSSANDQ
NRSSFENMDHHHLFTFPSGYGPFALGIFDENFDLRSRLSTEDNREVENRREREMASRQRY
SARQPRGRHVPRRQGSRHEGVPTLEGIIQQLVNGIIAPTAMPNLGMGPWGMLHSNPMDYA
WGANGLDAIITQLLNQFENTGPPPADRERIKSLPTISITQEHVSAGLECPVCKEDYSVDE
NVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPVLSGINFSPPSSSSSSS
PSSPSNENATNNS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagcccctccacggtccagccggtttttttgtcaccggtgttcagcagagatc
tctccccgtttaccggactacacatgcccacgctgtgagtctgggtttattgaagaactt
acggaggaaacaagcagctcagaaaatgggtctgcatccacatcctctgccaatgatcag
aaccgctccagctttgagaacatggatcatcatcatttgttcacatttccctcgggatac
ggcccatttgccctggggattttcgacgaaaactttgaccttcgatcgagattatccaca
gaggacaaccgtgaggtagagaacagacgagaaagggaaatggcttcgcgccagcgatac
agtgccaggcagccacggggtcgacatgttcctcgcagacaggggtcgcggcacgaagga
gtgcccacattggagggaatcatccagcagctagttaatggaatcatagcacctacagcc
atgccaaatcttgggatgggaccttggggtatgctacattcaaatccgatggactatgcc
tggggagctaatggactggatgctatcattacacagttattgaaccagtttgaaaacact
ggtccgccgccagctgacagagaaagaataaagagtttaccaaccatttccattacacaa
gaacacgtcagtgctggtttagagtgtcctgtctgcaaagaagactacagtgttgatgag
aatgttaggcaactaccgtgcaatcatttgtttcacaatgattgtatagtaccatggctg
gagcagcacgacacgtgtcccgtgtgcaggaagagccttagtggacagaacacagccaca
gacccaccggtgttatcaggaatcaacttctctccaccttcatcctcctcctcttcctca
ccaagctcacctagcaacgaaaatgcaaccaacaactcctag
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