Cyprinodon variegatus (sheepshead minnow): 107092306
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Entry
107092306 CDS
T06110
Name
(RefSeq) homeobox protein orthopedia B-like isoform X1
KO
K24901
homeobox protein orthopedia
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107092306
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
107092306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
TFIIA
Motif
Other DBs
NCBI-GeneID:
107092306
NCBI-ProteinID:
XP_015242178
Ensembl:
ENSCVAG00000012046
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MLSHADLLDARLGELSSLNPGPKLQWMKDAAELLGHREALKCRLGGGVPDQGHPGDIAPG
SDSVEGTTLLPGEDITTVGSNSAGMQLNGKQEQEKQQQQQQQQPQQSSGQPANQQKQKRH
RTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTN
VFRAPGTLLPTPGLPQFSAAAAMENSLCSFHANDSRWATGMPGVSQLQLPPALGRQPGMA
QSLSQCSLGPGPPPNSMGLSNGLSSNGSGLQSHLYQTPFPGMSASLSGPTNVSGSPQLCS
SPDSDMWRGTSIASLRRKALEHTVSMSFT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcacgccgacctcctggatgctcggctcggtgagttatcatcactaaacccc
ggcccgaaactccagtggatgaaggatgctgcggagctcctcggacacagagaagctctg
aagtgccgactgggaggtggagttccggaccaggggcatccgggagacattgcccctggt
tcggactccgtagagggaacgactctcctgccaggagaagatatcaccaccgtagggtcc
aattctgccggcatgcagttgaatgggaaacaggagcaggagaagcagcaacagcagcag
caacagcagccgcagcagagctcgggacagcccgcgaaccaacagaaacagaagcgacac
aggacgcgtttcaccccggcgcaactcaacgaattggagcgcagcttcgccaagacccat
tacccagatatctttatgagggaggagctggcgttgaggatcggcctcaccgaatcgaga
gttcaggtttggttccagaacagacgagctaagtggaagaaaagaaagaagacaaccaac
gtgttccgcgccccggggacactgctcccaacgcctggcctaccgcagttctccgcggcg
gcagcaatggagaacagcctgtgctcgttccacgccaacgactcgcgctgggcaacgggg
atgcccggggtgtcccagctgcagctcccgccagccctgggccgtcagccgggtatggcg
cagtccctctcgcagtgcagcctgggtcctggccctccgcctaactccatgggcctctca
aacggtctgtcctccaacggatccggcctgcagtcccacctctaccagacgcctttcccg
ggaatgtccgcgtccctctccggccccacgaacgtatcgggctccccgcagctgtgtagc
tcaccggacagtgacatgtggagagggacaagcatcgcgtcacttcgacggaaagcactg
gagcacacagtctcaatgagtttcacttag
DBGET
integrated database retrieval system
