Cyprinodon variegatus (sheepshead minnow): 107092384
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Entry
107092384 CDS
T06110
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107092384
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
107092384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
107092384
NCBI-ProteinID:
XP_015242329
Ensembl:
ENSCVAG00000010477
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MGTTRLDGIIPRVAWLFILLGFSGTNAEEVCDSPLVSSLLPSSFRSSSHLSSSHSAGFAK
LNRRDGAGGWSPLTSDGYQWLEVDLGQRTKISAIATQGRYGSSDWLTSYQLMFSDTGHNW
KQYRQEDSIGSFPGNNNADSVVQYKLQQPVVARFLRLIPLDWNPSGRIGLRLETYGCPYT
SDVLNLDGSSSLVYRLSPGSRPTQTHVITLKFKTLRNSGTLLQVDGREGLTLSLEIERGK
LLLLFRQGKASSAKLQQLASLASLLDDQQWHYVAVELRGQNLNLTVDKHTLGVKIPLKFH
HLDIEELSVGTVEVMSSHKLFRSKKSFHGCLENLLFNGLNLIQLAKLQDHKVSLVGNVTF
SCAEPVSAAVTFPGPQSFLQLPWTASSSSGSASIGFQFRTWNNAGLLLTFDLPGQGGVVW
LFLNEARLYMQIQKEGRVLLELSAGSALSDGQWHSVELNSKQSRLTVSVDKDEGGSAQAS
LSFPLTVESHLFFGGCPSGDIHGCRNPVTAFQGCMRLFSLDNRIMDLIAVQQKHLGNYSN
LQIDMCGIIDRCSPSRCEHGGLCSQTWSVFHCNCSNSGYGGATCHSSVYQQSCEAYKHNG
NTSGYFYIDVDGSGPIKPQLVYCNMTDSETWMIIQHNNTELTTVSPAAGLDHHSVHFSYS
SEEEQLLGSIIQSEHCEQELSYQCRKSRLLNTPEGTPFSWWLGGRAPGRVQTYWGGAHPG
SQQCACGLHGDCVDPQHYCNCDADIMEWTEDSGLITHKEHLPIRSLVAGDIQRPGSEAAY
RVGPLRCFGDKNFWNTAFFEKETSYLHFPTFHGELSADISFLFKTTASSGVFLENLGIKD
FIRIELSSSTRVVFSFDVGNGPLEVQVESTVPLNDNRWHQVHAERNIKEASLRLDSLPVA
TQEAPAEGHVHLQLNSQLFIGGTASRQRGFRGCIRSLQLNGVTLDLEERAEITPGVRPGC
PGHCSSYGSLCQNQGRCVERAKGFNCDCSLSAYTGVFCHTELSASFKSGTSIRYTFKEPN
KMSRNGSALPSSIHSDTTLRGENISLSFRTAQSPALLLYVSSYYSEYMAVLINKHDKLEV
RYKLEGNRDAEVLRSSSGRNLADGQLHSITISRRTHTVSVQSDALDPHLSRLASLGFTGC
LSVVQFNSVSPLKAALLHPDTSPVHITGPLVQSNCGSAASANPYAAENIHHILDQSGSVG
SGQPLVNAIRTDSALIGGVIAVVIFVILTGLAIAARHLYQRKDTYRTQEENRVKQEDCPD
FPLNNPNDSQNLSMENPKEYFI
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atggggaccaccagattagatgggattattcctcgtgttgcctggctttttatcctcctt
ggcttttctgggacaaacgcagaagaggtgtgtgacagccctttggtgtccagcctgctg
ccttcatccttcagaagctcctcccatctttccagcagccactcagcgggattcgccaaa
ctcaaccggagagatggagctggaggctggtctcccctcacctcggacggctatcagtgg
ctggaggtggatctcggccaaaggaccaaaatttccgctatcgctacacagggccgctat
ggcagctctgattggctgacatcttaccagctgatgttcagcgacacggggcacaactgg
aagcagtacagacaagaggacagcatagggtcttttccagggaacaataatgcagacagt
gtggttcagtacaaactgcagcagcctgtcgtggctcgcttccttcgcctcattcctctg
gactggaatcccagcgggcggatcggactgcgccttgagacttatggctgtccttacacc
tctgatgtgttgaatttggatggcagcagcagtttggtgtacagactgagccccggatca
aggccaactcagacgcatgtcatcacattgaagtttaaaaccctcaggaactccggcacg
ctgctgcaggtggacggaagggaaggactcaccctgagtctggagatagagagaggaaag
ttgctgctgcttttcagacaaggcaaagcttcatctgcaaaacttcaacaacttgcatct
cttgcgagtcttttagatgatcagcaatggcactatgtggcagtggagcttcgtggccag
aacctcaacctcactgtggacaagcacacattgggggtcaaaatccctctaaagttccac
caccttgacatagaagagttaagtgtgggtacggttgaggttatgagctctcataaacta
tttcgctccaagaagagtttccatggctgcctggagaacttgctgttcaatggactcaac
ttgatacaacttgctaaacttcaggatcacaaagtttctcttgtgggcaatgtgaccttt
tcttgtgctgagccagtttctgctgctgtgacgtttcccgggccccagagcttcctccag
ttgccgtggacagcttcatcctcctcagggagtgcgtccattgggtttcagtttaggacg
tggaataacgctgggcttctgctcacttttgaccttcctgggcaaggaggcgtggtctgg
ttgtttttgaatgaagcgagactctacatgcagatccagaaagaagggagggtgctgctg
gagctcagtgcaggttctgcactcagtgacggccaatggcattcagtggagctgaactcc
aaacaaagccgtctgactgtctctgtggataaagatgaaggaggcagtgctcaagctagc
ctttcatttcctctcacagtagaaagtcacctcttctttggtggatgtccttctggagac
attcatggatgcagaaaccccgttacagcattccagggctgcatgcgtttattcagtctg
gacaacagaattatggacctgatcgcagtgcaacagaagcacctgggaaattacagcaac
ctgcagattgacatgtgtggaatcattgacaggtgttctcccagtcgctgtgaacatggc
ggcctctgcagtcagacatggtccgtcttccattgtaactgctccaacagcggctacggc
ggagccacctgccacagctctgtgtatcagcagtcctgtgaagcgtacaaacacaacgga
aacacatcaggatatttttacatcgatgtggatggcagtggacccatcaaaccacagcta
gtttactgcaacatgacagatagtgagacatggatgattatccagcacaacaacactgag
ctgaccacagtctcacctgcagctggcttggaccaccactcggtccacttcagttactct
tctgaagaagagcaacttttaggttcaatcatccaatcagagcactgtgaacaggagtta
tcctaccagtgcaggaaatcccgacttctcaacactccagaggggactccgttcagctgg
tggcttggtggccgcgctccaggccgtgtgcagacttattggggtggagctcatccaggc
agccagcagtgcgcctgtggcctccatggcgactgtgtggacccacagcactactgcaat
tgtgacgcagacatcatggagtggactgaggactcaggcctcattacccacaaggaacac
ctgcccatcagatcgctggtagctggagacattcagaggccgggttcagaggcagcatat
agagtgggaccactccgttgcttcggagacaaaaatttctggaatacagcattttttgag
aaggagacatcatacctccacttccccacctttcacggagagctaagtgcagacatctcc
ttccttttcaagactactgcgtcttctggagttttcctggaaaatcttggcatcaaagac
tttattcgaattgaactgagctcttctacccgggtggttttctccttcgacgttggtaat
ggcccgctggaagttcaagtagaatcgacagtcccattaaatgacaaccgctggcatcaa
gttcacgctgaacgcaacataaaggaggcctccctccgactggacagcctgcctgtggcc
acacaggaagctcctgctgaagggcacgtccacctgcagctcaacagccaactgttcatc
ggaggcacagcgtccagacagaggggtttccgaggctgtatccgctctctgcagctgaac
ggagtcactctggacctggaggaaagggcagagatcacgccgggggttcgacccggctgc
cccggtcactgtagcagctacggatccctgtgccagaatcagggacgctgtgtggagcgg
gccaagggcttcaactgtgactgcagcttgtctgcttacactggagtcttctgccataca
gagttatcagccagcttcaaatctggaacatcgatcagatacaccttcaaggagccgaac
aagatgtccagaaacggcagcgcactgccgtcctccatccactccgacacgacgctcaga
ggggagaacatctctttaagtttcaggacggcacaaagtccagctctgctactttacgtc
agctcctactacagcgagtacatggctgtgctcatcaacaagcatgataagctggaggtg
agatacaaactggaaggcaaccgagacgctgaagtgctgagaagcagcagcgggaggaat
ctggctgatggacagctgcacagcatcactatcagcagacggacacacacggtgtctgtg
cagtctgatgccttggatccccacctatctaggctggcctctctgggttttactggctgc
ctgtcagtagttcagtttaactcggtcagtcctctgaaggctgctctcctccacccggac
accagccctgtccacatcactggacctttggttcagtccaactgcggctctgcagcttca
gccaatccctacgcagctgaaaacattcaccatatattggaccagtctggttcagtgggc
tcaggtcaacctttagtcaatgccatcaggactgactcagctcttatcggaggtgtcata
gctgtcgtcatttttgttattcttaccggattggccatcgctgcccgacacctgtaccag
aggaaggacacgtatcgaacccaggaggagaacagggtcaaacaggaggactgtccagat
ttcccactgaacaacccgaatgactcccagaacctatccatggaaaatccaaaggaatac
tttatttaa
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