Cyprinodon variegatus (sheepshead minnow): 107092402
Help
Entry
107092402 CDS
T06110
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107092402
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107092402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A_deamin
dsrm
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
107092402
NCBI-ProteinID:
XP_015242354
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MAPVQGMCSRNMERSDGDVHRRSKRKRRRRRRSKGKGWSEVISAFSKPLTHCDNDVTSAE
VATRSSWTSLDVKENQNVKIIRYSEVLRKFHPTVICAPSPKQSQMVLQRDQQFSDGKHPL
CFKKLSCCQRSVWTVSPKNAMEQLNELHPGLQYDILSKSGPLHAPVFSVGVKVNGFEFEG
QGSTKKQAKIKAAELALQSLVQFPNASQTQSTMENFDFTADFFTEFEPSLTDNCKLLHCS
GATMQVLSNISKRRNTHSFTLDLISSTNPNRQSFPLKHQSPVALLNELLPGLRYMCQVER
IHGTPLKNFIMMVRLEGKVFEGCGHSKRQAKARAAAAALQSLYNVSLGPERKLLNSQGSR
TKHHLPQFFAESIYHMVREKYSQLTDGGPSSSHGRHKVLAGIVMTRGFDLRSAQVVSLAT
GTKCLDSMTAKDEGCTLRDCHAEVLSRRALVRFFFTQLELALCEREEGEDQSIFVADKDS
TYHFQLREGVRFHMYVSMSPCGDARLNSPYETKPAYPSRKFRCRLRVKVNGGEGTLPVVS
QSTHQKWDSVVLGQPVHMASVSCTDKIAKWSVVGLQGALLTRLVKPIYLHSLTVGTLSHT
GHLGRAITCRLAAVRHLFSFYRQQELLLGCLSSREVYTAGKASNVCMNWSYGEGVLEEVS
TTTGRRKVSGTPSQICRNSLFSYWLKLDNKCSGYANLFCSSTTEPACSHLNVLPGLFLA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggtgcaggggatgtgcagcaggaatatggagcgttcagatggtgatgtgcac
agaaggtccaaaaggaagaggaggcgaaggaggaggagtaaaggcaaaggatggagtgaa
gtaatatcagccttcagcaaacctttaacacactgtgataatgatgtaacatccgctgaa
gtcgccacaagatcaagttggaccagtttagacgtgaaagagaatcaaaatgtgaaaatc
attcggtacagtgaagttttgagaaaatttcatccaacagtaatttgtgctccttcaccc
aaacaaagccagatggtgctgcagagagaccagcagttttctgatggaaaacaccctttg
tgctttaaaaagctctcatgctgtcaaagatcagtctggacagtgtctccgaagaatgct
atggagcaactcaatgagttgcaccctggattgcagtatgacattttgtctaaaagtggt
cccctccatgcaccagtgttttctgttggtgtgaaggttaatggttttgagtttgagggt
caaggatctacaaaaaagcaggcaaagataaaggctgcagagctggctctacagtcgttg
gtccagtttccaaacgcctcccagactcaaagcacaatggagaactttgattttacagca
gatttctttacagagtttgaaccctctttgactgataactgcaaacttctgcactgcagc
ggagcaacaatgcaggtcctctctaacatcagcaagagacgaaacacacattccttcact
ctggacctaatttcctcaacaaatcccaacagacagtcttttcctttaaaacaccaaagt
ccggtggcgcttctcaatgagctgctaccgggactcagatacatgtgtcaggttgaaaga
atccatggcacaccacttaagaacttcatcatgatggttaggctggaagggaaggtattt
gagggttgtggtcacagtaaaagacaggccaaggcccgggcagcggctgcagctctacag
tctctttacaacgtaagtctgggacctgaaaggaaactactcaactcccagggaagtagg
accaaacatcatctacctcaattctttgctgagtcgatctatcacatggttagagaaaaa
tacagccagctcactgatggcggaccgtcttcttctcacggtcgtcacaaggtgctggcc
ggcatcgtaatgacccgaggctttgacctcagatcagcccaggttgtgtctctggccaca
ggaacaaagtgtttggactctatgacagcaaaggacgaaggttgtactcttagagactgc
catgctgaagttctcagcagacgggcgctggttcgattcttcttcactcagctggagctg
gcactttgtgagcgagaagagggggaggaccaatccatatttgtagcagataaagactcc
acctaccattttcagctgcgagagggggtccgcttccacatgtatgtaagcatgtcacca
tgtggggatgctcgactcaactccccctatgaaactaagcctgcatatcccagcaggaag
tttcgctgccgcctcagagtaaaggtgaatggtggcgaggggactctgcctgtcgtttct
cagagtacccatcaaaaatgggacagtgtggtgcttggtcaacctgtccacatggcaagc
gtgtcctgcacagataaaattgcaaagtggagtgtggttggcctccagggggcgctcctt
actcgtctggtaaagcccatttacctgcacagcctaacggtgggtaccctgagccacaca
ggtcatctgggcagagccataacctgtcggctggccgccgtcaggcacctgttctccttc
tacagacaacaggagctactcctcggctgtctcagcagcagagaggtttacacagctgga
aaagcaagcaatgtgtgtatgaactggagctatggtgaaggagttctggaggaggtcagc
accaccactggcaggaggaaggtgtcagggactccctcacagatctgcaggaattccttg
ttcagctactggctgaagctggataacaagtgttctggatatgctaacctgttctgctcc
tcaaccactgagcctgcctgttcccatctgaatgtactacctggcttgttcctggcttga
DBGET
integrated database retrieval system
