Cyprinodon variegatus (sheepshead minnow): 107092404
Help
Entry
107092404 CDS
T06110
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107092404 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107092404 (mlh3)
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107092404 (mlh3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
107092404
NCBI-ProteinID:
XP_015242360
Ensembl:
ENSCVAG00000022485
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MIRCLPAEVQGKLRSGVALPSLQQCVEELVLNSIDAGATCVGVRVDMDAFKVQVIDNGSG
MTAEDMERVGIRYHTSKCSRVEDLENLTCYGFRGEALASIISLAMLVEISSRTKMSVKTH
VKLFKDGQSMGVCEADTARPSAGTTVIICNFYHNMPVRRKRMDVVMEGERIRQRVEAVSL
MHPSVSFTLKNDLTGVMMVQLPKARDTYHRFVQIHSLARAEKLGDISHTHKQFEVSGYLG
KEGHYNNSLQYLYVNERLLLKTRIHKLLNCLLRRLSGSNQKHDNSDGTSLIRSPKHKRNQ
DLYGVYIINIKCSYSEYDICLEPAKTLVEFKDWDGVLLCVEEAVKAFLKRENLVSLFYQE
DLDCASPKVFGTERTDKKEEAISSTTIDCSVGIKLSSGFVHRRSGNDGNECRADEFPQCQ
QMDVDLNEFEKMPLCDPEPASTVLNEKNEPTVSESAENLDEQNRADCAVWSEQEIQQIGD
DSHPVSQIPTCQLESKFNSNTLQGPVRKISLSDPYVHQSLQIKDLSRSDRSSSQVQDLKL
KFERKFTASKRQMPLNLNSHGASQKPCKDQFTVIPSKIPKVNPVRKLSAFKLPDSLDKFR
QMYGKSVANLSQNLSLAKNPARLSCEEHKQDEVTDSQSRATPTADPKGGQISLAAKLCHL
KQHMEEDVEIPQQTCMNIPEDPGTLSICTDFTQDRINSQNNKAEPSLDGCEHQMDEDEDG
SACSDWLHHYDTSVGKTVYINKKTGLSRYEDPASKDTQVPCTSDVSNMAVSIFSEMGVEY
RCYPFQLDLVLPFLPNPRQGRVISSGNDCRDGADQSSNSLSSLYSKWKNPVFVRPPTIGV
DISTGQADELAVKIHNILFPYRFSKNMIHSMKVVNQVDKKFLACLIDTSDEGSAAQTETQ
GNLLVLVDQHAAHERIRLENLITDSYKDDQDGSGEKRLCSSTILPPLEINVTEEELRLLR
SSQPHLKSLGLEVTFSKTGPPKVFVGKVPLCFMEKESNELKRGRPSVIKPIVEEYLREQT
ELLRQTGRIGGTLPLTVLKVLSSLACHGAIKFNDTLSRDECRSLVASLSSCQLPFQCAHG
RPSIAPLVDLLHLDEDQKDFQKPNLKRLRRMYKAWELYGNK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgataaggtgcttgcccgcggaggttcaaggaaaacttcgctcaggtgttgccttaccg
tccctccagcaatgtgtggaggagctagttctaaatagcatcgatgcaggggccacctgt
gtgggcgtcagggtcgacatggatgcgttcaaggtccaggtgatcgacaatggatccggg
atgaccgctgaggacatggagcgtgtgggaatccgataccacaccagtaaatgcagccgt
gttgaagacctggagaacctcacatgttatggcttcagaggagaagccctggcgagcatc
atttctctagccatgctggttgaaatctcctcccggaccaaaatgtcagtgaaaactcat
gttaaactgtttaaggatggccagagcatgggcgtctgtgaggcagacactgctcgaccc
tctgcagggacaactgttatcatttgtaacttctatcacaacatgcctgtccgtaggaag
agaatggatgtagtcatggagggggagaggatcagacagagagtggaggctgtgtccctg
atgcatccctctgtgtccttcaccctgaagaatgacctcacaggggtcatgatggtgcag
cttccaaaagccagagacacctatcaccgctttgttcaaatacacagcctggcccgggca
gagaaactgggagacatcagccacacacacaagcagtttgaagtgagtggttacctgggc
aaagagggacactacaacaacagtttgcagtacctgtatgtgaacgagagacttctgcta
aaaacacggatccacaagctgctcaactgtctcctgcgccggctgagcggctccaatcag
aagcatgacaactcagacggcacctctttgattcggagtccaaagcataaacgaaatcag
gatctatatggggtgtacatcattaatataaagtgttcctattcggagtatgacatctgt
ctggagccagcaaaaactctggttgaatttaaagactgggatggtgtcttgctttgcgta
gaggaagcagttaaagcttttcttaagcgggagaacttggtgtccttgttttatcaagaa
gatctggactgtgcgtcccctaaagtttttggtacagaaagaacagacaaaaaagaggaa
gctattagttctaccacaattgactgcagtgttggaataaaattgtcatctggttttgtt
catcgtaggagtggtaatgacggcaatgagtgcagagctgatgaatttccacaatgtcag
caaatggatgtggatttgaatgaatttgagaagatgccactttgtgatccggagcctgca
tcaactgttctgaatgagaaaaacgagccaacagtctctgaaagtgctgaaaatttagac
gagcaaaacagagcagactgtgcagtttggagtgagcaagaaatccaacagattggtgac
gattcacaccctgtcagccaaattccaacatgtcagctagagtcaaagtttaatagtaac
acattgcagggtcctgtcagaaagattagcttgtctgacccgtatgttcaccaaagttta
cagataaaagacctgtcccgaagcgacaggtcttcatctcaggttcaagatttaaagcta
aagtttgagaggaaattcacagcttcaaaacgccaaatgccacttaatttaaactcgcat
ggcgcctctcagaaaccatgcaaagaccagtttacggtgatcccatcaaagattcccaaa
gttaatcctgttaggaagttatcagcattcaagctgccagattcgctcgataagtttaga
caaatgtacggtaaatctgtggcaaatctttctcaaaatttgagcttggctaaaaaccct
gctcgtttgtcttgtgaagaacataaacaagatgaagttacagactctcaaagccgagca
acacctacagctgatcccaaaggtggtcaaatatctttggcagctaaactctgtcatttg
aaacaacacatggaagaagatgtagaaatcccacagcaaacttgtatgaatattccagaa
gacccaggcactctcagcatttgtacagattttacccaggacaggatcaatagccagaac
aataaagctgaaccttcactcgacggctgtgaacatcagatggatgaggatgaggatggc
tcagcatgcagtgactggctccatcactatgatacatctgttggaaaaacagtttatatc
aacaaaaagactgggctcagcagatacgaggacccggcttcaaaagacacacaagtacca
tgtacatctgatgtctccaacatggctgttagcatcttctctgaaatgggtgtggaatac
agatgttacccatttcagctggatttagtgttgcctttcctgcctaatcccaggcaagga
agagtgattagctcaggaaatgactgtagagatggtgcagaccagagctccaactcactt
tcttcattatactctaaatggaaaaatccagtgtttgttcgcccacctacgattggggtg
gatatatccactggacaagctgatgaacttgctgtgaagatccacaacatcctgtttcca
taccgcttttctaagaatatgattcactccatgaaggttgtgaatcaagtggataaaaag
tttcttgcatgccttattgataccagtgatgagggttccgctgcacagactgaaactcaa
ggtaacctgctggtgttggtagatcagcacgcagcacacgagaggattcgacttgaaaat
ttaatcacagattcatacaaagacgaccaggatggctccggggagaaacgtctctgttca
tcaaccattttaccccctttggaaatcaatgtgacggaagaggagctcaggctgcttagg
tcttctcagccacatttaaagagtttgggcctggaagttaccttctcaaagacaggacct
ccaaaggtttttgtgggaaaggtgccgctgtgcttcatggaaaaagaaagtaatgagctt
aagcgaggaagaccgtctgtcatcaagcctattgttgaggagtatcttcgagagcagact
gagttactccgtcaaacaggcagaatcggaggcactttgccacttactgttttgaaagtc
ctctcctcgttggcatgccatggtgccatcaagtttaatgacactctaagcagagacgag
tgccgcagcctggtagcgtccttgtcttcatgccagctgcccttccagtgtgcccacggc
cgcccctctattgctcctctcgtagacctccttcatctggacgaggaccagaaggacttc
cagaaaccaaacctgaaaaggctaagaagaatgtataaagcatgggagctttatggaaat
aaataa
DBGET
integrated database retrieval system
