Cyprinodon variegatus (sheepshead minnow): 107092418
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Entry
107092418 CDS
T06110
Name
(RefSeq) cadherin-2-like isoform X1
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107092418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107092418
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107092418
04090 CD molecules [BR:
cvg04090
]
107092418
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
107092418
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Major cadherins
107092418
CD molecules [BR:
cvg04090
]
Proteins
107092418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
Stevor
Motif
Other DBs
NCBI-GeneID:
107092418
NCBI-ProteinID:
XP_015242385
Ensembl:
ENSCVAG00000022187
UniProt:
A0A3Q2DI73
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MFSLHEGSGLLLLLLAAGLQIAAEARGAPPCRPGFSEDLYTVVVPDITEEGWPLFNVKFV
SCGRGGLVRFECSNPSDYRIENDGVVYAARTLQRTQAPASPLLIKAVDTTTQQQWVTQVK
MMPPTQVQELAVPSGMAKRLKEIVFPSQNADGTLKRSKREWAIPPINVPENSRGPFPQEL
ARIHSDFDKNRPLRYTVTGSGADQPPTGIFTIDPISGVLFVNKGLDREHISSYHLRAHAV
DLNGNQVENPIDIVINVIDMNDNRPEFTHQIWNGSVPEGSKPGTFVMTVTSIDKDDPKTS
NGMLRYMIMSQNPESPSSNMFTINNNNGEIITVAAGLDREKVPQYTLIIKVTDMEGNPMY
GLSNTATAVISITGINGSPSEFAPEMVQELAVPSGMSKNLKEILFPSQNADSTLKRRKRD
WVIPPINVPENSRGPFPQELVRIRSDHDKNRSLRYSVTGPGADQPPTGIFTIDPISGELS
VNKPLDREHINSFHLRAHAVDLNGNQVENPIDIVINVIDMNDNRPEFTHQIWNGSVPEGS
KPGSFVMTVTSVDKDDPKTANGMLRYMIMSQNPESPSSNMFTINNKTGGIITVAAGLDRE
KVPQYTLIIKATDMEGNPMYGLSNTATAVISITDINDNPPEFVQDKFSGDVDENAVNVIV
ANLSVTDKDQPNTPAWNAVYKITGGDPTGRFSVPTDPTTNEGLVTVVKPIDYETNRLYLL
TVEAKNEVPLARGIHSPRQSTATVSIRVRDVNESPFFDPNPKLIKLEEGLMPESPLTTFT
AQDPDRFMQQTIRYSKLSDPANWLRIDPNTGRITTIAILDRESPEVKNSIYNATFLATDS
DKTHPASGTGTLQIFLSDINDNAPRVSPPEAEICEKPQPNSINITAYDGDLSHNAGPFAF
ELAHRPSEVKRNWTITRISGDYAQVSLRIGFLESGIYEVPIIITDSGNLPMSNTSYLRVK
VCQCDMNGDCTDQQHIMAAGLGTGAIISILLCIIILLILVLMFVVWMKRRDKERQAKQLL
IDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDTLEPDAIKPLAIRRLDERPLHPEPQ
YPIRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSG
GDQDYDYLNDWGPRFRKLADMYGGSDD
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgttacacgagggtagcgggctgcttctgctcctgctcgcagcaggactgcag
attgcagcagaggccaggggtgccccaccatgcaggccgggcttctctgaagatctctac
acggtggtggtgccagatatcacagaggaaggatggcctctcttcaacgtgaaatttgtc
agctgtggccgaggtggtctggtgcggtttgaatgcagcaatccatctgactatcggata
gaaaacgatggtgtagtttatgctgcaaggactcttcagcgcactcaagcccctgcatcg
cccttgctgatcaaggctgtggacacaaccactcagcagcaatgggtgacacaagtcaag
atgatgcctcccacacaggtccaggaactcgccgtcccttcaggcatggccaaaaggtta
aaggaaatagtgtttccatcacaaaatgcagacggcacgctgaaacgcagcaaacgagag
tgggccatccctccaatcaatgtgcctgagaactccagaggcccattcccacaggagctc
gcccggattcattcagattttgataaaaaccgacccctgagatatactgtgacgggttca
ggggctgaccagccccctactggaatcttcaccattgaccccatttctggagtattattc
gtcaacaagggtcttgatcgagagcacatttccagttatcatttgagagctcatgctgta
gacctgaatggcaaccaagtggaaaaccccatagatattgtgatcaacgttattgacatg
aatgacaaccgacctgagttcactcaccagatctggaatggaagtgttccagagggttcc
aaaccaggaacatttgtcatgactgtaacatctattgacaaagacgaccccaaaacgtca
aatggaatgcttcgatacatgatcatgtcccagaacccagagagcccatcctctaatatg
tttacgatcaacaacaacaacggagaaatcattacagtggctgcaggcctggacagagag
aaagtgcctcagtacactttgatcatcaaagtgactgacatggaaggaaaccctatgtac
ggcctatccaacacagccactgctgtcataagcatcactggcatcaatggcagtccatca
gagtttgcacctgagatggtccaggaactcgctgtcccttcaggcatgtccaaaaattta
aaggaaatactgtttccatcgcaaaatgcagacagcacactgaaacggagaaaaagagac
tgggtcatccctccaatcaatgtgcctgagaactccagaggcccattcccacaggagctt
gtccggattcgttcagatcatgataaaaaccgatccctgagatacagtgtgacgggtcca
ggtgctgaccagcccccgactggaatcttcaccatcgaccccatttctggagaattatct
gtcaacaagcctcttgatcgagagcacattaacagtttccatttgagagctcatgctgta
gacctgaatggcaaccaagtggaaaaccccatagatattgtgatcaacgttattgacatg
aatgacaaccgacctgagttcactcaccagatctggaatggaagtgttccagagggttcc
aaaccaggatcatttgtcatgactgtaacatctgttgacaaagacgaccccaaaacagcg
aatggaatgcttcgatacatgatcatgtcccagaacccagagagcccatcctctaatatg
tttacgatcaacaacaaaactggaggcatcattacagtggctgcaggcctggacagagag
aaagtgcctcaatacactttgataatcaaggcgactgacatggaaggaaaccctatgtat
ggcttgtccaacacagccacggctgtcatctcaatcacagacataaatgacaacccaccg
gagtttgtccaagacaagttttctggggatgtggatgagaatgccgtgaatgtaatagtg
gccaacctcagcgtgactgacaaggaccagcccaatactcctgcctggaatgcagtgtac
aaaatcaccgggggcgaccccaccggcaggttctctgtgcccaccgatccaactactaat
gagggtctggtaacagttgtcaagcccattgactatgaaaccaacaggttgtatttgttg
acagtggaagcaaaaaatgaagttcccctggccagagggattcactctcccagacagtcc
actgccactgtctccatcagagtaagggatgtcaacgagagtcctttctttgaccctaac
cctaaacttatcaagcttgaggaggggttgatgcccgagtcccctttgactactttcact
gcacaggatcccgacagattcatgcagcaaactatcagatattccaagctctcagatccg
gccaactggcttaggattgacccaaacacaggccggattacaacaattgccattttggac
cgcgagtcgcccgaagtgaagaacagcatatacaatgcaacattcctggcaactgacagc
gacaaaacccatccagcaagtggcacaggcactctacagatcttcctgtcggatatcaat
gacaatgcaccaagagtgtccccccctgaggcagagatatgcgaaaagccgcagccaaac
tccatcaacatcaccgcctacgatggggacctgagccacaatgcaggcccctttgcattc
gagttggcccaccggccttcagaggtcaagaggaactggaccataacaagaataagcggt
gactatgctcaggtgagcctaaggattggcttccttgagagtggaatctatgaggtcccc
atcataatcacagactcgggcaacttacccatgtccaatacctcctacctacgggttaaa
gtgtgccagtgtgacatgaatggagactgcactgaccagcagcacatcatggccgctggt
ctgggcacaggagccattatttcgatcctcctctgcatcatcatccttctcattctagtg
ctgatgtttgtggtgtggatgaagcggcgggacaaagagcgtcaggctaaacagcttctc
atcgaccccgaagatgatgtgagggacaatattctcaagtatgatgaggaaggaggcgga
gaagaggatcaggattatgacctgagtcagcttcagcagccagacacattagagcccgat
gccatcaagccacttgcaatccgccgtctagacgagagacccctccaccccgagccacag
tatccaataaggtcagcagcaccccatcctggagacatcggagacttcatcaatgagggc
ctgaaggcagccgacaacgaccccactgctcctccctacgactccctgcttgtgttcgat
tacgagggcagcggttccacggccggctccctaagctcgctcaattcctccagcagcggg
ggcgaccaggactacgattatctcaacgactggggccctcgtttcagaaaactggcggac
atgtacggcggaagcgatgactag
DBGET
integrated database retrieval system
