Cyprinodon variegatus (sheepshead minnow): 107092420
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Entry
107092420 CDS
T06110
Name
(RefSeq) desmoglein-2-like isoform X1
KO
K07597
desmoglein 2
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04382
Cornified envelope formation
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107092420
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107092420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107092420
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Major cadherins
107092420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
107092420
NCBI-ProteinID:
XP_015242390
Ensembl:
ENSCVAG00000022078
UniProt:
A0A3Q2EIL3
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MDLLRGKLFLLLTVITLVPVTVQEHGGVLRRQKRNWILAPRNLDEGQDYTTYDFVARIRS
DKETNKKIFYYLSGPGADQDPVGRFTVNRDTGYIKVHSILDREEIAQYNLTGLARYSDGT
LAEKDIALLIKVVDINDCPPVIKAQQIAQVNEHSKLGTVVMKVIATDDDDSNTENAKIFY
RIDERSNRDGMFTINSQTGEVMIAKTSLDRETQDTYKLTIIASDLNGKAGGNTGTGEIEI
KLTDINDNIPTLEKETYEGKIEENTVGVEVLRIQAVDLDLINTTNWFAMYEIVSGNEAGY
FQITTDKKTNEGVITVTKALDYEEIKTVNLGVKVKNEAEYNYGSSMIITGASTSKPYPIK
IDVINQKEAPKFQPNVKVVTISEEKNSISLSKVIATYTATDSDTLKTATNVRYAKLFDKD
NWISIDEKTAEIKLNKFPDRESKFLVNGTYYAKIICITNEVPSKTATGTIAIQVDDFNDH
CPTLTSTTQTMCFGDSVIYVTAEDKDMFPNSAPFEFIVKQEDSNENWFVEPYNATTVLLR
DKGSLWPGTYKVSLEIKDQQGKSCDEVQIVDLTVCACKENTKTCSLRSKGSSSSFGAGGI
LLMLLGLLLLLLIPLLLLACLCGSAARDFKAIPFDAKENLISYHTEGQGEDKEVSHLQVP
VSVDSDTINKKDIDFYARKGYFDHLVNSEAAFGGRGGGTMTAEDMHMYSKYNYNYSTGQN
LKDFMGTTSMAGQDMSMSQYRSTAFDGMALPGYYLQAYYFDKLNQSSQQQQEKDSEMIYN
YEGQESLAGSVGCCSLLENENDLAFLDDLGPKFKTLAEICQGTTLESSYVDIGVSNLSKQ
TVSTARPSTSTHTHVHTHTDTFRDRDHMNVSNLNVSNEASGSSVIIEEEKVTKSSQRSAT
LSNVQEKVVIPNQTLLIQQPPMYYAATPMYVVESKPQMVLVSGGTQQLVGQVGQAGLSQG
LIQVGGIQGSQGMMVVEGQVGMNGASGQVAQGLSQGITESSQVLFVENGSAGQKHSTHYM
QSSGQVPQRFSEVGFDVGGKEVHLKSFSAGSRGSAGSKEDFATTTTPRFQGGQRVVVQRK
KVSVTERNVESST
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcttagaggcaagcttttccttctactgacggtcatcactctggttcctgtg
acagtacaagaacatggtggagtgctgaggaggcagaaaagaaattggattcttgctccc
agaaaccttgatgagggacaggactacaccacctacgatttcgttgctagaattcgctca
gataaggagactaacaaaaagatattttactatttatctggtcctggtgctgaccaagat
cctgtaggcagatttactgttaaccgggacactggctacataaaggtccattctatcctg
gaccgagaggaaattgcacagtataatcttacgggtttggcaagatacagtgatgggact
cttgcagagaaggatattgctcttcttattaaggtcgtggacattaatgactgccctcca
gtcataaaagcacagcaaattgcacaagtgaacgagcacagcaaactaggtactgttgtc
atgaaagtcatagctacagatgatgatgactcgaacactgaaaacgccaagatcttctac
agaatagatgagcgcagtaacagagatgggatgttcactatcaactcgcaaacaggagag
gtcatgattgcaaagacctctctagatagagagactcaagacacatacaagttgaccatc
attgcttctgacttgaatggcaaggcaggagggaacacaggaactggtgaaattgagatt
aaactcacagacataaatgacaatattccaactctggaaaaagaaacgtatgagggaaaa
attgaggagaacacggttggggttgaagttctaaggatacaagcagtcgacctggatctg
atcaatacaaccaactggttcgcgatgtatgaaatcgtttcaggaaacgaagctggttat
tttcaaatcacaactgataaaaagaccaacgagggagtcataacagttactaaggctctg
gactatgaggaaataaagacggtaaatcttggagtgaaggttaaaaatgaagcagagtac
aactatggcagcagcatgataataactggagcttccacatcaaagccatatcccatcaaa
atagatgtcatcaatcagaaagaggcgccaaagttccagcccaatgtgaaagttgtaacc
atctctgaggaaaagaattccatctccctcagcaaggtcatagcaacatatactgctaca
gatagtgacactctgaagactgcaactaatgtgaggtatgcaaagctgtttgacaaagac
aactggataagtattgatgaaaaaacagccgaaatcaagttaaataaatttcctgatcga
gagtcgaagtttttggtcaatggaacatactacgccaaaattatttgcatcaccaatgag
gtcccttcaaaaactgccacaggaaccattgccattcaggtggatgactttaacgaccac
tgtccaacgctgacctccacgacccaaacaatgtgcttcggtgatagtgtcatttacgtc
acagcagaggacaaagatatgttccccaactcagcaccatttgagtttattgtaaagcaa
gaggacagcaatgagaattggttcgtggaaccttataatgcaaccaccgtcctccttcga
gacaaaggaagcctgtggccagggacctacaaagtatccctggagatcaaggaccagcag
gggaagtcctgcgatgaagtccaaattgttgacctaactgtgtgcgcatgtaaagaaaac
accaagacctgctcgttacgctccaaagggagttcaagcagttttggagctgggggtatc
ttgctcatgctgctcggactgttgctccttctgttgattccccttcttctgctcgcctgt
ctctgtggaagtgctgcaagagattttaaggctattccttttgatgcaaaagaaaatctc
atctcatatcacactgagggacaaggagaagacaaggaagtttctcatctccaagtccct
gtgtctgttgatagtgatacaataaataagaaggacatcgacttctatgccagaaaggga
tactttgatcatttggtcaactcagaggctgcatttggtggaagaggaggcggaactatg
acagcagaggacatgcacatgtacagcaaatacaactacaattattccacaggccagaat
ctgaaggattttatgggcacaacgtcaatggcaggacaagacatgagcatgtctcagtac
agatctacagcctttgatgggatggctttgccaggctattatctgcaggcatactatttc
gataaattaaatcaatcttcacagcaacaacaggagaaggattctgagatgatctacaac
tatgagggccaagaatcactggcaggttctgtaggttgctgcagccttcttgaaaatgag
aatgaccttgctttccttgatgacctcgggccaaaatttaaaactctggctgaaatctgc
cagggaacaacgctggagagcagttatgtggatattggagtttctaatctttcgaagcaa
acagtatctacagccaggccctccacttcaacccacacacatgtccatactcataccgat
acatttagagatagagaccacatgaatgtcagcaacctcaacgtgtctaatgaagcttct
ggatcctccgttatcatcgaagaggaaaaagttactaagagctcccagcgttctgcaact
ctttccaatgtccaggagaaagttgtcatccctaaccaaacactactcatacagcagcct
cccatgtactatgcagctacccccatgtatgtggttgagtccaaaccccaaatggtgctt
gtgtcaggaggaacacaacagctggttggtcaggtgggtcaagctgggctcagtcaaggg
ttaatacaagttggaggcatccaaggttctcagggtatgatggttgttgaagggcaggtg
ggaatgaacggggcatctggacaggtagcacaggggctctcgcagggaatcactgaatcc
agtcaagtgttgtttgttgagaatgggtctgcaggtcagaagcacagtacacattacatg
cagagttctggtcaagtaccgcagaggttttcagaagtgggctttgatgtgggaggtaaa
gaagttcatttgaagtcgttttcagcaggctcacggggctctgcaggctcaaaggaggac
ttcgcaacaacaaccacacccaggtttcaaggtgggcagagggttgttgtgcagcgtaaa
aaagtctcagtaactgagaggaatgtcgagtcaagcacataa
DBGET
integrated database retrieval system
