Cyprinodon variegatus (sheepshead minnow): 107092476
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Entry
107092476 CDS
T06110
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
cvg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107092476 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107092476 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107092476 (nup153)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107092476 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
107092476
NCBI-ProteinID:
XP_015242461
Ensembl:
ENSCVAG00000020646
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MAATGGGKIRSRRYHIASKPYAKSKQQSGLISRVTDTVKSIVPSWLQKYFKNEDGPAEKM
GQETEQNCQPPPPNGNEEGPPPIDGRDSPEPSTSNTEPSTSRASLNFQEYVLSRPPLSRS
HLHFTPMDASSQTMGASSSLFSQPSTSSAPGPFSTGFSLVKEIKDNLSQHEDDNISTTSG
FSSRASDKDVPTSKTASLPQLWSPEMDRTSSGPQQSQSSLKKPSFNLSVFGNSSNSTLNS
SLLNSSQLGDSPFYPGKTTYGGAAAVRSSRGRPGTPYQAPVRRQIKAKPAGAQPCGVTSA
TARRILQSLERMSSPLADAKRIPAAAGSPSHSTSMDGLTQDGSQSKKKRMDSNLPPVQKL
VVPTTPSVSGNRSVSFRPTLTPGGPLRTLDRAAREKTPTRQSPQLPEATPGPSQSTKRIR
DPVYPLSSTPATSSLSTGGGKMRRERTTARPSSKHPEDDEVVEVPTFPSISLPINKSSLP
TFSFASSLPTSTSISSSPSLTTFTPAKETITNKDPPKPSTSPCAPFTFSSPIVKATAASP
PSYSPSVGFTFSAPVAKLTPSMSNGKLTAPTAVAAKPVASKSTEEFEGPFKPAKTLKQGS
VLDLLKSPGFASPVVKNSPGANADPQNTSNLSKTTPTSSTSSSSLPPSSAGFGNLYSASV
NWSSEAPKLNSSPKSAESKKSANSAGQQSSSTSIGSTTLTTTGFSPIFSKPVGTWECDTC
LVSNKPDAVKCVACETAKPGTGLKPSLTFPPAFSAAKTTSTPSDPVSTISGFGDKFKKPE
GAWECDTCMVQNKAEDSKCVACTAAKPGASATVSSAASSAPGFGLLDKFKKPEGAWECDV
CLVQNQAADVKCVACQSTKPGAKVEPKAFGSFGSSAAGASSTTAPGGFKFGTSDSTAGSG
GFKFGTSESSSSSSSSSSSAGFKFGVPFGSSSSESSSKDNTASSGFKFGGSSEGFKFGAA
SSDDKKSDPPATGAAFKFGGSSGVTLGSGSSGTDNNSSSKSGFTFGLTNPAGTTPETTTS
SSSLTITPLSSLQENGDKAVSSTDTTSSITNPTTAVAKGSVFGRVGEPNLVTGTPQVGAT
FGSLQAGKEPAAPAFAFAKPEEKKEAAPSPAPSPFVFGAPKKEPDPAPSGGFSFGKQSAP
TEQPPPTFTFGKPAEKSETSSSEASKPPFSFGQSAADSTSDPKPAFSFLANNPPNATTST
SATPTSSLFGSGSTTAPASTSSSSAAPSTFVFGQPSSTTGDAPATKAFVFGQNQDNQAAA
PSSAPLNPASAPAPAQPFIFGASANAAAATAPTPAAPSFNFGAAAAAAPSAASSSAPSAT
PSPFGFSSAGSGGFGTNQAPSFASTFGSPFTATTAQTSAPAFGAKTNAAPVFGQQNNSTP
VFGSVTNSAPSGGFQFGGASAFGATNNSSGVFTFGGGSGASPAPSANPSIAPQPGSTGGG
FNFTQPPTFNMGSVKSFAASPAGQSTIAGRKIKTAVRRRK
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgggtggagggaaaattagaagcaggagatatcacatcgcttctaaacct
tacgccaagagcaagcagcaatctgggctcatcagtcgagtgacagacacagtgaagagc
atcgttccatcctggctgcagaaatacttcaagaatgaagatggtcctgctgagaagatg
ggacaagagacagagcagaactgccaaccacctcctcctaatggcaatgaagagggacct
cctcccattgatggacgtgactccccagaaccaagcaccagtaatacagaaccctcaacc
agccgggcatccctaaactttcaggagtacgtgctctccaggcctcctctgagtcgttct
catctccactttaccccaatggacgcttcttcccaaacaatgggagcctctagcagcctc
ttctctcagccctccacctcctcagcccctgggcccttttccacaggtttctccttggtc
aaagaaatcaaggacaacctctcacaacatgaagatgataacatctccacaacgagtggg
ttctcctcccgtgcatcagacaaggatgttccgacttccaaaactgcttcacttcctcag
ctttggtccccagagatggatagaacaagctctggaccccagcagtctcagtccagcctc
aaaaagccttcatttaacctgtctgtctttggaaactcctccaattccacattaaacagc
tccctgctgaactctagccagctgggagattctcctttctaccctgggaaaaccacgtat
ggcggagcagctgcagtcaggagctcccgtggtcgtcctggaacaccttatcaggcccca
gtgagaagacagataaaggccaaacctgcgggtgctcagccctgtggggtgacgagcgcc
actgcaaggcgaatcctgcagtcattagagcgtatgtccagccccctggctgatgcaaag
agaatcccagcagcagcaggttcccccagtcattccacttcaatggatggtttgactcaa
gatggctcccagtcaaagaaaaaacgaatggactcaaaccttcctccggtgcagaaactg
gtggttccaacgacaccttctgtttcaggaaatcgatccgtttctttcaggccaactttg
acaccaggaggaccccttagaaccctggacagggctgcaagagaaaagacgcctacaaga
caatcaccacaactacctgaagcaaccccaggtccctctcaaagcacaaaacgcatcagg
gacccagtctaccccctgtctagcacccctgcaaccagcagcctgagcactggaggggga
aaaatgagaagagaaagaaccactgcacggccttcatccaaacaccctgaagatgatgag
gtggttgaggtaccgacctttcccagcatttcactccccatcaacaaatcgtctttgcct
acattcagctttgcttcatctctgccaacgtccacctcgatcagctcctccccaagcctc
acaacttttactcctgctaaggagacgatcacaaataaggatccaccaaagccttcaaca
tcaccctgtgcaccttttacattttcctctcctattgtcaaagcaacagctgccagtcca
ccttcttactccccatctgttggtttcactttcagtgcacctgttgcaaagttaacaccc
tcaatgtcaaatgggaagctcacagcgcccacagcagtagcagcgaagcctgttgcaagc
aagagcacagaggaatttgaaggacctttcaaaccggccaagaccctgaagcaaggcagt
gtgctggatcttcttaaatcacctggttttgcctcccctgtagttaaaaattctcctggc
gccaacgcagatccccaaaatacatccaacctatccaagaccactcctacatctagcaca
agctcctcctctttgcctccttcctcggcaggatttggtaatttgtacagtgcctcggtg
aactggagcagtgaggccccaaagctgaactcctcacccaaatcggcggagagcaagaaa
tctgccaactcagcagggcaacagagcagcagcacaagcatcggctccaccactctaacc
acaacaggatttagccccatcttctccaaacctgtaggaacatgggaatgcgatacgtgt
ctagtgtccaacaaacctgacgcagtgaagtgcgtggcctgtgaaacagccaaacccggg
acaggacttaaaccctcattaactttccctccagccttttcagctgctaagactacatct
acaccctctgacccagtttccacaatcagcggttttggcgataagttcaaaaaaccagag
ggtgcgtgggaatgtgatacatgtatggtgcaaaacaaggcagaggacagcaagtgtgtg
gcctgcacggctgctaaaccaggagcttcagcaactgtctcttcagcagccagcagtgcc
ccagggtttggtctgttagacaagttcaagaaacctgaaggagcatgggaatgtgatgta
tgtctcgtgcaaaatcaagctgctgatgttaaatgtgttgcttgtcagtcgaccaaaccc
ggagctaaagtagaacccaaagcctttgggtcttttggctcctcagctgccggagcctcc
tctaccactgctcctggtggttttaagtttggcacatcagacagtacagctggatctggg
gggttcaagtttgggacttcagagtcgtcgtcatcgtcttcttcatcatcatcatcagcg
ggattcaaatttggagtcccgtttggaagctcttcttcagagtcctcctccaaagacaat
accgcctcatcagggtttaagtttgggggctcctctgagggttttaaattcggagctgca
tccagtgatgacaagaagtcagacccgcctgccacgggggctgctttcaagtttgggggg
agcagcggggtaactttgggaagtgggtcatctggcacagacaataactcttcttctaaa
agtggcttcacctttggactgactaatcctgcaggaacaacaccagaaaccaccacatct
tcatcttctcttaccataactcctctttcatctttacaagagaatggcgataaagcagta
tcttcaactgacaccacatcatctatcaccaacccaaccacagctgttgctaaggggtct
gtattcgggagagtaggtgagccaaatttggtgaccggcacaccacaggtgggcgctacg
tttggatctttgcaggcaggtaaggagccggctgctccagcatttgcttttgcaaagcca
gaagagaagaaggaggcagctccctctccggctccatcgcccttcgtctttggcgctcca
aaaaaggagccggatcctgctccatctggaggcttttccttcggaaagcagagtgctccc
acagaacagcctccacccacttttacgtttggcaaaccagcggagaaaagtgaaacatcc
tcttcagaagcctcaaagccacctttcagctttggacaaagtgctgcagattccacgtct
gatccaaaaccagcgttctcttttctggctaataatccacccaacgccaccacctcaacg
tctgcaactccgacttccagtttgttcggtagcggctccacaaccgctccggcatcaact
tcttcatcttctgcagctcccagcacatttgtttttggtcagccttcttcgactaccggt
gacgctcctgctaccaaggcctttgtctttggacaaaatcaggacaaccaggctgcagcg
ccatcaagtgctcctctgaacccagcgtctgctccagcaccagctcaacccttcatcttt
ggtgcgtctgccaatgctgctgctgctacagctcctactcctgctgctccctctttcaac
tttggagctgcagcagcggcggcgccctctgctgcctcttcatcagctccatctgctacc
ccgtcaccatttgggttcagttcagccggctccggtggttttggaaccaaccaggctcct
tctttcgcatcaacctttggatcccctttcacagccacgactgcccaaacctcagcccca
gcttttggagccaaaaccaatgcggcccccgtctttggacaacagaataactctacgcct
gtatttggttcagttacaaactctgcacctagtggaggctttcagtttggaggagccagt
gcttttggagccacaaataactcctcaggtgtgtttacatttggaggtggatctggagcc
tctcccgccccctctgccaatccctccattgcaccccagccaggatcaactggtggagga
ttcaactttacacaacctccaacatttaacatggggtcagttaaatcattcgctgcctcc
ccggctggacagtcaactatcgctgggcgcaagatcaagactgcagtgcgccgcagaaag
tag
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integrated database retrieval system
