Cyprinodon variegatus (sheepshead minnow): 107092620
Help
Entry
107092620 CDS
T06110
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107092620 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107092620 (nup160)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107092620 (nup160)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107092620 (nup160)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107092620 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
Motif
Other DBs
NCBI-GeneID:
107092620
NCBI-ProteinID:
XP_015242686
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MAAVLERSLVEICGFGREAERRFREVTVSPGVNAPPGGIKFPDSAGAFHYGESGKLLSVT
SDRFIHWCTSGDTVQLVEESLDTNLLNNAIRLKFSSCSVLPGGVTIQETLNNIIILICTN
QSVHRLVLPHPARMYRSELVTERHMQSIFTDVMKLDLQDSAHCALIPGLAGHTAVPGAVV
AWLNFHGEAHFALASPAGGITVVTLPPHDTQGSVSVVELKRSSMMRRISGWMPTAIRGDQ
SSPDLVLSLAVREEEEDSLIFALCQDHRLRMWSLTDQTCLLEADMLEYMPACKGVRRLSG
QGHRLRVAFSSRTGLCLCVYLGVPQRGQFIVLQLVGTDNNRYSLEHISSLFSTQESLVDF
TLTPTEVWALWLDESNSAVVKYINFEHNTAGQWNQVFVQPPPEEEVPVGVDLDPRETYLE
LLFSPLRFTASAIVRALQIFRRGSERVLDLSWENLKKEVTQAVESELQSSVTEFEFSQEE
YRQLQVEFWSRFYSCCLQYQEVESTPLGLTVSQNTGMACLLRKGFVSFLLPCFAVDHLYL
SYDQYLLSEEDTPISDDPDVARDILQLVRTLRLVSDAVSAEMAYEMEKALEYLQTPERAA
ELVLENMVCSDNDGVIEDIQNKLQDIRNPITAMMALLRELDLETESEIGGDGPVAPGLSV
RMSLSQLYGSSCAVSVVCQAVCHMAMTRAQFCRDMLILQKLYLHFGDNVFLGGGGQLLQL
QQDLIPRTSHLLSSYHLLKNISQSLASPVPMDTIDVNLQHLTALELSDTPTMSTGRSVLN
PQTVLELFYQTAARRIIISHIFSQQHTDSLLVWNHMISHVVQLLAQLLWPSNPGFQFPEC
LMANCQFTQLQDYVRLIGPWCQVNIGSCRFVLAQCYLANGEGHKALRCFQEAATEVEKED
FLMKLTGSEDDEAAASPRLQYYNKVLRLLEDVGLPELIIQFASLAIAEAEDDVHCQAALW
TRIFKHHLDLGHNSEAYEALTQNPDSSMQLDCLRQLVVVLCERSQLEDLVQFPYMNLHDE
VVGIIESRARGLDLLTHNYYELLYAFHINRHNYRKAGTVMFEFGMRLGREVRTRLGLQKQ
VNCYLAALNCLRLIRPEYAWIVQPVSGSTYGRPGASPKRNSDGDFPAEPAAGRRQVDILE
LQDLEKEYFLSRARLTLAQHHPPSAAIAGSASAQELVLLLVQAGLFDSALSLSRIFKLDL
SPIFDTLTFKCIQLQSGGEEPQSEAWSWLAANQLSVVNTKESSATDEAWRLLSSYLDRYP
STNGQHHRHVIHKLLSHGVPLPDWLLQSYKCMDAPSLLRLLLNFDLLEMAAELVLEYVDA
VLGRGHQYFGIERPLSATSPPAWLPYTAIDQLLHALSETQTHISLLKKVRDKLDEYHRVV
QQTTERRLAAQRRVAA
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttttggagcgcagtctcgtggagatctgcgggttcgggcgggaagccgaa
cggcggttccgagaggtcacagtgagtccgggtgtgaacgctcctccaggtgggataaaa
tttccagacagtgctggagccttccattatggcgagagcggcaagctgctgtccgtcacc
agtgatcgcttcatccactggtgtacgtcaggggacacggtgcagctggtggaggagtct
ctggacaccaacctgctgaataatgccatcagactgaagttcagctcctgcagcgttctg
cctgggggagtcaccatccaggagaccctaaataacatcatcattctgatctgcaccaat
cagagcgtccatagactggtgcttccccatcctgcccgcatgtaccgcagcgagctggtc
acagagcgccacatgcagtccatcttcactgatgtgatgaagcttgatctccaggactct
gcacactgtgccttaatccccggcttggctgggcacacggccgtacccggcgctgtggtg
gcatggctcaatttccatggagaagctcactttgctctggcttcaccggcaggaggcatc
accgtggtgacgctgccaccccatgacactcagggcagcgtgtcagtggtagagctgaag
agaagttccatgatgaggaggatctccggctggatgcccaccgccatccggggggatcag
agttcgccggacctggttctgagtctggcggtccgggaggaggaggaagattcactgatc
ttcgctctgtgtcaggatcaccggctgcgcatgtggtcgctcacggaccaaacgtgtctt
ttggaggcggacatgttggagtacatgccggcctgtaaaggcgtgaggcgactctctggt
caggggcaccgactgagggtggccttctcatccagaaccgggctctgtctctgcgtgtac
ctgggcgtcccacagagaggacagttcatcgtcctgcagcttgttggtacagacaacaac
cgctacagcctggaacacatctcctctctgttcagcacccaggaatctctggtggacttc
actctgaccccgacagaggtgtgggctctgtggctggacgaatccaactccgccgtggtc
aagtatatcaacttcgaacacaacacagcgggtcagtggaaccaggtgtttgttcagcca
ccaccagaagaggaagtcccagtaggagtggacctggaccccagggagacctacctggag
ctcctcttctcaccgctgcgcttcactgcatcagccatcgtcagagccttacagatcttc
cgaagaggatcagagagggtcttggatctttcctgggagaatctgaagaaggaggtgact
caggctgtggagagtgagctgcagagcagcgtcacagagttcgagttctctcaggaggag
taccggcagctgcaggtagagttctggtctcgcttctattcctgctgtctgcagtaccag
gaggtggagtccactcctctgggcctgacggtcagccagaacacggggatggcctgtctg
ctccgtaagggctttgtgtccttcctgctgccgtgttttgctgtggatcacctgtacctg
tcctacgaccagtacctgctgtctgaggaggacacgcccattagtgatgaccctgatgtg
gcccgagacatcctgcagctggtccggaccctgcggctcgtcagcgacgccgtctctgca
gagatggcgtacgagatggagaaggcgcttgaatatctgcagactcctgagagagctgcg
gagctcgtcctggaaaacatggtgtgcagcgacaatgatggcgtaatcgaagacatccag
aacaaactgcaggacatccggaaccccattactgccatgatggctctgctgagggagttg
gacctggaaacagaatcagagattggtggagacggacctgtcgctccaggtctgagtgtc
aggatgagcctgtctcagctgtacggcagcagctgtgctgtctccgtcgtctgtcaggct
gtctgtcacatggccatgacccgagcgcagttctgcagagacatgttaatactgcagaaa
ctctacctgcacttcggagacaatgtctttctgggtggggggggtcagctgctgcagctc
cagcaggatctgatccctcggacctcccacctcctctcttcctatcacctccttaaaaac
atcagtcagagtcttgcttctcctgttcccatggataccatagatgtgaacctgcagcac
ctcactgcactggagctgtcggacacgccgacgatgtcaacgggtcgatcagtgctgaac
cctcagacggtcctggagctcttctatcagacagcagccagaaggatcatcatctcccac
atattttcccagcagcatacagactctctgctagtctggaatcacatgatctctcacgtg
gtccagctgctcgctcagctgctttggcccagtaaccctggcttccagttcccagagtgt
ctgatggccaactgtcagttcactcagctccaggattatgttcgtctgatcggcccgtgg
tgtcaggtgaacattggttcatgtcgcttcgtgctggctcagtgctacctggctaacgga
gagggccacaaggctctgagatgtttccaggaggcggcgacagaggtagagaaggaagac
tttctaatgaagctgaccggaagtgaggacgatgaggcggctgccagtccgaggttacag
tactacaacaaggtgctgaggctgctggaggacgtagggctgcccgagctcatcatccag
ttcgcctctctggctatagcagaggcagaggatgacgtccactgtcaggcggcgctgtgg
accagaatcttcaaacatcacctggatctgggacacaacagcgaagcttatgaagctctt
acccagaaccctgacagcagcatgcagctagattgtctccgtcagctggtcgtggttctg
tgtgaacgatcccagctggaagatctggtccagtttccatacatgaacctgcatgatgag
gtggtcggcatcatcgagtctcgtgctcgcggtctggatctgctgacgcacaactactat
gagctgctgtacgccttccacatcaaccgacacaactacaggaaagcggggaccgtcatg
ttcgagtttgggatgcgtctcggtcgggaggtccggactcgcctcggtctccagaaacag
gtgaactgttacctcgctgcgctcaactgcctgcgcctcatccggcccgagtacgcctgg
atcgtccagccggtttctggaagcacgtacgggcgacccggagcgtctccgaaaaggaac
tctgatggagattttccagcagaaccagctgcaggtagacgacaggtggacatcctggag
ctccaagacctggagaaggagtacttcctgtcccgcgctcgcctcacgcttgctcagcac
caccccccctctgcagccattgcaggaagtgcgtctgctcaagaactggttctgctccta
gtccaagctggactctttgactctgccctgtctctcagtcgcatcttcaaactggatctg
agtccgatctttgacacgctaacctttaagtgcatccagctgcagtccgggggggaggaa
cctcagagtgaagcttggagctggttggctgctaaccagctatcagttgtcaacactaaa
gagtctagtgccaccgacgaggcatggcgactgctttcctcctacctggacagatatcct
tccaccaacgggcagcatcaccgtcacgtcatccacaagctgctttcccatggtgttccg
ctgcctgattggcttctgcagtcttacaagtgtatggatgctccctcactgctgcgcctc
ctcctgaactttgacctcttagagatggctgcagagcttgtgcttgagtatgtggatgcc
gtgctcggccggggacaccagtactttgggattgagcggccgctgtcggccacatctccg
cctgcctggcttccgtacacagccatcgatcagcttctccacgctctgagcgaaacgcag
acacacattagccttctgaaaaaagttcgagacaaactagacgagtatcaccgtgttgtg
caacagacaaccgaacggcgacttgctgctcagagacgcgtggcggcatga
DBGET
integrated database retrieval system
