Cyprinodon variegatus (sheepshead minnow): 107092660
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Entry
107092660 CDS
T06110
Name
(RefSeq) fibronectin-like
KO
K05717
fibronectin 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
cvg04518
Integrin signaling
cvg04810
Regulation of actin cytoskeleton
cvg04820
Cytoskeleton in muscle cells
cvg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107092660
04518 Integrin signaling
107092660
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107092660
09142 Cell motility
04820 Cytoskeleton in muscle cells
107092660
04810 Regulation of actin cytoskeleton
107092660
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107092660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107092660
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107092660
00536 Glycosaminoglycan binding proteins [BR:
cvg00536
]
107092660
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107092660
Membrane trafficking [BR:
cvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
107092660
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
107092660
Glycosaminoglycan binding proteins [BR:
cvg00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107092660
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
107092660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Fn3_PBP1
FN3_DSCAM-DSCAML_C
Fn3_VIN3
fn2
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
NDNF
Interfer-bind
Ig_ENGASE1_C
FN3_Tor_3rd
Ig_RIMBP2
Fn1_2
Motif
Other DBs
NCBI-GeneID:
107092660
NCBI-ProteinID:
XP_015242743
Ensembl:
ENSCVAG00000011892
LinkDB
All DBs
Position
Unknown
AA seq
2496 aa
AA seq
DB search
MSGHSALTRVLVALCVGSAVRCMPQEAHNNPQQYRPSSVSQDGCIENGRSYNVNEQWERR
YLSGTLICTCNGVAGIKCRSKPEEEKCYDKLGQKYYNVGETFESPRDGMIWDCTCIGSGK
GRISCTIANRCHDNGASYKIGDTWRRPHEGGYMLECVCLGNGKGEWTCKPVAERCVDQSV
GRSYVVGETWEKQYQGWMIIDCTCLGEGNGLITCTSRNRCNDQDTQTSYRIGDTWTKTDS
RGHQLQCLCTGNGRGEMKCERHASLHTTGLGTGSHLVTNIQPAVYHPVSVPELLEGPCKT
DSGLTYFNGQRWIKNQGNKKMICICMGNGVSCDQWDGPAPVYGGNSGGLPCVFPFVYKGK
TYHSCTSDGRSDGQLWCSISSDFEKEQKYSFCTEKNVAVMTRGGNSNGALCQFPFIYNGR
NYTDCTSDGRRDGMKWCGTTTNYDADHRFGFCPMTANEEVCTTTEGLMYRVGDQWDKRHD
VLGHMMRCTCVGNGRGEWSCVAYSQLKEHCLVDGVTYEVNQTFTKEHEEGYMMNCTCFGQ
GRGRWKCDAIDHCQDPETRTIYQVGESWDKVIQGVMYKCICYGNGVAEHGCEPQLSYPGG
HHPVQVIIAESGGQQNSHPVQWNTPASAHITQYILKWRVKDTATPWMEVIIPGHLNSYTI
SGLKPGITYEGQLISVLRFGHREITRFDFTTTYGSLIPSYGETTPLPPVVEISESVTEIT
SNSFVVSWVSASDTVSGFRVEYELIEQGQGTGQPFVLDLPRSATSVNINELLPGRKYNVN
VYEVTDGEETNLILTTSQTTAPDTPKEPEVEEVGDTSMTITWDKPLAPITGYRVVYVPSE
EGENTELTLPDTASSVTLSGLLPGILYNISIYAVEDSLESEPTFVQVKTTGETLPDNVNS
PSDLQFFEVSDTKIVLTWSSPVAGDVSGYRVTVSQVDDSDSPQSEMTLPVHQNSYVEVTH
LNPGTLYRFSVYTIYNGKESLPLIGEHATNPDAPTDIHFNNITEDSAVVLWFVPRAKITG
YRLLLTVEGSNPKQIHLPAHLTQHTLHNLQPDTEYNVTLYSEQGNTLSVGETAIFTTNSR
MGNAPQFNTDVTDTSIVISWSPVPRIGYKLSVRPSLGGEAPRDVISESGSIYISGLTPGV
EYTYSVQSVFDGQEQGTPVTRRVVTPLSPPTDLNLESNPGNSDITVQWNKPNTPDITGFR
VTCTPTSGQQGNSIEEFVEAGQNSCTLENLSPGVEYNVSVVTLKDDMESSPVSTVITPEV
PQLTDLTFEGVTDTSISLRWSPLSTTTVTGYKITVVASGDSIPIFEDMVMPSSGQYTVHG
LEPGIDYDISVTTVTEHGESEPTTITQQTSVPAPLGLNFGEVGPDSVEVTWESPQVPNPS
DINTFVIRYHPIDNEDQTLETTVGGDTNSLVLRNLVPNTEYLVSVMCVYEQRQSSPVVGI
IKTALDSPVGLRFSEITTNTFTVHWQAPRSRITGYRIRYQMVSGGRAKDERLPPSRNHYI
MTGLAPDTDYLVSIFAVSGGQESVPLSGTQKTISDAPTDLEVLDSTPTSITVRWAAPPVT
VRYYRITHGESGGHTKEFTVPGTKSTATISDLKPGTDYTITVYAVTGRGDSPASSIPIYV
THRTGVDSPSEMQVTDVNDSSITVRWSPAQGPIKGYKVTGTPRYGEGVSFTEVVAPDQTE
FTFSGLLPTAEYIFSVNALGQNGESSPLVVNAATNVDRPKDLTFTDVGSTALRITWDSPE
GFVTSYRVLYSSSEEGERELYPAPRGDAESAVIHGLQPGTEYTVKVIAVHGGTTSTPLIG
TQATAISPPTNLQFTEVGSTSFTMSWTSPGQENLITGLPGLTGYRVVVNPKKKSGPTKEI
SVAPDSTQVHIPGLMTATTYEVYVYALKNSLTSRPIQGEVTTLENISPPRRVRISEIKDS
SITLTWRAKAETISGFLIEAAPITASSGYIPIQRTIGPESRKYILEGLEPGTTYKVNLYT
LKGNGRSSPFELTASTAQPTVIPPTNIRFTSLNPTSISFMWEPSLSPRITGYYVTYEEAG
GLPQELIPRPHAGQSSATINGLKPGTEYVINIVALQNILRSKPLVGKARTQPASHHILVP
ELPQLAVPHRPTIDILDVPERFNDKIFDSNTVHLAGTSGQTQPDQHGQHIYTEYQNLGPN
VGLPSPYGGPKEGQRPTLREPLIYIPVAGPDGNRVPLVYETPLPGLAFGFPDNETELPQE
AKTMTTISWQPVPETTEYEVSCNPLTDLEEGGLQMRLPGTSNSATLIGLTSGASYNVVVE
AVTDGDKQKVLEEVVTVGNAVPDDLPVTPRGDVCYDTFTHTYHEVGSEWERMSETGFKLW
CRCMGLGSGHFRCDSSKWCHDNGNNYRIGEKWDRRAENGHMMSCTCLGNGKGEFKCEPHE
STCYDDGKMYQIGSQWQKDYMGAICTCTCYGGQQGWRCENCRRPGGQTNVEAEVLQPGGL
DAFQRYRENALRKLNIHCPVECFDPELLADAQSNLE
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcacagcgccttaaccagggtgctggtcgccctgtgcgtcgggagcgcagtg
cgctgcatgccccaggaggcgcacaataacccgcagcagtatcgcccttcctctgtctct
caagatggctgtatagagaacggtcggtcatataatgttaacgagcagtgggagcgccgc
tatttaagcggcactctgatttgtacctgcaatggagttgctgggattaagtgcagaagc
aaaccagaagaggaaaagtgctatgacaaactcggccagaagtactacaacgtgggagaa
acctttgagagcccaagggatggcatgatctgggactgcacatgtattggatccgggaag
ggcagaatcagttgcaccattgcgaatcgctgtcatgataacggggcctcatataagatc
ggagacacctggagaagaccccatgaaggaggctacatgctggagtgtgtctgtctgggt
aatggcaagggagaatggacttgtaaacctgtagctgagcgttgcgttgaccagtctgtt
ggacgatcctacgttgttggggagacatgggagaagcagtaccagggatggatgattatc
gactgcacctgtctgggagagggaaatggactgatcacatgcacatccagaaatcgctgt
aatgaccaggatactcagacctcataccgtattggagacacatggacaaagacagattct
cgtggccaccagctccagtgtctctgcacagggaacggccgtggggagatgaagtgtgaa
cgacatgcctcacttcacaccaccggcttaggcactggctctcatttggtgaccaacatc
cagcctgcagtctaccaccctgtctctgtaccagagctcctggagggaccctgcaagact
gactcaggcctaacttacttcaatgggcagcgctggatcaagaaccagggaaataaaaag
atgatctgtatctgcatgggaaatggagtaagctgcgatcagtgggatggaccagctcca
gtgtatggtggcaactccggaggccttccctgtgtgttcccatttgtttacaaggggaaa
acctaccactcctgtacttctgacgggcgtagcgatgggcagctgtggtgttctatttcg
tcggactttgagaaagagcagaaatattctttctgtacagagaaaaatgtggccgtgatg
acacgaggtggtaattcaaacggtgctctgtgtcagtttccattcatttacaatggccgg
aactacactgactgtacttcagatggtcggcgggacggcatgaagtggtgtggcaccaca
acaaactacgatgcggaccatcgctttgggttttgtccaatgacggcgaatgaagaagtg
tgcacaacaaccgagggtctgatgtaccgtgtaggtgaccagtgggacaagagacacgat
gttctcggtcacatgatgcgttgtacatgtgtcggcaatgggagaggagaatggagctgt
gtcgcttactcccagcttaaagaacattgtcttgtggacggtgtgacctatgaagttaac
cagactttcaccaaagaacacgaagaaggatacatgatgaactgcacctgctttggtcag
ggccgcggtcgctggaagtgtgatgccattgaccattgccaggacccagaaacaagaact
atctaccaggttggagaatcttgggacaaagtgatccaaggagtcatgtataagtgcatt
tgctatggcaatggtgttgcagagcatggatgcgagccccagctgtcatatcctggtggc
catcatcctgttcaggtaatcatagcagaatctggaggccagcaaaattcccatcctgtt
cagtggaacacaccagcttcagcccatataacccagtacatcctaaaatggagagtgaaa
gacacagctaccccatggatggaggttatcattcctggccatcttaactcctacaccatc
tctggactcaaaccagggattacatatgagggccagttgatcagcgtgctgcggtttgga
cacagagagattactcgctttgacttcaccactacttacggatcacttattccatcatat
ggagaaaccacacctctaccccctgtagttgagatctctgaatcagtgacagaaattacc
tccaacagcttcgttgtgtcctgggtttctgcctccgacacagtgtctggtttcagagtg
gagtatgagctgattgaacagggtcagggaactggacaaccttttgttttagatttgccc
cgttcagccacctcagtgaacattaatgagcttttgccagggaggaaatacaatgtcaac
gtctatgaagttacagatggagaggaaaccaacctcattctcactacttcacagacaact
gcacctgataccccgaaggaacctgaagtagaagaggtgggagatacttccatgacgatc
acctgggataaacccctggctccaattactggatatcgcgttgtctacgtgccatcagag
gagggtgaaaacacagagctgacactccctgatacagcatcatctgtgactctcagtggc
ctcctgccaggaatcctctacaacatcagcatctatgctgtggaagacagtctggagagt
gaacccacctttgttcaagttaaaactactggggaaacactgccagataatgtgaattcc
ccctctgacctgcagttctttgaggtgtctgacacgaaaatcgttctgacctggtcgagc
ccagtagccggagacgtgtcgggttaccgggtcactgtgtcgcaggtcgatgattctgac
tctcctcagagcgagatgactctacctgtccatcagaactcctatgttgaagtaacgcac
ctaaatccaggcacactctaccgcttcagtgtgtacaccatttacaacgggaaggagagc
ttgccactaatcggagaacacgccactaatccggatgctcccacagacattcatttcaat
aacattactgaggacagtgcagtggttctgtggtttgtacctcgtgccaaaattacaggc
taccgtctcctcctgactgtcgagggttcaaacccaaaacagattcacctgccggcacat
ctgacacaacacaccctccataacctgcagcctgacacagagtacaatgtcaccctttac
tcagagcaaggcaatacactgagtgttggagagactgccattttcaccacaaactcacgg
atgggtaacgcccctcagtttaacacagatgtcacagatacttccatagtaatctcctgg
tctccagttccccgtattggatacaagctgtcagttcggccaagtttgggaggagaagct
ccaagagatgtcatctctgaatcgggaagtatttatatttctggtctgactcctggagtg
gaatacacatacagcgtccagtcggtttttgatggtcaagaacaaggaaccccagtcaca
cggcgtgtcgtcactcctctgtcacctcctactgatctgaacttggaatccaacccagga
aacagtgacattaccgtccagtggaacaaacccaacaccccagacataacaggcttcaga
gtgacatgcactcccaccagcgggcagcaaggaaacagcatagaggaatttgtggaggct
gggcagaattcctgcactctggaaaacctgagtcccggggtggagtataatgtcagtgtc
gtcactttgaaagatgatatggaaagctctcctgtatcaactgtcattaccccagaggtt
ccacaactgaccgacttaacctttgagggggtgactgacacaagcatcagccttcgctgg
tcgccactcagcaccacgaccgtcacgggttacaagatcacggtggttgcatcaggcgac
agcatccccattttcgaggatatggtcatgccgagctcaggccagtacacagtgcatgga
cttgaacctggcatcgactatgacataagcgtgacaacagtaacggagcacggcgagagc
gaacccaccaccatcactcaacaaacctccgtaccagccccccttggtttgaactttggc
gaagttggaccagacagtgtcgaggtcacatgggagtctcctcaagtcccaaacccctct
gacattaacacctttgttattagataccatcccatcgacaatgaagaccaaactttagaa
accacggttggaggcgatacgaatagtttggttctgaggaatttggtgcctaacacagag
tatttggtgagcgtgatgtgtgtttatgagcagaggcagagctctcccgttgttggtatc
ataaaaacagctctggattccccagttggcctacgtttctctgaaatcactaccaacacc
ttcactgtacactggcaagccccccgaagcagaatcactggttaccgcattcgctaccag
atggtcagcggtgggagggccaaggatgagaggctgcccccttcaagaaaccactacatc
atgactggccttgctccggacactgactacttagtcagcatctttgctgtgagcggggga
caagagagcgtcccgctcagtgggacacagaaaaccatttctgatgctccaactgacctg
gaagtgcttgactctacccccacgagtatcaccgttcgctgggccgcaccaccggtcaca
gtgcgctactacaggattactcatggagagtcaggtggtcacactaaggagtttactgta
cctgggaccaagtccactgctacaatcagtgacctaaagcctggcactgattacaccatc
acagtttatgctgtgacaggcagaggagatagtcctgcttccagcattcccatctatgtt
acacatagaactggagtggactctccctctgaaatgcaggtgacagatgtgaatgacagc
agcattacagtgagatggagtccagcccagggtccaataaaaggatacaaggtcaccggg
accccaagatatggagagggagtgtctttcactgaggtggtggccccagatcagactgag
tttactttctcaggcctgctgccgacagcagaatatatttttagtgtgaatgccctgggt
caaaacggtgaaagctctcctctagtggtgaatgctgctacaaatgtagatcgtcccaag
gaccttacctttacagacgttggttccactgccttacggatcacctgggatagcccagag
ggatttgttacgtcctaccgtgtcttgtattctagttcagaggaaggagagagagagctg
tatccggctccaagaggagatgctgagtcagctgttatccatggactccagcctggaact
gaatatacagtaaaggtcattgccgtgcatggaggcacaaccagtactcctctgattggg
acgcaagctacagctatctctcctcctaccaacctccagtttactgaggttggctcaaca
tcgtttactatgagctggacttcgcctggtcaggaaaatctgataactggtctacctggc
ctcactgggtaccgtgtggtggtaaacccaaagaagaagagtggacccactaaagagatc
agtgtggccccggacagcacgcaggtccacatccctggactcatgactgcaacaacctat
gaagtctatgtgtatgccttgaagaactctctcaccagcagaccaatccaaggagaggtc
accactctggaaaacatcagtccgcctcggcgtgtacgtatatctgaaattaaagattcc
tccatcaccctcacttggagagcaaaggctgagacaatctctgggttcctgattgaagcc
gcgcccatcaccgcctcttcaggctacatccccattcagaggaccatcggccctgaatcc
cgcaagtacattctggaaggtctggagcctggcactacttacaaggttaacctctacacg
ctgaagggcaacggacgaagctcgccttttgaactcactgcttccacagctcaaccaaca
gttatcccacccaccaacattcgctttacctcactgaatcctaccagcatctcctttatg
tgggagccatcactcagtcccaggatcaccggctactatgtcacttatgaggaggctggg
ggtttgcctcaagagctcattcctagacctcatgcaggccagagctccgccaccatcaat
ggtcttaaaccaggaacggaatatgttattaacattgtagcactgcagaacattttgaga
agcaaaccgcttgtgggcaaagccagaacgcaaccagccagtcatcacattttggtacct
gaactgccgcaacttgctgttcctcatcggcccaccattgacattcttgatgttccagag
cgcttcaatgacaaaatttttgactcaaacaccgtccacttggccggcacaagtggacag
acccaaccggaccagcatggtcagcacatttatacagagtaccagaacttgggcccaaat
gttggacttcctagtccctatggtggacccaaggaaggccagagaccaactctcagagag
cccctgatttatattcctgtagctggtcctgatggaaaccgagtacccctggtgtacgaa
acccctttgcctggtctagcttttggtttccctgacaacgaaacagagcttccccaagaa
gcaaagaccatgacgaccatttcatggcagcctgtccctgaaaccacagaatatgaagtg
tcctgtaaccccttaacagatctggaagaaggaggccttcagatgcgtcttccaggcacc
tccaacagcgccacgctgatcggactgacgtctggtgcgtcctacaatgttgttgtcgaa
gccgtaactgatggagacaaacagaaagttctggaagaagtcgtcactgttggaaatgca
gttccagatgaccttcctgttacccccagaggagacgtgtgctacgatacatttacacac
acttaccatgaagtgggctctgagtgggagcgcatgtctgagactggcttcaagctgtgg
tgccgatgcatggggctcggcagtggtcactttaggtgtgattcatccaagtggtgtcat
gacaacggcaataattaccgcattggagaaaagtgggatcgccgtgctgagaacggtcat
atgatgagctgcacctgcctgggcaacggcaaaggagaattcaaatgcgaaccacatgag
tcaacttgttatgatgacggaaaaatgtaccagattggaagccagtggcagaaggactac
atgggtgctatctgtacatgtacatgctatggaggacaacagggttggcgatgcgagaac
tgcagaaggcctggaggacaaaccaacgtggaagctgaggttttgcagccgggtggctta
gatgccttccaacgctacagagaaaatgctctacgtaaactgaacatccactgtccggtt
gaatgtttcgatccagagctgctggcagatgctcagagcaacttagagtag
DBGET
integrated database retrieval system
