Cyprinodon variegatus (sheepshead minnow): 107092728
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Entry
107092728 CDS
T06110
Symbol
reln
Name
(RefSeq) LOW QUALITY PROTEIN: reelin
KO
K06249
reelin [EC:3.4.21.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107092728 (reln)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107092728 (reln)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Reelin_subrepeat-B
EGF_Teneurin
EGF_TEN
EGF_2
Reeler
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
107092728
NCBI-ProteinID:
XP_015242843
Ensembl:
ENSCVAG00000004991
LinkDB
All DBs
Position
Unknown
AA seq
2917 aa
AA seq
DB search
MAMVRAFLGGVLGCVWLSLALGSSNVDFGAPPASFYPRFNPFFFLCTHHTEMEGVGVAEG
GGEVLLTLQITGSPPTYTPGQEYQVTISTSVPFDGLLVTGLYTSTPVQSAPIPAPAAFGF
GVIPDRQFTGTQFVCSVVASHVSHQPSTSFSFVWIAPPPGTGCVNFLATATHRGQIIFKD
ALAQQLCEQGAPTESPLRPNLMELHAKHAVLRDDFDSNMQDELDPNIWSDCSNCEVGDQC
GVLMHGRAVTFCEHFGERELTTVPLNTSTASALQFALGSGSCRFSYSDPSITVSYSLSGN
ANTSDDWITLEKIRAPTNSSTVIHLVPLPHSSRGEGIRLRWSQETPHGPEGYESCWGLDN
VLLVNSAHRVPLIEDNLDPLDTANWLFFPGATIKHACQSDGNALYFHGGEGVAHSFASTR
DIDLHREEGRSYWEEDFESPPLNWDIEGATYGTKCGEIESGEALVFEKEGRRRVCTPYLD
TTSYGNLRFHFTMGGGDCDPGESHDNDVILFGRSEGRRERLILDTLPYSSYRTPSVVSVA
LPSELQTPVTQFCLEQRSHGGANRHVWAVDFMQLLPVLPGTHTHVAQFSINLGCGSYQPA
NSVSLEFSTNLGRSWSLLHTECLPELCAGPHLPHSTIYSSDNYSGWTRISIPLPNAALTE
TTRFRWKQSGAGTGNMWAIDNVYIGPACLRFCSGRGHCSRTGCKCDPGFSGPACELASQT
FPAFLSEGFSSPRLSSYHSFSSLRGAEVSFGCGVLASGKALVFNRDGRRHLVTAPLDSSQ
ARYLQFTLRLGSRSILSSCPAPDQPGEGVLLHYSSDNGITWTLLRHYAYQGFHEPRIVSV
ELPSGARKFGVQFRWWQPYHSGRGHDVWALDEISMTSVLFNTISLDFSNVLDVTQSLGFY
LGNVQPYCQHDWTLSFSGEPSPGFSIRYVETQSMQIGASYSLQFSLVMGCGREPSPHIDT
QVRLEFSTNHGLTWHLVKEACLPGMPSCSEFTAPSVYHPSEFKDWRRVTLSLPQKTWSSA
TRFRWIQNYYGEQDEWALDDIYIGQQCPNMCHGHGWCDHGHCRCDDGFSGQDCQPSSPLS
SSVLSDFESQDALLATWQEVIGGEVVAPDMGCGVVSSGSSLYFSKAGLRQLVSWDLDTEW
AEFVQFYLRVGGDWAECNQADSREEGVLLQYSNDGGITWGLIAEMYFTDFTKPRFVHYEL
PLASKTPSTRFRWWQPLHSGEGYDQWAIDDVIILSEREKHIIPMANPTLPQVSKTRFRWF
QESSVYRDAPPFALDGVYISEPCPNHCGGHGDCISGVCFCDMGYTVEQDSCVPSVVSPTE
LTEGFEGKLSPLWQSISGGQIGGGCGIISEGKALYFSSAGRREARTDPLDTTNTRLAQFY
IRIGSKSLGPTCTRPRSRNEEKPRYAESWDFEVTGSSFLQFELSMGCSKSTSFSHGVRLE
FSTDCGRHWTLITPECVPPAIGCAGYTQSSVYTSTQHKHWRRITVYLPSAANSPRTRFRW
IQTHFTPGAEGWALDNVLLAPGCPWMCSGHGLCDNGRCVCDKGYGGAHCVPLAPLPSVLR
EDFNENLQQETWPEVYGAERGTLSGEPLKSGTALIFKGDGLRMIVSRDLDCSNTLYIQFS
FKFITKGVPERSHSVLLQYSVNGGISWLLLDEFYFPASTDTLFLHLPLPPSAQTNATRFR
LWQPYNSGKKEEVWVIDDLIIDGSSIHKPPMVIDTFEEGPNEENWLFYPGGNTGLYCPYQ
KSGLEEDESAMVFISSELGEHSITTRDIDVNENTIIQFEINVGCTTESSSVHPVRLEFSR
DFGATWHLLVPLCAGGPQPSSLCSTELHPASVYFPGTTHGWRRELIHVGKFRLCGSIRFR
WFQGFFSAGSAPPTWALDNVYIGPQCQDMCNGHGACVSGTHCVCDPGFSGPDCSLPDTPN
PDFLKEDFEGGAVDAEHFTLLSGGKPSRKCGIMSSGNHLFFSEDGLRMLVTNDMDLSNAR
FVQFFLRLGCGKAAPDPRSQPVLLQFSVDGGLTWGLLQEFLFSNTSNQARLVALEIPLRA
RTTATRLRWWQPSENGHFYSPWVIDQVVVGGSASGWGPLEDDFSSIDGRSWLLHPGGTRM
PVCGSDGPAFAFIEKSNTRYAVTTDISLGQDAFIQFDFSASCSVTNSCYSVELEYSLDLG
LSWHPLVRDCLPTSPDCSSYTLQRILVSDVYNKWGRVTLSIPSYARSPATRFRWFQQAPF
DKQQTWALDNLYIGDGCPDMCSGHGRCQQSSCVCDPEWGGEYCDEPVLPLPSQLKDSFSR
APSLSHWHVLTGGKLSSVCGAVASGAALHFSGSCTRQLVTVDLNLTNAEFIQFYFMYGCM
IPPSNRNQGVLLEYSLNGGINWHLLTEIFYDLYTKPGFVNVLLPPAARQEGVRVRWWQPQ
HDGADRSDWALDNVLIAGSDPRAQISDTFGGVALPNHERAPADETSGRFGQLNEQGETPI
VSDHWLFSEDCSVQRFCNSPDGVMVCGNADGREVYAVTHDIVPDKGWVMQFKIAVGCSVP
DRPADRQVHVQYSVDFGVTWKYLVPQCLPADPRCGGQVSQPSVFFPAESWKRAVYPLPDS
LAETAVRFRFYQQHSDIQWGVENLYIGPPCNSHCGGHGDCLDQRCICDPGFTGPNCYASS
ALKVAYNRIYVTFRERIKLRYSLQCVSWTLLHEMDYLKYVSVRRDYIVLPEGALTNATRL
RWWQPFTISSGLATPSLERAQWAIDNILVGGSDINPSTLLDTFDDEGVSHEESWSFYPNA
VRTAGFCGNPSFHLYWPNKNQDRTHNILATRELIVQPGYILQFKIVVGCEADTCDDHHSV
LLQYRKDARXDSKRKTQHETFNGIRSCFLCREARVKGVMLRWWQPRHDGAGHDQWALDHV
EVVLVSTRKQNYMMSFARQTGMRHYYSRKRRALQQQA
NT seq
8754 nt
NT seq
+upstream
nt +downstream
nt
atggccatggtgcgggcctttcttgggggcgttttgggctgtgtctggctttccctggcg
ctggggagcagcaatgtggatttcggggcacccccggcgagcttctacccccgttttaac
ccgttcttcttcctgtgcacccatcacacggagatggaaggagtcggggtggcagagggt
ggtggggaggtgttgctgaccctccaaatcacaggaagcccccctacttacacccctgga
caggagtatcaagttaccatttctactagtgttccctttgatggtctgctggtgactggc
ctctacacgtccacaccagtccagtctgctcccattcctgccccagctgcgtttggattt
ggtgttataccagaccgacagttcactggaacccagtttgtctgcagtgttgtggcttct
catgtcagccatcagccctccaccagcttcagttttgtttggatcgccccgccacctggc
actggctgcgtcaatttcctagccacagcaacacatcgaggacagatcatttttaaggat
gcactggcccagcagctctgtgagcaaggagctccaactgagtcccctctgcgacccaat
ctcatggagctccatgcgaaacatgctgtgctacgagacgactttgactccaacatgcaa
gatgagttggaccctaacatatggtcagactgcagtaactgtgaggtcggagatcagtgt
ggtgtgctgatgcatggcagagcggtgactttctgtgagcactttggagagcgagagctg
accactgtacctctgaacaccagcactgcctcagctctgcagtttgccctgggctcgggt
tcctgccggttcagttactctgatcccagcatcacggtgtcatacagcctgagtggcaat
gcaaacacctctgatgactggatcacgctggaaaagatcagagctcctaccaatagcagc
accgtcatccatctggttccgctcccgcattcctccagaggcgaaggcatccgtctccgc
tggtctcaggagaccccccacgggcctgaaggatatgagtcctgttgggggctagacaat
gtgctgctggtaaattctgcccacagagtgcccctgatcgaggacaacctggatcccctg
gacacagccaactggctcttcttccctggagccaccatcaagcacgcctgtcagtcagat
ggcaatgcgttgtatttccatggcggtgaaggagtcgcacatagttttgcttcgaccaga
gacatcgatttgcaccgagaagaggggagaagctactgggaggaagactttgagtcccca
cctttaaactgggatatagaaggagcaacatacgggacaaagtgtggagagattgagtca
ggtgaggcgctggtgtttgagaaggagggtcgaagaagagtgtgtaccccctacctggac
accacatcttatggaaacctccgcttccactttaccatgggtggtggtgactgtgatcca
ggggagtcacatgacaatgacgtgattttgtttggaaggtctgagggcaggagggaacgt
ttgattctcgatacgcttccgtattcatcttacaggactccttcggtagtatcggtcgcg
ctgccatctgagcttcaaacaccggtcacacagttctgcttggagcagcgttcccacgga
ggcgctaaccgtcatgtgtgggccgtggattttatgcagctgcttcctgtgttgccaggc
acacacacacatgttgcccagttctccataaaccttggctgcggctcctaccagcctgca
aacagtgtgagtctagagttttctaccaatcttggtcgttcctggtctctgctccacact
gagtgcctgcctgagctctgtgctgggccacatctacctcacagcaccatctactcctca
gacaactacagcggatggaccagaatctccatccctctgcccaatgctgccttaacagag
acgacccgctttcgctggaagcagtccggcgctggaacaggcaacatgtgggccatagac
aacgtttatattgggccagcttgtcttcgtttctgctctggaagaggacattgctcccgc
acaggctgcaaatgtgacccgggcttcagcggtccagcttgtgagcttgcatcccagacc
ttccctgctttcctttccgaaggtttctccagcccccgtctctcctcctaccacagcttc
tcctccctgcgcggggctgaagtcagctttggctgcggagtgctcgccagcggaaaggct
ctggtctttaacagggatggcaggagacacttggtcactgcaccgcttgacagttcccaa
gccagatacctccagttcactctgcgccttggtagccgcagcatcctgagctcctgccct
gctcctgaccagccgggcgaaggtgttttgttgcattactcttcagacaatggcatcacc
tggacgctgctgcggcactatgcataccaaggcttccacgagccaaggattgtgtcagtc
gagcttccatctggtgctcgtaagtttggggtgcagttccgctggtggcagccataccat
tcgggacgtggccacgatgtttgggctttggatgaaatcagcatgacctctgttctcttc
aacaccatcagtcttgacttcagcaacgtgcttgatgtcactcagagtctgggcttttat
cttggcaatgtgcagccatactgccagcatgactggactctcagtttctccggtgagcct
agtcctggctttagcatccgttatgtggaaacgcagtcaatgcaaatcggcgcctcctac
agtctgcagttctccttggtgatgggttgtggccgtgagccgtcacctcacatcgacacc
caggtccgtctggagttctccaccaatcacggcctcacctggcacctggtcaaggaggcc
tgtctacctggcatgccgagctgttcggagtttacagctcccagtgtctaccatccctca
gagttcaaagactggagacgtgttacgctttctttgcctcagaagacgtggtccagtgcc
acccgattcagatggatccagaattactatggagagcaagacgagtgggccctggatgac
atctacatcggccagcagtgtcccaacatgtgccatggacatgggtggtgcgaccacgga
cattgcaggtgtgatgacgggttctccggacaggactgccagccatcgtccccactctcc
tcgagtgtcctctcagactttgagtcccaggacgcactactagccacatggcaggaggtg
attggtggagaggtggtggcacctgacatgggctgtggggttgtctcatctggatcatcc
ctctacttcagcaaggctgggctgaggcagctggtgagctgggatttggacacagaatgg
gcagagtttgttcagttctacctacgggttggaggagactgggcagagtgcaaccaggca
gacagcagggaggaaggagtcctgctgcagtacagcaacgatggaggaatcacctggggc
ctcatcgctgagatgtacttcacagacttcaccaaacctcgatttgtgcattatgaactt
ccccttgcttctaaaacaccctccacccgttttcgctggtggcagcctcttcattctggg
gaagggtacgaccaatgggcaatcgatgacgtcatcattttatctgaaagagagaaacac
attatcccaatggccaatccaactctgccgcaggtcagtaaaaccaggttccgttggttc
caggaaagcagcgtttaccgagatgcacccccatttgctttggatggagtctacatttcg
gagccctgccccaaccactgcgggggacatggagactgcatctctggcgtctgcttctgc
gatatgggttacacagtggagcaagatagttgtgtcccgtctgtagtcagtcccacagag
ctgacggagggctttgaggggaagctgagtcctctctggcagagcataagcggggggcaa
atcgggggcggctgtggcatcattagcgagggaaaagctctctacttcagcagtgctgga
aggagggaggcacgaacagaccctctagacaccaccaacacacggttggctcagttctac
atccgaatcggcagcaaaagtttaggacccacctgcaccaggccacgctcccgcaatgaa
gaaaaaccaagatatgcagaaagttgggactttgaagtgaccggctcctccttcctccag
tttgagctgagtatgggctgcagtaagtccacgtccttctcccacggggtccgattggag
ttttcaacagactgcggtcgccactggactcttattacccctgagtgcgtgcctccagcc
atcggctgcgctggttacactcagagctctgtctacacgtcaacccaacacaaacactgg
aggagaatcaccgtctacctgcccagtgctgctaattcccccagaactcggttccgttgg
atccagacccacttcaccccaggagcagagggatgggcgctagataatgtgttacttgcc
cccggttgcccatggatgtgctctggacatgggctgtgtgacaatggacgctgtgtatgt
gataaagggtacggaggagcgcactgtgtacctttggccccgctgccgtcggtgctaagg
gaagactttaatgagaatctgcaacaggagacctggcctgaagtttatggagcagagaga
gggaccctcagtggggagccacttaaatctggcactgctcttattttcaaaggagatgga
cttcgtatgattgtttcaagggacctagactgctctaacactctctacatccagttctct
ttcaagtttataaccaaaggagtcccggagcgctcccactcggtgctgttgcagtactct
gtaaatggaggaatcagctggctcctgctggatgagttttacttcccagcttccacagac
actctgttcctccacttgcctctgccacccagtgctcagaccaatgccacccgtttcaga
ctgtggcagccttacaacagcggtaaaaaggaagaggtgtgggtgatagatgatctcatc
attgacgggagctccatacacaaaccaccgatggtaatcgacacttttgaggaaggcccc
aatgaggagaactggcttttctaccctggtggaaacactggcctctactgcccctaccag
aagtccggcctggaagaggatgagtcagccatggtgttcatctccagtgagcttggagaa
cactctatcaccaccagggacattgacgtcaatgagaacaccatcatccagtttgagatc
aacgtaggctgtacaactgagagctcctcggtgcacccagtacgcttggagttttccagg
gactttggagctacttggcaccttttggtgccgctgtgcgctggcggtcctcagccctcc
tccctttgctctacagaacttcatcctgccagcgtatatttccccgggactacacatggc
tggaggagagagttaatccatgttggcaagtttcgcctgtgtgggtcaataaggttccgc
tggtttcaaggtttcttctcagctggttctgctcctccaacatgggcactagataacgtg
tacataggcccacagtgtcaggacatgtgtaatggtcatggggcatgtgtgagcggcact
cattgcgtctgtgaccctggtttctctggaccggactgctctctgcccgatacccccaat
ccagacttccttaaggaggactttgaaggaggagcggtggatgctgagcatttcacactt
ctgagtggaggtaaaccatccaggaaatgtggcatcatgtccagtggaaaccacctgttc
tttagcgaggacggtctacgcatgttggttacaaatgacatggacctctcaaatgcaagg
tttgttcagttcttcctccgtctcggatgtggcaaagcggcaccggaccctcgttctcag
cctgtgctgctgcagttctctgtggatggaggtctaacctgggggctcctgcaggagttt
ctcttcagtaataccagtaatcaggctcgactggtggccttggagatcccgctgcgtgcc
agaaccacagctacccgtctgcgctggtggcagccgtctgaaaatgggcatttttacagc
ccatgggtcatagatcaggtggtagtgggtggtagtgctagtggctggggaccactcgaa
gatgatttctcctctatcgacgggcgctcatggcttctccaccctggcggaacccgaatg
ccagtctgtggctctgacgggcctgcgttcgcattcattgagaagtctaacacacgatat
gctgtcactactgacattagtttgggccaagatgctttcatccagtttgacttctctgca
tcctgctctgtcaccaattcttgctactctgtggagttggagtattctctggatttgggt
ctgagttggcaccctttggtccgggactgcctgcctacaagtccagactgctcctcctac
actttgcagcggattcttgtttcagatgtctacaacaagtggggccgcgtcactttgtct
attccatcatatgcaagatctccagccacaaggttccgctggttccaacaggctcccttt
gataagcagcagacatgggctctggataatctctacattggtgacggttgtcctgacatg
tgttctggacacggacgctgccaacagagctcctgtgtatgtgacccagagtggggagga
gagtactgtgacgagccggtgcttcctctgccgtctcagctgaaggacagcttcagtcga
gctccctcactcagtcactggcacgtcctcaccggtgggaagctcagctctgtgtgtgga
gctgtggcttctggagctgccctgcacttcagtgggtcttgtacccgtcagctggtgaca
gtggacctaaacctgacaaatgcagagttcatccagttctactttatgtatggctgcatg
atccctcccagcaatcgcaaccagggtgtcctcctagagtacagcttgaatgggggaatt
aactggcatttactgacagagatcttctatgatctctacaccaaacctggctttgtaaat
gtgctactgccccctgctgcacgtcaggaaggagtgcgggtgcgctggtggcagccacag
catgatggtgcagaccgaagcgactgggccctggataacgtcctgatcgcaggctcagac
ccaagggcccagatctctgacacattcggaggggtggctctgcctaaccacgaaagagct
cccgccgatgaaacgtcagggaggtttggtcagctgaatgaacagggagaaacaccaata
gtgagcgatcattggcttttctctgaggactgctctgtgcagcgcttctgcaactctcct
gatggggtgatggtgtgtggaaatgctgatggtagagaagtttatgcagtcacacatgat
attgttccagacaaaggctgggtcatgcagttcaagattgctgtgggctgcagtgttcca
gaccgaccggctgatcgacaggttcacgttcagtattcagtcgattttggagtcacatgg
aagtacctggtccctcagtgcctgcccgctgacccccgctgtggtggtcaggtgtcccag
ccttcagtcttcttccctgctgagagctggaaaagggcagtctatccgctgccagacagc
ctggctgaaactgcagtgcgatttcggttttaccagcagcactctgacattcagtggggg
gtagagaacctgtacatcgggccgccttgcaacagccactgtggaggacatggagactgt
ttggatcagcgctgcatttgtgatccaggattcacaggaccaaactgttatgccagttct
gcacttaaggtagcttataatcgaatatatgtcacatttagagaaagaattaagcttaga
tatagtttacagtgtgtgtcgtggacactgctacatgagatggattacctcaaatatgtg
tcagtgaggagagattatattgttctaccagagggggctctaactaacgctacacgcctg
cgatggtggcagcctttcaccatctcttcaggcttggctaccccaagcctagaaagagct
cagtgggcaatagacaacatcttggttggaggatccgacatcaatccatccacacttctg
gacacctttgatgatgagggcgtttctcatgaagaaagctggagcttctatcctaacgcc
gtgcgcaccgctggcttctgtggaaatccctcatttcacctctactggccgaacaaaaac
caagacaggacacataacatcctcgctacccgagagcttatagtgcagcccggatatatt
ttacagttcaaaatcgtggttggctgtgaggcagacacatgtgatgaccatcactctgtc
ctgctacagtacagaaaagacgcacggtaagattcaaagcgaaaaacccagcatgaaaca
tttaatggcattagatcatgtttcctctgcagggaagcgagggttaaaggggtgatgctg
agatggtggcagccaagacacgacggtgcaggacatgaccagtgggcgttggaccatgtg
gaagtagttcttgtcagcacgcgtaaacaaaactacatgatgagctttgccagacagacc
gggatgcgtcactactacagccgcaagcggcgggcactgcagcagcaagcctga
DBGET
integrated database retrieval system
