Cyprinodon variegatus (sheepshead minnow): 107092747
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Entry
107092747 CDS
T06110
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107092747
03037 Cilium and associated proteins [BR:
cvg03037
]
107092747
Transporters [BR:
cvg02000
]
Other transporters
Pores ion channels [TC:
1
]
107092747
Cilium and associated proteins [BR:
cvg03037
]
Other cilia and associated proteins
Stereociliary proteins
107092747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
107092747
NCBI-ProteinID:
XP_015242867
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MPPKRRNHEIVDVENVGIDVDAEPESDSEEEARKRSRNRRSKSQLRAKKISEDEDDEEDE
EEETPKRRGRRKVTKTDDDEDETPQRRGRRKKTKIQDSDEEDEGDKRRAARKGSKATKKK
ASKEESDEESEEDRVSRKKAGRSVSKKEKEEQNNGKKANVKGKDEEDKNNKKKKKKKMSS
SSSSSSSSSDSDEESLSEGEIEALKEQVEEKKKLIATLRNKPWRMQKRLSLLKEAQEFVE
KFEGALGKGKGRRLYAFKVMMTKKLIKFNRDFENFKTACIPWERKIKEVESHFGSSVASY
FLFLRWMYGVNLVLFGFMFGLVVLPEVLMGLPYGSIPRKTVPREEQDTAMDFSVLLDFGG
YCQYSILFYGFYNNDRTIGLLKFRLPLSYLLTSVGIFGYSLLVVIRTMARNANEGGDGGE
EGDFIFSWKMFTSWDYLIGNPETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVF
ANFLILCSLGGSGYLIYFVVKRSQDFAKVDPKTLTWFEKNEVEFVMSLLGLVCPPLFETI
AELEDYHPRIALKWQLGRIFALFLGNLYTFLFALFDEVTAKLETEKSIKNATEWAYQQYF
ANYSLFYNTTDVPPPNVAPADVIRGPCWETGVGREFVKLTVSDVQVTYLTILVGDFARAV
IVRFLNYCWCWDLEAGFPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLTS
MYYQSWAVMACNVPHERVFKASRSNNFYMGLLLLVLFLSLLPVVYSMMTLAPSFDCGPFS
GQEKMYDVVIETIEQDLPAFIGNIFTYASNPGLIMPAILLMILAIYYLNTVSKAYQQTNI
DLRKKMKMAREDEKNRRNNKDSTNQVMKDLEDLLPNKSLAPPPAEEEKVSEVVVDKHSKS
TKTKPGTAGKGVNVQKEVSLAAPNPKGPVTRAPGPRGGLPGNMRSPQPGPGRGRGQTAAP
RR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaaaaaggagaaaccatgaaatagttgatgttgaaaatgttgggattgatgtg
gatgctgagcctgagagtgacagtgaagaagaggcaaggaaaagaagtcgaaacaggaga
tctaagtcgcaacttagagcaaagaaaatcagtgaagacgaggatgacgaggaggatgag
gaggaggagacacctaaacgacgaggacgaaggaaagtgaccaagacagatgatgatgag
gatgagacccctcaaagacgaggacgaaggaagaagaccaagatccaagacagtgatgaa
gaggacgagggagacaaacgaagggcagcaaggaagggatcaaaagccaccaagaagaaa
gcttctaaggaagagagcgatgaggaaagtgaggaagatagagtcagcagaaaaaaagct
gggagatctgtgtccaaaaaggagaaagaggagcagaataatggcaagaaggcaaatgtg
aaagggaaagatgaggaggataagaacaataagaagaaaaagaagaaaaagatgagcagc
agctcttcctcctcttcttcatcctccgactctgatgaggaatcattgtcagagggagaa
attgaagctctgaaggaacaggtggaggagaagaagaagctgattgctactttaagaaac
aaaccatggcgcatgcagaagaggctctcactgctcaaggaggcccaggaatttgttgaa
aagtttgaaggagctcttgggaaagggaaaggcaggagactatatgctttcaaagtcatg
atgactaaaaaactcatcaaatttaatcgtgattttgagaacttcaaaacggcctgtata
ccctgggagaggaagataaaggaagtagaaagtcattttggatcatccgtagcatcatat
ttcctttttttgaggtggatgtatggtgtaaacctggtcctttttgggttcatgtttggc
ctggtggtgctccctgaggttcttatgggtcttccttatggctccattcccaggaaaact
gtccccagagaggaacaggatacagcgatggacttctctgtccttctcgactttgggggt
tactgccaatactctattctgttctatggattctacaacaatgatcgaacaatcgggctg
ctgaagttcagactccctctgtcttacctccttacgagtgtcggtatattcggatacagc
ttgttggttgtcatcagaacgatggctcgcaacgccaacgaaggaggagacgggggagaa
gagggggacttcatctttagctggaagatgtttaccagctgggactatctgataggaaac
ccagagactgcagacaacaagtatgcatccataaccaccagcttcaaggaatcgattgta
gatgaacaggagaaccaaaaagatgagaatatccaccttcggcgtttcctcagggttttt
gcaaattttctgatcctgtgcagcctcggtggcagcggatatctcatctactttgtggtg
aaacgttctcaagactttgctaaggtggaccccaaaacccttacgtggtttgaaaaaaat
gaggtggagtttgtgatgtcactgctggggcttgtttgtcctcctctctttgaaaccatc
gcagagttggaagactatcatcctcgtattgcccttaaatggcaactgggacgcatcttt
gcccttttccttggaaatctttacacgtttctctttgcactctttgatgaggttacagcc
aagctggaaactgaaaaatcaatcaagaatgccactgaatgggcttatcagcaatacttc
gccaactacagcttgttctacaacaccacagatgtgccacctccaaatgtggcccctgca
gatgtcatcaggggtccctgctgggagactggagttggacgagaatttgtgaagcttact
gtttcagatgtgcaggttacctatttgactatccttgttggtgactttgcacgtgccgtc
attgtccgcttcctcaactattgctggtgctgggacctggaagctggatttccttcatat
ggagaatttgacatcagtggaaatgtcctaggtcttgtcttcaatcaaggaatgatatgg
atgggagcattttatgctcctggtctagtgggcatcaatgtcctgcggctcttgacctcc
atgtattatcagtcctgggcagtgatggcctgcaatgttcctcatgagcgagtgtttaaa
gcctcacgctccaataacttctacatgggcttgctgctgctggtgctgtttcttagcctg
cttcctgttgtatactcaatgatgacattggccccatccttcgactgcggaccattcagt
ggtcaagagaagatgtatgatgtggtaatagagactattgagcaggatctaccagctttt
attgggaacatctttacatatgccagcaaccctgggctcattatgcctgctatcctcctt
atgatattggccatctactatttgaacacagtgtcaaaagcataccaacaaacaaatatt
gacctgaggaagaagatgaaaatggctcgagaagatgagaagaataggaggaacaacaag
gacagcactaatcaagtaatgaaagacttggaagacctgctgccaaataaatctctagcg
ccgcctccagctgaggaggagaaagtttctgaggttgtagttgacaagcacagcaaatca
actaagacaaagcctggcacagcaggaaaaggagtgaatgtacaaaaggaggtatcgctg
gctgcccccaaccctaaggggccagtcacccgggcccctgggccaagaggagggcttcct
ggaaacatgaggtcgcctcaaccaggccctggaagaggcagaggtcagactgcagctcca
agaagatga
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