Cyprinodon variegatus (sheepshead minnow): 107092780
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Entry
107092780 CDS
T06110
Name
(RefSeq) paired box protein Pax-6-like
KO
K08031
paired box protein 6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107092780
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
107092780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
HTH_23
Homeobox_KN
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
107092780
NCBI-ProteinID:
XP_015242919
LinkDB
All DBs
Position
Unknown
AA seq
384 aa
AA seq
DB search
MPQKDYRSQPSWETGVASMMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD
ISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVGKIAQYKRECPSIFAWE
IRDRLLAEGVCTNDNIPSVSSINRVLRNLATDKNQMGSGASEGMFDKLKMLNVQGSWGGR
SGWYAGTTVLNTVLEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAKWRREEKLRN
QRRQVLNTSNHIPINSSFSSSAYSSPPQPSAPVSFSSGSIMGRSDQVLSNSYGLPAMPSF
SMAASLPIQASNHTSYSCMLPSSPSVNGRSYQTYTPPHMQPHISSQPVTSSTTSSTGLIS
PGISVPVQVPGSEAEMSQYWPRLQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaaagattacagaagtcaacccagctgggagactggtgtcgcctccatgatg
caaaacagtcacagtggagtaaaccagcttggaggcgtgtttgtaaatggaagacctctc
ccagattctaccaggcagaagatagtggagctcgctcacagcggcgctcggccgtgcgac
atatccagaatacttcaggtgtcaaacggctgcgtgagtaagatcttgggtcggtattat
gagaccggctcgatccgtccgcgggccataggagggagcaaacccagggtggcgactcca
gaagtggtggggaagattgctcagtacaagagagagtgtccatccatttttgcttgggag
attagagaccgactgctggcagagggagtctgcaccaacgacaatatccccagtgtttcc
tcaataaatcgagtacttaggaacctggcaacggacaagaatcagatgggaagcggggcg
tctgaaggaatgtttgacaaactaaagatgctcaacgtacagggatcctggggaggacgc
tcagggtggtatgcagggaccaccgtcctcaacacggttttagaatttgaaaggactcac
tatccagatgtttttgctcgtgaacgtcttgctaataaaattgatctccctgaagcaaga
atacaggtttggttttcaaacagacgtgcgaagtggagaagagaggagaagttaaggaat
caacgacggcaggttttgaatacctcaaaccatattcccatcaacagcagctttagcagc
agcgcttactcctctccacctcagccttctgctccagtgtccttttcttcgggatccata
atgggaagatcggatcaagttctatccaacagctatggccttccagctatgccaagcttt
agcatggctgctagcttgcccatacaagcatcaaaccatacctcttattcctgcatgctt
cccagcagcccctcggtaaacggtcgaagttatcagacatatactccacctcacatgcag
ccgcacatcagcagccagccggtgacgtcctctacaacatcttcaacaggtctgatttct
cctgggatctcggttccagtccaagttcctggaagtgaagcagaaatgtcacagtactgg
cctcgcctgcagtga
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