Cyprinodon variegatus (sheepshead minnow): 107092786
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Entry
107092786 CDS
T06110
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107092786
03036 Chromosome and associated proteins [BR:
cvg03036
]
107092786
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107092786
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107092786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_REST
zf-C2H2_7th_ZNF462
zf-C2H2_ZN142
zf-met
Zf-C2H2_ZNF451
Roughex
zf-C2H2_6
zf-C2HE
zf-C2H2_15
DTHCT
zf-WIZ
zf-C2H2_ZNF142_18
Motif
Other DBs
NCBI-GeneID:
107092786
NCBI-ProteinID:
XP_015242927
Ensembl:
ENSCVAG00000003265
UniProt:
A0A3Q2CBP7
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MGASGSVPDQRRTSARGLLVTSGATRDMVTSFLGFQVVKVGANGEVETVEQEEGVEPHPE
QDDDEDEDVGQQLPDEGDEPVQAPNSDQSWAKDPDYQPPSGGIKKSKKGKKSRLRYAEGD
KDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSFIETGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDLCDYCCRQERHMVMHRRTHT
GEKPFACSQCEKTFRQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNTMARHAENCN
GEAEELENGAVTPKRGRRGRKRKMRSRRDDDDSEEDAAELDELEDEDEAEDEAAVLQEED
DLEAVELDQAPAVVPLVAPEEPPVKRKRGRPPKNPKPQAASAPGPAASVVATVQVKDELM
GAVENIIVKKEEADGTTPEKQVEGLTEEGGAEEVELAVSEETTAAAANGDLTPEMILSMM
DR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgtctgggtcggttcccgatcagaggaggacctcagctcggggtcttttggtc
acatccggggcgaccagagacatggtcaccagtttccttggttttcaggttgtcaaggtc
ggcgccaacggggaggtggagacggtggagcaggaagagggagtggagccccaccctgag
caggacgatgacgaggatgaagatgttggacagcagctgccggatgaaggagacgagccg
gttcaggcaccaaacagcgaccaaagctgggctaaagacccagactatcagcctccgtct
ggaggcatcaaaaagtccaaaaagggcaagaagagccgactgcgctacgctgagggggac
aaggacatggacgtcagcgtctacgactttgaggaggaacagcaggagggccttctgtct
gaggtcaacgccgagaaagtggtgggcaacatgaagccgcccaagcccacaaagatcaag
aagaaaggagtgaagaagacgttccagtgcgagctgtgcagctacacgtgtccccgccgc
tccaacctggatcgccacatgaagagccacaccgacgagaggccgcacaagtgtcacctg
tgtggacgagcctttaggacggtgactctgctgcgaaatcatctgaacacgcacacagga
actcggccgcacaagtgcaccgactgcgacatggcgtttgtgaccagcggagaactcgtg
cgccaccgccgctacaaacacacacatgagaaaccgttcaagtgctccatgtgcgactac
gccagcgtggaggtgagcaaactgaagcggcacattcgctcccacaccggcgagcggccc
ttccagtgcagcctctgcagctacgccagcagagacacctacaagctgaagagacacatg
aggacgcactcaggagagaagccgtatgaatgctacatctgccacgcccgcttcacccag
agcggaacgatgaagatgcacatcctgcagaaacacacggagaacgtggctaagttccac
tgccctcactgcgacaccgtcatcgcacgcaagagcgacctgggcgtccatctgaggaag
cagcactcgttcattgagaccgggaggaagtgccgatactgtgacgccgttttccacgag
cgctacgctttgatccagcatcagaagtcccacaagaacgagaagcgcttcaagtgtgac
ctgtgcgactactgctgccgtcaggagcgccacatggtgatgcatcgccggacccacacg
ggagagaagccgttcgcctgcagccagtgcgagaagacgttcaggcagaagcagctgctg
gacatgcacttcaaacgctaccacgaccccaactttgtccccaccgccttcgtctgcccc
aagtgtagcaagacgttcacgcgcaggaacaccatggctcggcatgccgagaactgcaac
ggcgaggcggaggagctggagaacggagctgtgaccccgaagagggggaggagagggagg
aagaggaagatgaggagcaggagggatgatgacgacagcgaggaagacgccgctgaactg
gacgagttggaggatgaggacgaggctgaggatgaagctgccgtgctgcaggaggaggac
gacctagaggccgtggaactagatcaggctcctgccgtcgtcccgctggtggcccccgag
gagcccccggtgaagaggaaacgaggccgacccccgaagaaccccaaaccccaggcggcc
agcgcacccgggcccgcggcgtcagtcgtcgccactgttcaggtgaaggacgagctgatg
ggcgccgtggagaacatcatcgtgaagaaggaggaggccgacggcacgactcctgagaag
caggtcgaagggctgaccgaggagggaggggcggaggaggtggagctggctgtgagcgag
gaaacgacggccgctgctgctaacggagacctgaccccagagatgatcctgagcatgatg
gaccggtga
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integrated database retrieval system
