Cyprinodon variegatus (sheepshead minnow): 107092834
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Entry
107092834 CDS
T06110
Name
(RefSeq) retinoic acid-induced protein 1-like
KO
K19749
retinoic acid-induced protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107092834
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107092834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
VitD-bind_III
Motif
Other DBs
NCBI-GeneID:
107092834
NCBI-ProteinID:
XP_015242985
Ensembl:
ENSCVAG00000002603
UniProt:
A0A3Q2DNE8
LinkDB
All DBs
Position
Unknown
AA seq
2205 aa
AA seq
DB search
MQSFRERTSGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGHNRS
GYDGMSNTANVPTGGAAGIGGPKDCYSQQNYSGYPGNTGGSGNGNGGSPASQTKKSFRGS
KAPPPNPGQHLQGPGGYSNHMGPGNYSAQYMSEGHLQQKWDDPAQIAQYEQEMVGRLEAG
ASPAPGSSHYMDSNMLGHSQTPCHQPSTPSYTSPHHHPHPPNPAPSPLMYPQSHLHYPQP
SPSPSPYMEKCSPMPQCFKGYNIPPSSQYSRQLSSHSSLKQGGYRSTQNSYGYQQPTPRG
YEQQTSLQAMTNPQEPHSKYQHYNQSQQNYCLSELPVRSPEQYYQTCSPSSSHSPARSVG
RSPSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSTGMQDQASANTMLMPPRSHPSP
NISHTASHSYTTTPQAPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSEALV
ANKKGNKRSSGGSNGSTGSGVSNKKGEEYKSPPYPESGGSVSGGPMHEPYSTPQHQPLPM
ELHEGGYSSSSDEPLDRGYYYFGQGRSPAQALNNTQLSLDTASSCSIASPDDMSTRSGDS
GLHNLTPDPIRCQAGQGGDGMNTPVKSISDERSPTSITISSPMKLERDSPSHIQHINQPV
KENFEESAWTEKPTEKEEEAVEKTLDFISNTHSTNHSEKQEKWRDDEKCPTFYSKINTDM
AGKNYCYEDEMYQEVQSKYDSDARDSIEQSPANLSDSSNKDNFSQEMKSEAFKSESPTAS
ESSVKTLPFISRGDLEQDQYSTEKDDSSANTSPTPQAEVQEECSSDKESRNQENDKELVE
ERGEDKTNEEEEEVTEKSYLSQVLSGEIRNDVKEGEKEGCSLNEDQTNDGDIQGSSSEDH
YSRTESHNLTLHTDSDFPGGHGHLNAAAATTATDASTRESAIGDTAPQPQSAMPVFSALN
DKAAPPAQTRDHIDHSDAKVLEPDSPQLPGKSILPSAPSWADTPPSPQKGDDDIEPGISC
ASAVTPQAKPEPMFPSAQPRTYGRKHARGRRKAIHSGVALRRQLSLKKQEEKEDEETKNA
QKTSMPPSKTALFSDQTNLALQDSIASQNPKILSDGFQSRMCTRSFNAADMQAKVEPNVR
RKTGPKPGTKPGPKPIAKPGPKPGSKSGLKPGPKPGPKPGKRIGQKLSPNESHIPLKIET
AARQKPGPKPGLKPGAKPGPKPGSKPGPKPALRPGPKPGIKPAEVLTSTDAAPVKAPVGR
PRGSISKAKLMDREDLRQVTEKQSRTRKALKTTTLQDDQDVKPTPEEKRTSTEIKIPEKE
NNNMVLRSRKPSQDKRTKEKEREGEGTQIQITTENKVSEVSLNVEEVVVEKILNPNPDTR
IKTDVSIDEPALPVMTILSEGSKEKSQPILKRKSSPEISTTPVKKKRGPKPKLRNLPHQP
VLFEETLPTPKEKIVPGPRRKRGPTRKASLVTEEASPNSCGSMNSDLPVIPPQCPTKTKV
LPPRKGRGQKYEAMVQKITSPSSKKHLPTTPQDNCLSEDITSKAFSEFVLKEGGTSVQTN
YTDTTDFTKEEMKQQEGGLAIENVSQQSEKHELSLEESTIDILRPLLEDDVTNTNERQQD
TDKGKPETKMDLVDYEALTSVETSIEVAALAERTEQASEIVFTGATKSVRTKRKRWAMVE
STDASVVALEADSLIITTPRLAKQRAIKNNHEMHLKQRRKKRKGEANLEETGTVAETNAK
ETPQPLEKIEEKVAITESTEPLPTSQDKLAETPQAVSTELKQKPRRGRKPSSNPNKRKRS
QALVEQASGKPVKIHKKPGPKPGMKDAIEVIEAVVRAAGCEQDKKEEQEKEERERRGLEN
TEGEVSTIGPVVTVTEKDMEVISVKRIRRRLLNRNSKLSFCPYVRISNSRDFSSWCAIVN
KPEDAVVFQRRRKKGILRMRNPFTVAKAVPHSSAMQLGPLVNTNRADVCLTCCLCGKPPN
YKGLGDLCGPYYTEDSIPRKILTIQHTQLFREDTNKTDGNDSGCSEEPGTSSKTEDTMNS
EKEGNTETSEEAGHSRHHLRHYRRLARRVRSGQEGGLRRLTLRERFRRMKQLQNLCTATS
KEQEDNESTFQRLQMQAVANEHWAHENCTIWTKGIIMVAGRLYGLKEAASKSAQTSCQKC
QISGASLSCCWRGCSYRYHYICAKEIGCTFHEDDFSIKCPKHEDL
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgtgagcgcaccagtggttaccacagcaaccagccctgctatcagcag
gagccccatgaattatctcgcctggagacctacagacaacacccacatcatccccatccg
cagcatccacaccccggccctggtccacatcccggccctggcccagggcacaacaggtca
ggctatgatggtatgtctaacacagcaaacgtgccaacaggtggagcagctggaattgga
ggacccaaggactgttacagccaacaaaactattctgggtacccaggaaatactgggggc
agtggaaatggaaatgggggttcaccggcctcacaaacaaaaaaatcctttagaggaagc
aaagctccccctccaaaccctggtcagcacctgcaggggcccgggggctatagtaatcac
atgggcccaggaaattattctgcccagtatatgagtgagggccatctccagcagaagtgg
gacgaccctgcacagatagcacagtatgaacaggagatggtgggtcgacttgaagctggt
gcttcccctgcccctggctcctcccactatatggactcaaacatgttggggcactcccaa
accccgtgccaccagccctctaccccaagttatacaagtccacaccaccatccccaccct
cctaaccctgccccctcacctctcatgtacccccagagtcacctgcactaccctcaaccc
tctccctctccatccccatacatggaaaaatgcagtcctatgccccagtgttttaaaggc
tacaacatacctccaagttctcagtatagcagacagcttagtagtcatagcagtctaaag
caggggggctacaggtcaacacagaatagctatgggtaccagcagccaacacccagaggt
tatgagcaacagacttctttacaggcaatgaccaacccccaagaaccacactctaaatac
caacactacaaccaatctcagcaaaattattgtctttcggagctgcctgtcagatctcca
gaacagtactatcagacttgtagcccctcctcaagccattcgcctgctcgatctgttggg
cgctcaccttcgtatagttccaccccttcaccactaatgaccaatccagagtctttccag
tatggacagcccccaatgacacctggagcagcctcctcctcatcatcttcttcaactggt
atgcaagatcaagccagtgcaaacaccatgctgatgcccccaaggtctcacccttcgccc
aacatatcccacacagcatcccacagctatactactacaccacaagcacctacaatgaaa
gagcgcttctcagaaaagctgttatcaaatcccagcttgtggagcctgaacgctctcacc
tcccaggtggagaatatctccaataatgtccagcaacttctgctttcagaagcgctggtt
gcaaacaagaaaggcaataaacgcagcagtggtgggagcaatggcagcactggaagtggg
gtatctaataagaagggtgaagaatacaaaagtcctccatatccagaaagtggtggtagt
gtgagtggtggcccaatgcatgaaccttactctaccccacaacaccagccattgcctatg
gaactccatgaaggcggttattccagcagtagtgatgaaccgttggacagaggctactat
tactttggccagggcagaagtccagcccaagcccttaacaatacgcaactaagtctggac
acagcctcatcttgctcaattgcttctccagatgatatgtccaccagatctggagattca
ggtctgcacaaccttactcctgatcctataaggtgtcaggcagggcaaggaggagatggc
atgaatacccctgtgaaaagtatcagtgatgagaggtctccaacaagcatcacaatctcc
agccctatgaaactagaaagggattccccatcacatatacagcatatcaatcaacctgta
aaagagaactttgaagaatcagcttggacagaaaaacctactgaaaaggaagaggaagcc
gtagaaaaaactcttgacttcataagtaatacacactcaactaaccactcagagaagcaa
gagaaatggagagatgatgaaaaatgcccaacattctacagcaaaataaacacagatatg
gcaggaaaaaactattgctatgaggatgaaatgtaccaagaggttcagagcaaatatgat
tcagacgcaagagactctattgaacaatccccagctaatctctctgattccagtaacaag
gataattttagtcaagagatgaagtcagaggcattcaaatctgaatctccaaccgcatct
gagagctctgtgaaaactttgcctttcatttcaagaggggaccttgaacaagatcaatat
tccacagagaaagacgacagttcagcaaacacctctccaaccccccaagctgaagtccag
gaagagtgcagtagtgacaaggagagcagaaatcaagagaatgacaaagagttagttgag
gaaaggggagaagataagacaaatgaagaagaggaagaagttactgagaaaagttatctt
tcacaggttttatctggagaaattaggaatgatgttaaagaaggagaaaaagaaggctgt
tcacttaatgaagatcaaacaaatgatggagacatccaagggagttcctctgaagatcac
tacagcagaacagaaagtcacaatttaacactccatactgacagtgattttcccgggggg
catggccatctaaatgctgcagcagcaacaacagcgacagatgcttcaacaagggaatca
gccattggtgacacagcacctcagccacagtctgctatgccagtattctctgctctcaat
gacaaggcagctcctcctgctcaaactagagatcatattgatcacagtgatgctaaggtt
ctggagccagactctcctcagctgccagggaagtcaatactaccctctgctccttcctgg
gctgacactccaccatctcctcaaaaaggtgatgatgatatagaaccaggcataagttgt
gccagtgctgtgacaccacaggcaaaaccagagcctatgtttccatctgctcagccaagg
acttatggtcgcaagcacgctagaggacgaaggaaagcaatacattccggtgtggcatta
aggcgacaactaagcttaaagaagcaggaagaaaaggaggatgaagaaacaaagaacgca
caaaaaacaagcatgcctccaagcaagactgctttattctccgatcaaactaatcttgct
cttcaggattctattgcgagccagaatcctaagatactgtcagatggttttcaatcgagg
atgtgcactcgctcatttaatgctgcagatatgcaagcaaaagtcgaacctaatgtaagg
cgaaaaacaggtcccaaacctggaactaagccaggcccaaaaccaattgcaaagccaggg
ccaaaaccaggttctaaatctggtcttaaaccaggtccaaaacctggaccgaaacctggg
aaaaggataggacaaaaactttcacctaatgaatcacacatccccttaaaaattgaaaca
gcagcgagacaaaaaccagggcctaaaccaggtttaaagcccggagcaaaaccaggacca
aagcctggatctaaacctggaccaaaaccagccctaagaccgggtccaaaacctgggatt
aagcctgctgaggttttgacctccactgatgctgcacccgtcaaagctccagttggtcgc
cccaggggctcaatttcaaaagctaaattgatggaccgggaagatttaagacaagtcaca
gaaaagcaaagcaggactagaaaagctctaaaaactacaacactccaagacgaccaggat
gtaaaacctacaccagaagaaaaacgaacttccacagaaattaagataccagaaaaggaa
aataacaatatggtgttaagatctagaaagccatcacaagacaaacgaacaaaagaaaaa
gagcgggaaggggaaggcactcaaatccaaataacaacagaaaataaagtcagtgaagtt
tctttaaatgtagaggaagtcgtagtggaaaaaattctaaatccaaacccagataccagg
ataaaaactgatgtttcgattgatgaacctgctctacctgtaatgacaattctatctgag
gggtctaaggaaaaatcacaacctatactgaagcggaaatctagcccagaaatctctaca
acacccgtgaaaaagaagagaggtccaaagcccaagctaagaaatttgccacatcagcca
gttttgtttgaggagactctacccactcccaaagagaagattgtccctggtcccagaaga
aagagaggaccaacaaggaaagcttctctggtcacagaggaagcttccccaaatagctgt
ggatctatgaacagtgatcttcctgtgattcctcctcaatgccccactaaaacaaaagtt
cttccgccacgcaaaggcaggggacagaaatatgaggcaatggtacagaagatcacatct
cctagctcaaagaaacacctccccactaccccacaagacaattgtctaagtgaggatatc
acttcaaaagctttttctgaatttgtccttaaggaaggtgggacctctgttcaaacaaat
tacactgacacaacagatttcacaaaagaggaaatgaaacagcaagaaggaggtcttgca
atagaaaatgtatcacaacaaagtgaaaagcatgaactaagtctagaggaatcaacaata
gatatattgagaccgttattggaagatgatgttacaaatacgaatgaaagacaacaggac
acagacaaaggtaaaccagaaaccaagatggatcttgttgactatgaggctttgacttca
gtagagacatcaatagaagttgcagctttggcggagaggacagaacaggcctctgagatt
gtttttactggtgccacaaagtctgtcagaactaagagaaagagatgggcaatggtggag
agtacagatgcatcagtagtagccttggaagcagacagtctcataatcacaacaccaagg
cttgcaaagcagagagccattaaaaacaaccatgaaatgcaccttaaacagaggaggaag
aagagaaagggggaggcaaatttagaggaaactgggacagtagctgagacaaatgcaaaa
gaaacaccacaacctctggaaaagatagaggagaaggtggccatcacagagtccacagaa
cctctaccaactagccaggataagttagcagaaacccctcaagctgtctctacagaactt
aaacaaaaacctcgaagaggccgaaaaccatcatcaaacccaaacaaacggaagagaagc
caagccttagtcgagcaagcttctgggaagccagtgaagatccacaaaaaacctgggcca
aaacctgggatgaaagatgcaattgaggtcattgaggcagttgtaagggcagctgggtgt
gaacaggacaaaaaagaggaacaagaaaaagaagaaagggaaagaaggggactagagaac
acagaaggagaggttagtaccattggtcctgtagtgaccgttacagaaaaagacatggag
gtcatctctgtgaaaagaatcaggaggagactactcaacagaaattccaaactgtctttt
tgtccttatgtaaggatcagcaattcaagagacttttcctcttggtgtgcaatagttaac
aagcctgaagatgccgttgtttttcagagacgcagaaaaaagggcatacttagaatgagg
aatcctttcacggttgctaaagcagtgccgcactcctctgccatgcaacttggaccattg
gtaaacacaaatcgagctgatgtatgtcttacctgttgcttgtgtgggaaaccaccaaac
tacaaaggcctgggtgatctgtgtggtccctactacacagaagatagtattccacggaaa
attctgaccatccaacacacgcaactcttcagggaagacaccaacaagacagatgggaat
gatagtggttgcagcgaagaaccaggtacctcctcaaagactgaagatacaatgaattct
gaaaaggagggaaatacagaaacttctgaagaggctggccacagcaggcaccatctccga
cattaccggcggctagcaaggcgggtaagatcaggtcaggagggtggtctgagaagactt
acgcttagagagagattcagaagaatgaagcagcttcagaacctctgcacagccacttca
aaagagcaagaggacaatgaaagcacgttccaaaggctacaaatgcaagcagtagcaaat
gagcattgggcacatgaaaactgtaccatctggaccaaggggataattatggtagctgga
aggttatatggattgaaggaagctgccagcaagtcagctcaaacgagctgtcaaaagtgc
cagatttcaggagcatccctcagctgctgttggagaggctgctcttataggtatcactac
atctgcgccaaggagataggctgcacattccatgaggatgatttttccatcaaatgccca
aaacatgaggacctgtaa
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integrated database retrieval system
