Cyprinodon variegatus (sheepshead minnow): 107092840
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Entry
107092840 CDS
T06110
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107092840 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107092840 (tbl3)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
107092840 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_RIG_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_HPS5
Cytochrom_D1
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
107092840
NCBI-ProteinID:
XP_015242994
Ensembl:
ENSCVAG00000002720
UniProt:
A0A3Q2CA87
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MANSNLQFKTNFAVSSKIEPFYKGGKVQISKDEKYVFCTCGSRVNVLEISTGKIIHSLEH
DDQEDITSFSLSCDDELLVTASKALLLKQWDWKQAKCTRSWKAIHTIPVASMTFDSTSTL
LATGGCDATIKVWDVVKQYCTHNLKGSSGVVHLVQFHPDISRLQLFSSSLDCSIRLWDLR
SSQCICVLQSHYSAVTSLSFSRDGDTMVSSGRDKICTVWDLKSQQAKRTVPVYEAVEGVV
LLPEKTDLSEIGVKSKNELFVTAGSKGVLRVWEANTARCVYTQTLPSTLTPSSEDEDDDN
PRGLMYLFHLPASSRLATVTAEHNILFYQFPSLTTQQQFVGYNDEVLDVKFLGKDDSHIV
VATNSCQLKVFQLLTNSCQILYGHTDTVLTLDVFKKGSLFASCAKDRSVRVWQMDSDSGQ
VRCVAQGSSHTNAVGSISCSRMKASFIVTGSQDCTVKVWDLPAAFPGKEIHQLVPRTTEK
AHDKDVNSVAVSPNDKLLASGSQDRTAKLWSLSGDGQLGLLGVFRGHRRGIWSVCFSPVD
QVLATSSADGTIKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLSSGADGLVKLWTIK
TNECVKTLDAHQDKVWGLHGSRKDDRMVTGSADSNITVWMDVSEVELAEEQAKQEDQILK
HQELSNLLHEKKYLKALGLAISLDQPHTVLTVVKAIRQTEDSSELLEKTLLKLRVDQKES
LLRYCVVWNTNARNCLDAQAVLQVLLKHLPPEELLQYQGARTHLEGLIPYTERHMERIGR
LLQASMFLNYMWQKMRVVGSSSGMEQDEEMDTTPLTQTKPLFFIDKEKEDDSRNERGDQC
DDGDSGQEEEPYSWIKNENEPFEVSASMKASSKNRRKANGKRSQESESEESSEEEEMEDH
HAVQPIKHVRISPPPQCLTSS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcaaaccttcaatttaaaacaaattttgctgtttccagtaaaatcgagccg
ttttacaaaggaggaaaggtgcagatcagcaaagatgagaagtacgtgttctgcacgtgt
ggatctcgtgtcaatgttttggaaataagcacaggaaagatcatccactctttggaacat
gatgatcaagaggatatcacctcattttctctaagctgtgatgatgagctgctggtgaca
gccagcaaagctttgttattgaagcagtgggactggaagcaggctaaatgcacccgctcg
tggaaggccatccataccatccctgtggctagcatgacctttgactccacctccaccctg
cttgccacaggtggttgtgatgccacaataaaagtttgggatgtggtgaagcagtactgc
acacacaaccttaaaggatcatctggcgttgtacacttggtccagtttcaccctgacatc
agccgactgcagctgttctcctcgtccctggactgtagcattcggctgtgggacctgcgc
tccagccagtgtatttgcgtcctgcagagccactacagcgccgtcacctctctaagcttc
agcagagacggtgacaccatggtcagttctgggagggataaaatctgcaccgtttgggac
ctcaaatcccaacaggctaaaagaactgttcctgtttatgaggctgtagagggggtcgtg
ctgctgcctgagaagacagatttatctgagattggagtaaaaagcaaaaacgagcttttc
gttacagctggcagcaaaggtgtgctaagagtgtgggaggccaacactgctcgctgtgtt
tatacccagacccttccctcgaccctcactccttcctctgaggatgaggacgacgacaac
cctcggggtttgatgtaccttttccacttgccggcctcctccagactggctacagtcaca
gcagagcacaacatcctcttctatcagtttcccagtctcaccacacagcagcagtttgtg
ggttacaatgacgaggtgctggatgtgaagttcctgggtaaagatgacagtcacattgtg
gtggccaccaacagctgtcagctgaaggttttccagctgctcaccaacagctgccagatc
ctctacggacacacagatactgtcctcactctggatgtgttcaaaaaaggttctctgttt
gcaagctgtgcaaaggaccgatcggtgcgcgtctggcaaatggacagtgacagtggtcag
gtccgatgtgtagctcagggatccagccataccaatgctgttggctccatcagctgctcc
aggatgaaggcttccttcattgtgacgggcagtcaggactgcactgtgaaggtgtgggac
ctgcctgcagcttttcctggaaaagaaatccatcagctggtcccccgtaccacagagaaa
gcacacgataaggatgtaaacagtgttgcagtgtctcctaacgacaaactgctagcctct
ggctcccaggaccgcacagccaaactctggtccctatcaggagatggacagctggggctc
ctgggggtgtttcggggccaccgtcgggggatttggagcgtctgtttctctcctgtggac
caggtcctggctacctcctctgcagacggcacaatcaaactatggagtctgcaggacttc
agctgcctgaagacgtttgaaggccacgatgcatcggttctgaaagtgatcttcgtgagc
cgcggcacccagctgctcagcagcggagcagatggtttagtgaagctgtggactataaag
accaatgagtgcgtgaagacgttggacgcccaccaggacaaagtgtggggtctccatggc
agccgtaaggacgacaggatggtcacaggctcggcagactcaaacattacagtttggatg
gatgtgagtgaagtggagctggcagaggaacaggccaaacaagaggatcagatactcaag
caccaggagttgtccaacctgctgcatgagaagaaatacctgaaggccctaggcctcgcc
atctcactagaccagccgcacacagtgctaactgttgtcaaagcaattcgtcagacagag
gacagcagtgagctgctggaaaagacactcctgaaactacgggtggatcaaaaagagtcg
ctgctgcgctactgcgttgtgtggaacaccaatgccaggaactgtctggatgcccaggct
gtcctccaggttctgttgaagcacctgccccccgaggagctgctgcaataccaaggggcc
cgaacacacctggagggtctcatcccatacacagagagacacatggagaggatcggccgt
ctgctgcaggcgtccatgtttctcaactacatgtggcagaaaatgagagtcgttggatca
tcatctggtatggagcaggatgaagagatggacaccactcctctcacacagacgaagccc
ttatttttcattgacaaagaaaaagaagacgacagccgtaatgagaggggagaccaatgt
gatgacggtgacagcgggcaagaagaggagccgtattcttggatcaaaaatgaaaatgag
ccctttgaagtcagcgcctcgatgaaagcctcctctaaaaacagacggaaggcaaacgga
aagcgcagccaagagtcagagagcgaggagagctcagaggaggaagaaatggaggaccac
catgcagtgcagccgataaaacatgtccggatttcgccgcctccacaatgtctgacttca
agctga
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integrated database retrieval system
