Cyprinodon variegatus (sheepshead minnow): 107092869
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Entry
107092869 CDS
T06110
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107092869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107092869
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107092869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
DUF7182
Motif
Other DBs
NCBI-GeneID:
107092869
NCBI-ProteinID:
XP_015243041
Ensembl:
ENSCVAG00000002275
UniProt:
A0A3Q2C9A0
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MASEDIAQLADALSKTHVGDGELSFKGLGLKLDDAESVRELVSQIERYPGLRALRLEGNT
VGVDAARAIAKALESKDQLQRCYWSDMFTGRLRSEIPTALMSLSGALMSAGARLTELDLS
DNAFGPDGVRGIEQLLKSPSCHMLRELRLNNCGMGTGGGKILAEALIESHKKSAALGSPL
RLKVFIAGRNRLENDGATALAKAFQLMGSLEEIHMPQNGINYAGVTALASAIRHNPELQV
LNFNDNTFTKRGTLAMAQALRHLRNVQVINFGDCLVRSEGAIALAAVLREGLPILKELNL
SFGEITEGAALIVAQAVMDKPHMEKVNLNGNCLGEDGCEVLREMMDNMDKGDMLASLSED
EGEPDDEEDEDSDEGDSDASDECYETNVCDEIVKENGTTDEGSPEKPESQAEILAFLSSP
SAEDLCRMKMNLQQQVNASEPNKAADIFLKLGSLYSEDTETQFAVFEMIDEVLKKILSAS
ALQSTCFLTTLMVLMGVLKGEGKAKKVPLVPGQLLCLEHAVQQEYFTQEHASLLYTMLSR
NCDALKSFSSAKERLSSALEKKKPNHH
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagaggacatcgctcagctggctgatgctctctccaagacacacgtcggtgat
ggagagctgagctttaaaggtctgggactgaagctcgacgacgcggaatcagtgcgggag
ctggtcagccagatcgagcggtacccgggtctgagagctctgcggctggaaggaaacacc
gtgggagtggacgctgctagagccatagctaaagctctggagagcaaagaccagctgcag
agatgctactggagtgatatgttcacaggaaggctgcgctctgaaatccccactgctctg
atgtccttgagtggtgcgttaatgagcgctggtgccaggctgactgagctggacctcagt
gataacgcctttgggcctgatggcgtcagaggaattgagcagctcctgaagagtccgtcc
tgccacatgctgagggaactgagactcaacaactgcggcatgggaacaggaggaggaaag
atcctggctgaggctctaatcgagagccacaaaaagtcagcagcccttggatcccccctg
agactgaaagtgttcattgcagggagaaaccggctggaaaatgatggagccactgccctg
gctaaggccttccagcttatgggcagcctggaggagatccacatgcctcagaatggcatc
aactatgccggggtgacggccttagcttcagccatccgtcacaacccagagcttcaggtt
ctaaactttaatgacaacaccttcaccaagaggggaaccctggccatggcgcaggcgctg
aggcaccttagaaacgtccaggtgatcaactttggcgactgtctggttcgctcagaagga
gccatcgccctcgctgcggttttgagagaaggtcttcccatcctaaaggagctcaacttg
tcgtttggagagatcacagagggagccgctctcatcgtcgctcaggccgtcatggataaa
ccccacatggagaaagtgaatctgaacggcaactgtttgggtgaggacggctgtgaggtc
ttgcgagaaatgatggacaatatggacaaaggagacatgctggcttccctcagtgaggat
gagggggaaccagacgacgaggaagatgaagacagcgatgaaggcgatagcgatgccagc
gatgaatgttatgagaccaacgtgtgtgacgagattgttaaagaaaacggaacaacagac
gaaggaagccccgaaaaacctgagagccaagcagaaatcctggctttcctcagcagcccc
tcagcagaagatttgtgccgtatgaagatgaaccttcagcagcaggtgaatgcatctgaa
ccaaataaggcagcagacatttttttgaagcttggctccctgtacagcgaggacacagaa
acccagtttgctgtgtttgaaatgatcgatgaagttttgaagaagatcctctctgcttcg
gctctccagtcaacctgcttcctcaccaccctgatggtcctgatgggagtcctgaaggga
gaaggcaaagcaaagaaggtgccgctagtcccaggtcagctgttatgtttggaacatgct
gtccagcaggaatatttcactcaggaacacgcctctctgctttacaccatgctgtccaga
aactgtgacgctctgaagtctttcagcagcgccaaagagagactgagctctgctctggag
aagaaaaagcccaaccaccactaa
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