Cyprinodon variegatus (sheepshead minnow): 107092873
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Entry
107092873 CDS
T06110
Name
(RefSeq) LOW QUALITY PROTEIN: UPF0505 protein C16orf62 homolog
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107092873
Membrane trafficking [BR:
cvg04131
]
Protein recycling
Others
Retriever complex
107092873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
107092873
NCBI-ProteinID:
XP_015243047
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Position
Unknown
AA seq
952 aa
AA seq
DB search
MAAVQWRSRGRNYEAELQRCHPEGIPVEFGDYHPLKPIMVTDTKSRRGTRKGSTSSSSSS
SSSAPADPLSSMLDGTDPLSMFAAASSSETSALSRSSSTGDLGRKKRVKEEEALGADFES
WSSKRGDILARFTTTEKLSISLSMGTDRGKAPNPGSSAVSEKVRTRLEELDDLEEGSQRE
LLNLSQQDYANRIEELNQSLKEAWSSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLIT
DILDTFGRLVYDRIWTMCSDPRPLPDSFTAEDVNDTAKETCLNWFFKIASIRELLPRLYV
EAAILKCNRFLSRSGIQETLPRLTAMIRGIGDPLVAAYARAYLCRVGMEVAPHLKESLNA
NFFDLLATFRQISGDSVQRQLHVQRVEVPMYLTLYSPAISWILQCIAYRAPEQLLTEMME
RCKMMANNALLLNSIMRAFRPEFVATRATDFIGMIKDCDESGFPKHLLYGSLGRSLGCAD
PPESERLTILNEAWKVITKVRNAEDYMNCAEIWVEFTCRHFTKREVNTVLADIIKHMTPD
RAFEDAYPQLQSVIRKILTYFHDFSMLFSMERFLPFLDMFQKDSVRVEVCKSIMEVFIKH
QLEVTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLAVLITGFIRMVRLLSFWIKWIYV
SRNLGWNKGVNNGGSAASYLLFYLNEIRPDLACAAYCFITIPXSNIFSRLHLYLLSGQVA
LANQCLSQADAFLKAAVSILPEVPRSISVEGKLRSSESFLLDFINNFLATLLVVPDHPEH
GVLYLVRGLLNMVQDYTWEDGSDAKVRVYISALPLLAAMSQETYLYSIAKVDSNETLYGG
DPKFLSEINKLCETLIGQILDHLKGLSKDEQSTRRQSALAFSLFGVLVAHGDLRNNKLSQ
LSINLWNLSHKHGHCDTRIAVRTLESIKHQAQLPAMAHLSDTVQRLALQSRT
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtgcagtggcgttcccgtgggcgtaactatgaggcagagctgcagaggtgt
catcctgaggggatccctgtggagttcggggactaccaccccctcaaacctatcatggtc
acagatacaaagagccggcggggaacccgtaaaggcagcacttcctcctcatcttcctcc
tcctcttcagcacctgcagaccccctcagctccatgctggacggcacagaccccctgtcc
atgttcgccgctgcctcttccagcgagacgtcggccttgtcacgtagcagctccactggg
gatctcgggaggaagaagagagttaaggaggaggaggcgcttggagcagattttgagtcc
tggtcatcaaagcgaggagacatcctggccaggttcaccaccaccgaaaaactctccatt
agtctctctatgggcactgacagaggaaaagctcccaacccgggatcatcggccgtttca
gagaaagttcgcactcgcttggaggagctggacgatttggaggagggttcccagagggag
ctgctgaacctctctcagcaggattatgccaaccgcatcgaggagctcaaccagtccctg
aaggaggcctggtcctctgaccagaaggtcaaagccctgaagatcgtcatccagtgctcc
aagctgctgtcagacacgtctgtgatccagttctaccccagcaagtttgtcctcatcacc
gacatcctcgacacttttggtcgtctggtttatgacagaatctggaccatgtgctctgac
ccccgacctttgccagactcgttcacagctgaggatgtgaacgacacggccaaagagacg
tgcctgaactggttcttcaagatcgcctccatcagagagctgctgcccagactatacgtt
gaagctgcaattctcaagtgcaaccgtttcctcagcagatcaggaatccaggagacgctg
cctcggttgaccgccatgatccgtgggatcggcgaccctcttgttgctgcttacgccaga
gcttacctctgcagggtgggcatggaggtggcgccccacctgaaggagagcctgaacgca
aacttcttcgacctgctggccaccttccggcagatcagcggagacagcgtccagaggcag
ctgcatgtccagagggtggaggtaccgatgtacctgacgctctactcacccgccatcagc
tggatcctgcagtgtatcgcatacagagctccagagcaacttctcacagagatgatggag
agatgtaagatgatggccaataatgctttgctcctgaactcgataatgagagccttcaga
ccggagtttgttgcgaccagagccacagatttcatcggaatgatcaaagactgcgacgag
tccggcttcccgaagcatctgctgtacgggtctctgggccgcagtctgggctgcgccgac
cctccagagtccgagaggctgacgattctgaacgaagcctggaaggtcatcaccaaagtc
cgaaacgctgaggattacatgaactgtgcagagatctgggtggagttcacctgcagacac
tttactaaacgtgaggtcaacacggtcctggctgacatcatcaaacacatgacccccgac
cgcgccttcgaggacgcctaccctcagcttcagtccgtcatcaggaagatcctcacctac
ttccacgacttctccatgctcttctccatggagcgcttcctgccgttcctggacatgttc
cagaaggacagtgtgagggtggaggtctgcaaatccatcatggaggtcttcatcaaacac
cagctggaggtcaccagggacccggtcatcctcaacgccatgctgcacatctgcaaaacc
atgcatgactccgtcaatgctctgactctggaggacgagaaacgatctttggccgtgctg
atcaccggctttatccgcatggtgagacttctcagcttttggataaagtggatttatgtc
tctagaaaccttggatggaacaaaggtgttaataatggaggcagcgctgcttcatatttg
cttttttatttgaatgaaatcaggcctgaccttgcgtgtgcagcctattgtttcatcacc
atccctnntagcaacatcttcagccgcctccacctctacctactgtctggtcaggtggcg
ctggccaaccagtgtctctctcaggcggacgccttcctgaaggcggcagtcagcatcctg
cctgaggttccgcgctccatcagcgtggaggggaagcttcgctcctctgagagcttcctg
ctggacttcatcaacaacttcctggccaccctgctggttgtcccggaccacccggagcac
ggcgtgctgtacctggtccgggggctgctcaacatggtccaggactacacctgggaggac
ggcagcgacgccaaggtgcgggtttacatcagcgccctgccgctgctcgctgctatgagt
caggagacgtatctctactccatcgctaaagtggactccaatgagacgctgtatggagga
gacccaaagttcctctcggagatcaacaagctgtgtgagacgctcatcggccagattttg
gaccatctgaagggactttctaaggacgagcagagcacgcggcgtcaaagcgccctggct
ttctccctcttcggcgtccttgtcgcccacggcgacctgaggaacaacaagctgagccag
ctgtccatcaacctgtggaacctgagccacaaacacggacactgcgacactcggattgct
gttcggactctggagtccatcaaacatcaggctcagctgcccgccatggcccacctgtca
gacaccgtccaaaggctcgccctgcagtcccgcacctga
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