Cyprinodon variegatus (sheepshead minnow): 107092889
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Entry
107092889 CDS
T06110
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04060
Cytokine-cytokine receptor interaction
cvg04217
Necroptosis
cvg04620
Toll-like receptor signaling pathway
cvg04621
NOD-like receptor signaling pathway
cvg04622
RIG-I-like receptor signaling pathway
cvg04623
Cytosolic DNA-sensing pathway
cvg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
107092889
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
107092889
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107092889
04621 NOD-like receptor signaling pathway
107092889
04622 RIG-I-like receptor signaling pathway
107092889
04623 Cytosolic DNA-sensing pathway
107092889
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107092889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cvg04052
]
107092889
Cytokines and neuropeptides [BR:
cvg04052
]
Cytokines
Interferons
107092889
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
107092889
NCBI-ProteinID:
XP_015243078
Ensembl:
ENSCVAG00000007723
LinkDB
All DBs
Position
Unknown
AA seq
182 aa
AA seq
DB search
MSSRIFFACVFLSLCCASSPLSCRWMDHKFRQYSQSSLNLLDMLTYPYTNQDAQANIWPF
PHHLYTQASRTSAEGKLAFTVQILREVSALIVENDSSSSWGEITVEYFLNVVNKQADELQ
SCVSTLGEWRPNRRLHTYFKRLSHGIFRQMGHSTEAWELIRREIKVHLFRVDHLVSSLFT
AN
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaggattttcttcgcttgtgtctttctctctttgtgttgcgcatcctccccg
ctgagctgcaggtggatggaccataagttccgacagtacagccaaagctctttaaatttg
ctggatatgctgacttacccttacaccaaccaggatgctcaggcgaacatttggcctttc
cctcatcacctgtacacccaggcctctagaacatctgctgagggtaaacttgccttcaca
gttcagatcctgagggaggtgtccgccctaattgtggaaaacgacagctcttcatcatgg
ggggagatcacagtggagtattttctcaatgttgtcaacaaacaggctgatgaactccaa
tcttgtgtaagtacacttggagaatggagaccaaacaggcggctgcacacatactttaag
aggctctcacatggcatatttagacaaatgggccacagcactgaagcctgggagctgatc
aggagagaaatcaaagtccacctattcagagtggaccacttggtttcctctctgttcacc
gctaactga
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