KEGG   Cyprinodon variegatus (sheepshead minnow): 107092890
Entry
107092890         CDS       T06110                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107092890 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvg03041]
    107092890 (bcas2)
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107092890 (bcas2)
Spliceosome [BR:cvg03041]
 Complex B
  Other components
   Prp19 complex
    107092890 (bcas2)
 Complex C
   Prp19-CDC5 complex
    107092890 (bcas2)
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    107092890 (bcas2)
SSDB
Motif
Pfam: BCAS2 Sterile RRP36 BRISC_FAM175B_helical Beta-prop_NUP159_NUP214 THOC7
Other DBs
NCBI-GeneID: 107092890
NCBI-ProteinID: XP_015243075
Ensembl: ENSCVAG00000001974
UniProt: A0A3Q2C8G8
LinkDB
Position
Unknown
AA seq 225 aa
MAGTTSVAGEVFVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLPTPDFST
FETEIMRNEFERLAARQPMELLSMKRYELPAPTSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQYGTNAWKVYNSNLAFMIEMAQKELHKFRKQIQDLNWQRKNDQLAAGAKLRE
LESNWVSLVSKNYEIERAIVQLENEVGQLRQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggaacgacttcggtagcaggtgaagtttttgttgatgctttgccgtattttgac
cagggatacgatgctccaggtgtcagagaagcggcggcagcactggttgaagaagagacc
agaaggtaccgaccgacaaagaactacctgagttacctgccaacgccagacttctctact
tttgagacagaaattatgaggaatgaatttgagcggctggcagctcggcagcccatggag
ctcctgagcatgaagaggtatgagctgccggcgcctacatcgggacagaagaacgacatc
acggcgtggcaggagtgtgtgaacaactccatggctcagctggagcaccaggcggtccgc
atcgagaacctggagctcatgtcgcaatacggaacaaacgcatggaaagtctacaacagt
aacttggccttcatgattgagatggctcagaaggagcttcacaagttcagaaagcaaatt
caagatttgaactggcagcggaagaacgaccagttagcagctggagccaaactacgcgag
ctggagtcaaactgggtgtcgctggtcagtaagaactacgagatcgagcgggccatcgtc
cagctggagaatgaagtcggtcagctcagacagcagcagggggacgagaacaaggagaac
atcagacaggacttctag

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