Cyprinodon variegatus (sheepshead minnow): 107092891
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Entry
107092891 CDS
T06110
Name
(RefSeq) bile acid receptor-like
KO
K08538
farnesoid X receptor beta
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107092891
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvg03310
]
107092891
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107092891
Nuclear receptors [BR:
cvg03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
107092891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107092891
NCBI-ProteinID:
XP_015243076
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MLADPLCYPLQDPDPQLLPHNQQQYLPANMPFPFYGSSTSPSPSSLASPSQLCHPPYQYS
SHCVEGPCDPSQESLSGELNQGFGPAGLHLVRRSRMGSVGKSKGQDELCVVCGDKASGYH
YNALTCEGCKGFFRRSVTKKAVYHCKSGGSCEMDMYMRRKCQDCRLRKCRAVGMLAEYML
ADPLCYPLQDPDPQLLPHNQQQYLPANMPFPFYGSSTSPSPSSLASPSQLCHPPYQYSSH
CVEGPCDPSQESLSGELNQGFGPAGLHLVRRSRMGSVGKSKGQDELCVVCGDKASGYHYN
ALTCEGCKGFFRRSVTKKAVYHCKSGGSCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTE
VQCQSKRLRKVGKSRAQEEKESTDSRRVSSTCRLPGQNQPAILTREQKYTVDRMVEAHRQ
FREQDSSSYRVSEWQCALEGAGLPDVLSPHLNRLLQFARTVPGFDLLDFSDQMALLSVSS
LEVMFLLSAQQFSNNPASPTPVLQLFTTSSHGWLRNLEPRENFQMRTSVGSGELLFIVEH
FTPV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagaccctctctgctaccccttgcaggaccccgacccccagctgcttcctcac
aaccagcagcagtacctccctgccaacatgcctttccccttctatggctcctctacctct
ccttcgccttcgtctttggcttcaccctctcagctctgccatcctccataccagtacagc
tctcactgcgtggagggcccctgcgatcccagccaggagtccctctccggggaactgaat
cagggatttggcccggcggggctgcatcttgtacggaggtctcgaatgggttcggttggg
aagagtaaagggcaggatgagctgtgtgtggtgtgtggggataaagcatcagggtatcat
tacaatgctctaacctgtgaagggtgcaaaggtttctttaggcgcagtgtgactaaaaag
gctgtgtaccactgtaagagcggcggcagctgtgagatggacatgtacatgaggaggaag
tgccaggactgccggctgaggaagtgccgcgcggtgggaatgctggctgagtacatgctg
gcagaccctctctgctaccccttgcaggaccccgacccccagctgcttcctcacaaccag
cagcagtacctccctgccaacatgcctttccccttctatggctcctctacctctccttcg
ccttcgtctttggcttcaccctctcagctctgccatcctccataccagtacagctctcac
tgcgtggagggcccctgcgatcccagccaggagtccctctccggggaactgaatcaggga
tttggcccggcggggctgcatcttgtacggaggtctcgaatgggttcggttgggaagagt
aaagggcaggatgagctgtgtgtggtgtgtggggataaagcatcagggtatcattacaat
gctctaacctgtgaagggtgcaaaggtttctttaggcgcagtgtgactaaaaaggctgtg
taccactgtaagagcggcggcagctgtgagatggacatgtacatgaggaggaagtgccag
gactgccggctgaggaagtgccgcgcggtgggaatgctggctgagtgccttctgacagag
gtccaatgccagtccaaacgactgaggaaagtaggtaaaagcagagcgcaagaagagaag
gagagcacagacagtcggagagtcagctctacctgtcggttacctggacagaatcagccc
gccattttgacccgggagcagaaatacactgtagacaggatggttgaggctcatcgccag
tttagggagcaagacagcagcagttacagggtctctgaatggcagtgtgctctggagggg
gcggggctgcctgatgttttatccccacacctaaacagactgctgcagtttgcaagaaca
gtaccaggttttgatctcctggatttctccgaccagatggccctcctgtccgtttcctct
ctggaggtcatgtttctgctctctgcccaacagttctccaataaccctgcaagccccact
ccagttttgcagcttttcaccacttcctcgcacggctggctcagaaatctggagcccagg
gaaaacttccagatgaggacgtccgtcggttcaggtgagctcctattcattgtagaacat
tttaccccggtttga
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